BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00021848
         (1076 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010916569.2| PREDICTED: RNA polymerase II transcription f...   178   5e-48
ref|XP_008802071.1| PREDICTED: RNA polymerase II transcription f...   173   3e-46
ref|XP_008802068.1| PREDICTED: RNA polymerase II transcription f...   173   4e-46
ref|XP_009409177.1| PREDICTED: RNA polymerase II transcription f...   158   6e-42
ref|XP_020678107.1| RNA polymerase II transcription factor B sub...   155   7e-41
ref|XP_008802070.1| PREDICTED: RNA polymerase II transcription f...   159   9e-41
emb|CBI19033.3| unnamed protein product, partial [Vitis vinifera]     152   6e-40
ref|XP_002284465.2| PREDICTED: RNA polymerase II transcription f...   152   7e-40
ref|XP_022768204.1| RNA polymerase II transcription factor B sub...   152   9e-40
ref|XP_020578476.1| RNA polymerase II transcription factor B sub...   151   2e-39
gb|EOY16262.1| Basal transcription factor complex subunit-relate...   149   4e-39
gb|PKA49129.1| hypothetical protein AXF42_Ash010814 [Apostasia s...   149   5e-39
gb|EOY16261.1| Basal transcription factor complex subunit-relate...   149   7e-39
ref|XP_015885697.1| PREDICTED: RNA polymerase II transcription f...   149   9e-39
gb|PNT37223.1| hypothetical protein POPTR_005G176600v3 [Populus ...   148   1e-38
ref|XP_021284095.1| RNA polymerase II transcription factor B sub...   149   1e-38
gb|ESR47414.1| hypothetical protein CICLE_v100020021mg, partial ...   145   1e-38
ref|XP_010999372.1| PREDICTED: general transcription factor IIH ...   148   2e-38
ref|XP_010999370.1| PREDICTED: general transcription factor IIH ...   148   2e-38
ref|XP_002307429.2| basal transcription factor complex subunit-r...   148   2e-38

>ref|XP_010916569.2| PREDICTED: RNA polymerase II transcription factor B subunit 4 [Elaeis
            guineensis]
          Length = 486

 Score =  178 bits (452), Expect = 5e-48
 Identities = 102/182 (56%), Positives = 111/182 (60%), Gaps = 9/182 (4%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGG---------AATISFAKFLNHVIPFXXXXXX 708
            M  APSK               NPFFW G         AAT+ FAKFLNHVIPF      
Sbjct: 1    MNSAPSKLYTDDVSLVVVLLDANPFFWAGGGGTSPHHPAATLPFAKFLNHVIPFLNSVLL 60

Query: 709  XXXXXXVVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKE 888
                  VV+IATGVNSCGYIYDS GG  GS  G +  VCSEIL+K+EEFV  D +++ K 
Sbjct: 61   LNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRKVEEFVAKD-RRLGKG 117

Query: 889  KDRVVXXXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIF 1068
             DRVV                CYIQRVFRSGALHPQPRILCL GSPDGPEQYVAVMN+IF
Sbjct: 118  PDRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQGSPDGPEQYVAVMNAIF 177

Query: 1069 SA 1074
            SA
Sbjct: 178  SA 179


>ref|XP_008802071.1| PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform
            X3 [Phoenix dactylifera]
 ref|XP_008802073.1| PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform
            X3 [Phoenix dactylifera]
          Length = 459

 Score =  173 bits (438), Expect = 3e-46
 Identities = 102/185 (55%), Positives = 111/185 (60%), Gaps = 12/185 (6%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFW-----GG-------AATISFAKFLNHVIPFXXX 699
            M  APSK               NPFFW     GG       AAT+ FAKFLNHVIPF   
Sbjct: 1    MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 700  XXXXXXXXXVVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKV 879
                     VV+IATGVNSCGYIYDS GG  GS  G +  VCSEIL++LEEFV  D +++
Sbjct: 61   VLLLNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRRLEEFVAKD-RRL 117

Query: 880  VKEKDRVVXXXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMN 1059
             K  DRVV                CYIQRVFRSGALHPQPRILCL  SPDGPEQYVAVMN
Sbjct: 118  GKGPDRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQASPDGPEQYVAVMN 177

