BLASTX nr result
ID: Ophiopogon27_contig00022365
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00022365
(386 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020274150.1| LOW QUALITY PROTEIN: RNA pseudouridine synth... 103 3e-23
ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chl... 79 2e-14
ref|XP_009382727.1| PREDICTED: RNA pseudouridine synthase 2, chl... 78 4e-14
ref|XP_008806148.1| PREDICTED: RNA pseudouridine synthase 2, chl... 76 1e-13
ref|XP_008806147.1| PREDICTED: RNA pseudouridine synthase 2, chl... 76 2e-13
ref|XP_008806145.1| PREDICTED: RNA pseudouridine synthase 2, chl... 76 2e-13
ref|XP_008806144.1| PREDICTED: RNA pseudouridine synthase 2, chl... 76 2e-13
ref|XP_020113503.1| RNA pseudouridine synthase 2, chloroplastic ... 75 2e-13
gb|OVA15944.1| RNA-binding S4 domain [Macleaya cordata] 75 5e-13
dbj|GAY42852.1| hypothetical protein CUMW_070100 [Citrus unshiu]... 74 8e-13
dbj|GAY42851.1| hypothetical protein CUMW_070100 [Citrus unshiu] 74 9e-13
ref|XP_020704971.1| RNA pseudouridine synthase 2, chloroplastic-... 73 2e-12
ref|XP_002439034.1| RNA pseudouridine synthase 2, chloroplastic ... 73 2e-12
ref|XP_020180196.1| RNA pseudouridine synthase 2, chloroplastic ... 72 3e-12
ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chl... 72 3e-12
ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chl... 72 3e-12
ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chl... 72 3e-12
ref|XP_011649466.1| PREDICTED: RNA pseudouridine synthase 2, chl... 72 4e-12
gb|PNX84583.1| RNA pseudourine synthase 2 chloroplastic-like, pa... 67 7e-12
ref|XP_015384244.1| PREDICTED: RNA pseudouridine synthase 2, chl... 71 8e-12
>ref|XP_020274150.1| LOW QUALITY PROTEIN: RNA pseudouridine synthase 2, chloroplastic
[Asparagus officinalis]
Length = 434
Score = 103 bits (256), Expect = 3e-23
Identities = 50/77 (64%), Positives = 55/77 (71%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLLKP RLQRPCLHAL LGFTHPHTG YL+FSCPPPDDFSE LSLL
Sbjct: 358 SLLKPRIPSNSHGHLSCMVSRLQRPCLHALSLGFTHPHTGVYLRFSCPPPDDFSEVLSLL 417
Query: 182 RSFPRQSAVSSDMEIEV 232
RSF +Q+ +SD E+EV
Sbjct: 418 RSFSQQTGENSDTELEV 434
>ref|XP_010935174.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Elaeis guineensis]
Length = 449
Score = 78.6 bits (192), Expect = 2e-14
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P +LQRPCLHA LGF HPHTGEYL+FSCPPPDDF+E L L
Sbjct: 384 SLLRPRTSSSHHGHLSQILSKLQRPCLHASSLGFKHPHTGEYLRFSCPPPDDFAEVLDQL 443
Query: 182 RS 187
+S
Sbjct: 444 QS 445
>ref|XP_009382727.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Musa acuminata subsp. malaccensis]
ref|XP_009382728.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Musa acuminata subsp. malaccensis]
Length = 440
Score = 77.8 bits (190), Expect = 4e-14
Identities = 35/62 (56%), Positives = 41/62 (66%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P +LQRPCLHA +GF HPHTGE+L+FSCPPPDDFS+ L L
Sbjct: 371 SLLRPRTPPTYHGHLSNIISKLQRPCLHAFSIGFKHPHTGEFLQFSCPPPDDFSKVLDQL 430
Query: 182 RS 187
RS
Sbjct: 431 RS 432
>ref|XP_008806148.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X5
[Phoenix dactylifera]
Length = 349
Score = 75.9 bits (185), Expect = 1e-13
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P ++QRPCLHA LGF HPHTGE+L+FSCPPPDDF+E L L
