BLASTX nr result

ID: Ophiopogon27_contig00022636 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00022636
         (924 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251734.1| uncharacterized protein LOC109829069 [Aspara...    67   8e-09
ref|XP_008350478.1| PREDICTED: F-box protein SKIP23-like [Malus ...    60   2e-06
ref|XP_021641339.1| F-box protein SKIP23-like [Hevea brasiliensi...    59   6e-06
gb|OVA10871.1| Protein of unknown function DUF295 [Macleaya cord...    59   6e-06
ref|XP_004291318.1| PREDICTED: F-box protein SKIP23-like [Fragar...    58   8e-06

>ref|XP_020251734.1| uncharacterized protein LOC109829069 [Asparagus officinalis]
 gb|ONK78932.1| uncharacterized protein A4U43_C01F1130 [Asparagus officinalis]
          Length = 364

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 45/102 (44%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
 Frame = +2

Query: 2   VFEADFSNKRWVRLESLGD-RVLFIHKRFVCSLFADDIGAEGNCIYFTDPYKIEESSHQN 178
           V+ AD   K WV++ES+GD RV+ IH     SL A DIGA GNCIYF        ++ +N
Sbjct: 273 VYRADLDRKMWVKVESVGDNRVIVIHWVQSVSLLAADIGARGNCIYF--------ATGEN 324

Query: 179 SSRVGPIPWNVFNLDTGKLTESPLLYAP---TSDTLMFVPRL 295
           S   G  PW VF+L T K+T+  L  A        L+FVP L
Sbjct: 325 S---GQGPWKVFDLGTRKMTDLQLPSATQFRNLAQLLFVPSL 363


>ref|XP_008350478.1| PREDICTED: F-box protein SKIP23-like [Malus domestica]
          Length = 400

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   VFEADFSNKRWVRLESLGDRVLFIHKRFVCSLFADDI-GAEGNCIYFTDPYKIEESSHQN 178
           +F  +++ +RW ++E+LGDR++FI +    SL A D  G+ GNC+YFTD Y    S   N
Sbjct: 296 LFRMNWAGERWDKVENLGDRMVFIGENSSFSLSASDFPGSLGNCVYFTDDY----SESNN 351

Query: 179 SSRVGPIPWNVFNLDTGKLTESP 247
            S VG     +F L  G + E P
Sbjct: 352 ESGVGGYDSGIFKLWDGTIQELP 374


>ref|XP_021641339.1| F-box protein SKIP23-like [Hevea brasiliensis]
 ref|XP_021641340.1| F-box protein SKIP23-like [Hevea brasiliensis]
          Length = 396

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 35/83 (42%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   VFEADFSNKRWVRLESLGDRVLFIHKRFVCSLFADDI-GAEGNCIYFTDPYKIEESSHQN 178
           VF  D+S  RWVR+ SLGD+VLFI +    SL A D  G  GNCIY+TD Y    S    
Sbjct: 295 VFRLDWSGPRWVRVRSLGDKVLFIGENTSLSLSATDFSGCMGNCIYYTDDY----SDTNY 350

Query: 179 SSRVGPIPWNVFNLDTGKLTESP 247
               G     +F L  G +   P
Sbjct: 351 DGHFGEHDLGIFKLLDGSIEPLP 373


>gb|OVA10871.1| Protein of unknown function DUF295 [Macleaya cordata]
          Length = 397

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = +2

Query: 2   VFEADFSNKRWVRLESLGDRVLFI--HKRFVCSLFADDIGAEGNCIYFTDPYKIEESSHQ 175
           VF  D    +WV ++SLGDR+LF+      +C L  D  G EGNCIYFTD Y     +  
Sbjct: 298 VFSLDARKPKWVEVKSLGDRMLFLGGENSSLCLLATDFSGCEGNCIYFTDDY-----TEV 352

Query: 176 NSSRVGPIPWNVFNLDTGKLTESPLLYAPTSDTLMFVP 289
           N  + G     VFNL  G  +  PL Y  T  + +F P
Sbjct: 353 NEVKPGDHDMGVFNL--GDRSIKPLPYF-TGVSRLFYP 387


>ref|XP_004291318.1| PREDICTED: F-box protein SKIP23-like [Fragaria vesca subsp. vesca]
          Length = 398

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   VFEADFSNKRWVRLESLGDRVLFIHKRFVCSLFADDI-GAEGNCIYFTDPYKIEESSHQN 178
           VF  ++   RW ++E+LGDR+LFI +    SL A D  G  GNCIYFTD Y    S    
Sbjct: 294 VFRMNWMGPRWEKVENLGDRMLFIGENSSFSLSASDFPGCVGNCIYFTDDY----SELNY 349

Query: 179 SSRVGPIPWNVFNLDTGKLTESP 247
            S VG     +F L  G + E P
Sbjct: 350 ESGVGGYDSGIFRLRDGMIQELP 372


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