Query: 1060 SIFSA 1074
            +IFSA
Sbjct: 178  AIFSA 182


>ref|XP_008802068.1| PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform
            X1 [Phoenix dactylifera]
 ref|XP_008802069.1| PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform
            X1 [Phoenix dactylifera]
          Length = 475

 Score =  173 bits (438), Expect = 4e-46
 Identities = 102/185 (55%), Positives = 111/185 (60%), Gaps = 12/185 (6%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFW-----GG-------AATISFAKFLNHVIPFXXX 699
            M  APSK               NPFFW     GG       AAT+ FAKFLNHVIPF   
Sbjct: 1    MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 700  XXXXXXXXXVVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKV 879
                     VV+IATGVNSCGYIYDS GG  GS  G +  VCSEIL++LEEFV  D +++
Sbjct: 61   VLLLNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRRLEEFVAKD-RRL 117

Query: 880  VKEKDRVVXXXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMN 1059
             K  DRVV                CYIQRVFRSGALHPQPRILCL  SPDGPEQYVAVMN
Sbjct: 118  GKGPDRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQASPDGPEQYVAVMN 177

Query: 1060 SIFSA 1074
            +IFSA
Sbjct: 178  AIFSA 182


>ref|XP_009409177.1| PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform
            X1 [Musa acuminata subsp. malaccensis]
 ref|XP_009409178.1| PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform
            X1 [Musa acuminata subsp. malaccensis]
 ref|XP_018683984.1| PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform
            X1 [Musa acuminata subsp. malaccensis]
          Length = 314

 Score =  158 bits (399), Expect = 6e-42
 Identities = 90/184 (48%), Positives = 102/184 (55%), Gaps = 14/184 (7%)
 Frame = +1

Query: 565  APSKXXXXXXXXXXXXXXXNPFFWGGAA--------------TISFAKFLNHVIPFXXXX 702
            APSK               NPFFW  +A              T+ F+K LNHVIP     
Sbjct: 6    APSKLYSDDVSLIVVLLDANPFFWASSAAAAGDSASSHHPTTTLPFSKLLNHVIPLLNSL 65

Query: 703  XXXXXXXXVVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVV 882
                    VV++ATGVNSCGYIYDS  G  GS  G +  +CSEIL++LEEFV  D  +  
Sbjct: 66   LLLNQLNQVVLVATGVNSCGYIYDSGDGGGGSACGSVPAICSEILRRLEEFVVKDRLQG- 124

Query: 883  KEKDRVVXXXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNS 1062
            K  D+VV                CYIQRVFRS A HPQPRILCL GSPDGPEQYVAVMN+
Sbjct: 125  KSPDKVVATGVSSLLSGSLSLALCYIQRVFRSRARHPQPRILCLQGSPDGPEQYVAVMNA 184

Query: 1063 IFSA 1074
            IFSA
Sbjct: 185  IFSA 188


>ref|XP_020678107.1| RNA polymerase II transcription factor B subunit 4 isoform X1
            [Dendrobium catenatum]
 gb|PKU85560.1| hypothetical protein MA16_Dca003300 [Dendrobium catenatum]
          Length = 302

 Score =  155 bits (391), Expect = 7e-41
 Identities = 90/182 (49%), Positives = 110/182 (60%), Gaps = 9/182 (4%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFW-----GG---AATISFAKFLNHVIPFXXXXXXX 711
            M  APSK               NPFFW     GG   AAT+ F+KFL+HVIPF       
Sbjct: 1    MASAPSKLYSDDVSLVVVLLDANPFFWAAGAGGGNHPAATLPFSKFLDHVIPFLNSLLLM 60

Query: 712  XXXXXVVVIATGVNSCGYIYDS-EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKE 888
                 VV+IATG+N+CGYIYDS  GG +GS+   ++ + SEIL +LEEFV  D +K+ K 
Sbjct: 61   NQLNQVVLIATGINTCGYIYDSGNGGPEGSD--NVSEISSEILLRLEEFVCKD-RKIGKG 117

Query: 889  KDRVVXXXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIF 1068
             +R +                CY+Q+VFRSGA+HPQPRILCL  SPDGPEQYVAVMN+IF
Sbjct: 118  TERAMGGSVSSLLSGSLSLALCYVQKVFRSGAIHPQPRILCLQASPDGPEQYVAVMNAIF 177