Sbjct: 284 SLLRPRTSSSHHGHLSQILSKVQRPCLHASLLGFKHPHTGEHLRFSCPPPDDFAEVLDQL 343
Query: 182 RS 187
+S
Sbjct: 344 QS 345
>ref|XP_008806147.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Phoenix dactylifera]
Length = 391
Score = 75.9 bits (185), Expect = 2e-13
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P ++QRPCLHA LGF HPHTGE+L+FSCPPPDDF+E L L
Sbjct: 326 SLLRPRTSSSHHGHLSQILSKVQRPCLHASLLGFKHPHTGEHLRFSCPPPDDFAEVLDQL 385
Query: 182 RS 187
+S
Sbjct: 386 QS 387
>ref|XP_008806145.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Phoenix dactylifera]
Length = 436
Score = 75.9 bits (185), Expect = 2e-13
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P ++QRPCLHA LGF HPHTGE+L+FSCPPPDDF+E L L
Sbjct: 371 SLLRPRTSSSHHGHLSQILSKVQRPCLHASLLGFKHPHTGEHLRFSCPPPDDFAEVLDQL 430
Query: 182 RS 187
+S
Sbjct: 431 QS 432
>ref|XP_008806144.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Phoenix dactylifera]
Length = 439
Score = 75.9 bits (185), Expect = 2e-13
Identities = 34/62 (54%), Positives = 41/62 (66%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P ++QRPCLHA LGF HPHTGE+L+FSCPPPDDF+E L L
Sbjct: 374 SLLRPRTSSSHHGHLSQILSKVQRPCLHASLLGFKHPHTGEHLRFSCPPPDDFAEVLDQL 433
Query: 182 RS 187
+S
Sbjct: 434 QS 435
>ref|XP_020113503.1| RNA pseudouridine synthase 2, chloroplastic isoform X1 [Ananas
comosus]
gb|OAY68405.1| RNA pseudouridine synthase 2, chloroplastic [Ananas comosus]
Length = 430
Score = 75.5 bits (184), Expect = 2e-13
Identities = 35/61 (57%), Positives = 39/61 (63%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLLKP +L RPCLHAL LGF HP TGE+L+FSCPPPDDFSE + L
Sbjct: 360 SLLKPRTPSSHHGHLSHMISKLDRPCLHALSLGFEHPQTGEFLRFSCPPPDDFSEVVDQL 419
Query: 182 R 184
R
Sbjct: 420 R 420
>gb|OVA15944.1| RNA-binding S4 domain [Macleaya cordata]
Length = 458
Score = 74.7 bits (182), Expect = 5e-13
Identities = 35/67 (52%), Positives = 42/67 (62%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P +L+RPCLHA LGF HPHTGE + FSCPPP DF+E LSLL
Sbjct: 377 SLLRPKTPSNNHGHLSELVNKLERPCLHAFTLGFKHPHTGEVVNFSCPPPADFTEILSLL 436
Query: 182 RSFPRQS 202
R+ + S
Sbjct: 437 RNIKKIS 443
>dbj|GAY42852.1| hypothetical protein CUMW_070100 [Citrus unshiu]
dbj|GAY42853.1| hypothetical protein CUMW_070100 [Citrus unshiu]
Length = 421
Score = 73.9 bits (180), Expect = 8e-13
Identities = 36/71 (50%), Positives = 43/71 (60%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P LQRPCLHA+ LGFTHPHTGE ++FSCPPP DF+E LS L
Sbjct: 351 SLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTGEKIQFSCPPPADFAEILSQL 410
Query: 182 RSFPRQSAVSS 214
R + S+
Sbjct: 411 REIGTEKLSSN 421
>dbj|GAY42851.1| hypothetical protein CUMW_070100 [Citrus unshiu]
Length = 436
Score = 73.9 bits (180), Expect = 9e-13
Identities = 36/71 (50%), Positives = 43/71 (60%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P LQRPCLHA+ LGFTHPHTGE ++FSCPPP DF+E LS L
Sbjct: 366 SLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTGEKIQFSCPPPADFAEILSQL 425
Query: 182 RSFPRQSAVSS 214
R + S+
Sbjct: 426 REIGTEKLSSN 436
>ref|XP_020704971.1| RNA pseudouridine synthase 2, chloroplastic-like isoform X1
[Dendrobium catenatum]
Length = 437
Score = 73.2 bits (178), Expect = 2e-12
Identities = 35/62 (56%), Positives = 39/62 (62%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLLK +LQRPCLHA LGF HPHTGE+L FSCPPPDDF+E L L