Query: 1069 SA 1074
            SA
Sbjct: 178  SA 179


>ref|XP_008802070.1| PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform
            X2 [Phoenix dactylifera]
          Length = 470

 Score =  159 bits (401), Expect = 9e-41
 Identities = 98/185 (52%), Positives = 107/185 (57%), Gaps = 12/185 (6%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFW-----GG-------AATISFAKFLNHVIPFXXX 699
            M  APSK               NPFFW     GG       AAT+ FAKFLNHVIPF   
Sbjct: 1    MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 700  XXXXXXXXXVVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKV 879
                     VV+IATGVNSCGYIYDS GG  GS  G +  VCSEIL++LEEFV  D +++
Sbjct: 61   VLLLNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRRLEEFVAKD-RRL 117

Query: 880  VKEKDRVVXXXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMN 1059
             K  DRVV                CYIQRVFRSGALHPQPR      SPDGPEQYVAVMN
Sbjct: 118  GKGPDRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPR-----ASPDGPEQYVAVMN 172

Query: 1060 SIFSA 1074
            +IFSA
Sbjct: 173  AIFSA 177


>emb|CBI19033.3| unnamed protein product, partial [Vitis vinifera]
          Length = 297

 Score =  152 bits (384), Expect = 6e-40
 Identities = 85/175 (48%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M P PSK               NPFFW   A++ F+KFL+HV+ F            VVV
Sbjct: 1    MAPVPSKLYSDDVSLLVVLLDTNPFFWS-TASLPFSKFLSHVLAFLNSILLINQLNQVVV 59

Query: 736  IATGVNSCGYIYDSEG--GHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 909
            IATG NSC +I+DS     +   E G+M  +CS +LQKLEEFV GD K     K+ +   
Sbjct: 60   IATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKL---SKEVLAAG 116

Query: 910  XXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                          CYIQRVFR+G LHPQPRILCL GSPDGPEQYVAVMN+IFSA
Sbjct: 117  IGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 171


>ref|XP_002284465.2| PREDICTED: RNA polymerase II transcription factor B subunit 4 [Vitis
            vinifera]
          Length = 303

 Score =  152 bits (384), Expect = 7e-40
 Identities = 85/175 (48%), Positives = 100/175 (57%), Gaps = 2/175 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M P PSK               NPFFW   A++ F+KFL+HV+ F            VVV
Sbjct: 7    MAPVPSKLYSDDVSLLVVLLDTNPFFWS-TASLPFSKFLSHVLAFLNSILLINQLNQVVV 65

Query: 736  IATGVNSCGYIYDSEG--GHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 909
            IATG NSC +I+DS     +   E G+M  +CS +LQKLEEFV GD K     K+ +   
Sbjct: 66   IATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKL---SKEVLAAG 122

Query: 910  XXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                          CYIQRVFR+G LHPQPRILCL GSPDGPEQYVAVMN+IFSA
Sbjct: 123  IGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 177


>ref|XP_022768204.1| RNA polymerase II transcription factor B subunit 4-like isoform X3
            [Durio zibethinus]
          Length = 296

 Score =  152 bits (383), Expect = 9e-40
 Identities = 85/174 (48%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M PAPSK               NPFFW  ++++SF++FL+HV+ F            VVV
Sbjct: 1    MAPAPSKLYADDVSLVVVLLDTNPFFWS-SSSLSFSQFLSHVLAFFNAILTLNQLNQVVV 59

Query: 736  IATGVNSCGYIYDSEGG-HQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXXX 912
            IATG NSC YI+DS    ++  E G+M V+CS +LQKLEEF+  D +   +E D  +   
Sbjct: 60   IATGYNSCDYIFDSSSDLNRSFENGRMPVMCSSLLQKLEEFLIKDEQFSKEEPDGRIKSS 119

Query: 913  XXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                         CYIQRVFRSGALHP PRILCL GSPDGPEQYVA+MN+IFSA
Sbjct: 120  LLSGSLSMAL---CYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSA 170


>ref|XP_020578476.1| RNA polymerase II transcription factor B subunit 4 isoform X1
            [Phalaenopsis equestris]
          Length = 301

 Score =  151 bits (381), Expect = 2e-39
 Identities = 89/183 (48%), Positives = 107/183 (58%), Gaps = 10/183 (5%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFW-------GG---AATISFAKFLNHVIPFXXXXX 705
            M  APSK               NPFFW       GG   AA ++FAKFL+HVIPF     
Sbjct: 1    MASAPSKLYSDDVSLVAVLLDVNPFFWAASAGAGGGNHTAAALTFAKFLDHVIPFLNSLL 60