Sbjct: 362 SLLKSRTPMSCHALVSDMVSKLQRPCLHAQSLGFKHPHTGEHLHFSCPPPDDFTEILHQL 421
Query: 182 RS 187
R+
Sbjct: 422 RT 423
>ref|XP_002439034.1| RNA pseudouridine synthase 2, chloroplastic [Sorghum bicolor]
gb|EER90401.1| hypothetical protein SORBI_3010G268100 [Sorghum bicolor]
Length = 441
Score = 72.8 bits (177), Expect = 2e-12
Identities = 34/72 (47%), Positives = 41/72 (56%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P ++ RPCLHA LGF HPH+G+ L+FSCPPPDDFSE L L
Sbjct: 367 SLLRPRTPSKYHSDLSNLISKVDRPCLHAALLGFKHPHSGKILEFSCPPPDDFSEVLDEL 426
Query: 182 RSFPRQSAVSSD 217
R A + D
Sbjct: 427 RKVTSSDAQNGD 438
>ref|XP_020180196.1| RNA pseudouridine synthase 2, chloroplastic [Aegilops tauschii
subsp. tauschii]
Length = 442
Score = 72.4 bits (176), Expect = 3e-12
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P ++ RPCLHA LGF HPH+GE L+FSCPPPDDF+E L L
Sbjct: 365 SLLRPRTPSKYHGDLSNLVSKIDRPCLHAALLGFKHPHSGEALEFSCPPPDDFTEVLDQL 424
Query: 182 RSF-PRQSAVSSDMEIEV 232
R P SD +V
Sbjct: 425 RRVTPTSDGQDSDSAAQV 442
>ref|XP_010241330.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Nelumbo nucifera]
Length = 443
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 62 RLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLLRS 187
+LQRPCLHA LGF HPHTGE ++FSCPPP DF+E LS LRS
Sbjct: 393 KLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRS 434
>ref|XP_010241329.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Nelumbo nucifera]
Length = 453
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 62 RLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLLRS 187
+LQRPCLHA LGF HPHTGE ++FSCPPP DF+E LS LRS
Sbjct: 393 KLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRS 434
>ref|XP_010241328.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Nelumbo nucifera]
Length = 471
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 62 RLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLLRS 187
+LQRPCLHA LGF HPHTGE ++FSCPPP DF+E LS LRS
Sbjct: 393 KLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRS 434
>ref|XP_011649466.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Cucumis sativus]
Length = 430
Score = 72.0 bits (175), Expect = 4e-12
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2
Query: 65 LQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLLRSFPRQSAVSS 214
L+RPCLHAL LGF HPHTG+ ++FSCPPP DF+E LS LR Q S
Sbjct: 381 LERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREIGTQKVTKS 430
>gb|PNX84583.1| RNA pseudourine synthase 2 chloroplastic-like, partial [Trifolium
pratense]
Length = 115
Score = 67.4 bits (163), Expect = 7e-12
Identities = 33/61 (54%), Positives = 36/61 (59%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P L RPCLHAL LGF HPHTGE + FSC PP DF+E LS L
Sbjct: 27 SLLRPRTTASLHSEMFKVVSELDRPCLHALTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 86
Query: 182 R 184
R
Sbjct: 87 R 87
>ref|XP_015384244.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Citrus sinensis]
Length = 338
Score = 70.9 bits (172), Expect = 8e-12
Identities = 35/71 (49%), Positives = 42/71 (59%)
Frame = +2
Query: 2 SLLKPXXXXXXXXXXXXXXXRLQRPCLHALYLGFTHPHTGEYLKFSCPPPDDFSEALSLL 181
SLL+P LQRPCLHA+ LGFTHPHT E ++FSCPPP DF+E LS L
Sbjct: 268 SLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQL 327
Query: 182 RSFPRQSAVSS 214
R + S+
Sbjct: 328 REIGTEKLSSN 338