Query: 706  XXXXXXXVVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVK 885
                   VV+IATG+NSCGYIYDS      S+  K++ V SE+L++L EFV  D ++VVK
Sbjct: 61   LMNQLNQVVLIATGINSCGYIYDSGSSLDVSD--KVSEVSSEVLRRLGEFVYKD-RRVVK 117

Query: 886  EKDRVVXXXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSI 1065
              +  +                CYIQ+VFRSGA+HPQPRILCL  SPDGPEQYVAVMN+I
Sbjct: 118  GAESAMGSNVTSLLSGSLSLALCYIQKVFRSGAIHPQPRILCLQASPDGPEQYVAVMNAI 177

Query: 1066 FSA 1074
            FSA
Sbjct: 178  FSA 180


>gb|EOY16262.1| Basal transcription factor complex subunit-related isoform 2
            [Theobroma cacao]
          Length = 274

 Score =  149 bits (377), Expect = 4e-39
 Identities = 87/176 (49%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M  APSK               NPFFW  A+++SF++FL+HV+ F            VVV
Sbjct: 1    MASAPSKLYADDVSLVVVLVDTNPFFWS-ASSLSFSQFLSHVLAFLNAILTLNQLNQVVV 59

Query: 736  IATGVNSCGYIYDSEGG-HQGSEVGKMAVVCSEILQKLEEFVEGD--MKKVVKEKDRVVX 906
            IATG NSC YI+DS    +Q  E G+M V+CS +LQKLEEF+  D  + K V E      
Sbjct: 60   IATGYNSCNYIFDSSSDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPE-----G 114

Query: 907  XXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                           CYIQRVFRSGALHP PRILCL GSPDGPEQYVA+MN+IFSA
Sbjct: 115  RIKSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSA 170


>gb|PKA49129.1| hypothetical protein AXF42_Ash010814 [Apostasia shenzhenica]
          Length = 281

 Score =  149 bits (377), Expect = 5e-39
 Identities = 94/182 (51%), Positives = 105/182 (57%), Gaps = 9/182 (4%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFW-----GG---AATISFAKFLNHVIPFXXXXXXX 711
            M  APSK               NPFFW     GG   AAT+ F+KFL HVIPF       
Sbjct: 1    MSSAPSKLYADDVSLVVVLLDVNPFFWAAGASGGNHPAATLPFSKFLKHVIPFLNSLLLL 60

Query: 712  XXXXXVVVIATGVNSCGYIYDSEGGHQGSEVG-KMAVVCSEILQKLEEFVEGDMKKVVKE 888
                 VV+IATG NSCGYIYDS  G  GSE   ++  V SEIL+ L EFVE D +KV + 
Sbjct: 61   NQLNRVVLIATGTNSCGYIYDS--GSSGSEGNNRVPKVYSEILRNLAEFVEND-RKVGRG 117

Query: 889  KDRVVXXXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIF 1068
             +RV                 CYIQRVFRSG +HPQPRILCL  SPDGPEQYVAVMN+IF
Sbjct: 118  PERVASSVPSLLSGSLSLAL-CYIQRVFRSGPIHPQPRILCLQASPDGPEQYVAVMNAIF 176

Query: 1069 SA 1074
            SA
Sbjct: 177  SA 178


>gb|EOY16261.1| Basal transcription factor complex subunit-related isoform 1
            [Theobroma cacao]
          Length = 296

 Score =  149 bits (377), Expect = 7e-39
 Identities = 87/176 (49%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M  APSK               NPFFW  A+++SF++FL+HV+ F            VVV
Sbjct: 1    MASAPSKLYADDVSLVVVLVDTNPFFWS-ASSLSFSQFLSHVLAFLNAILTLNQLNQVVV 59

Query: 736  IATGVNSCGYIYDSEGG-HQGSEVGKMAVVCSEILQKLEEFVEGD--MKKVVKEKDRVVX 906
            IATG NSC YI+DS    +Q  E G+M V+CS +LQKLEEF+  D  + K V E      
Sbjct: 60   IATGYNSCNYIFDSSSDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPE-----G 114

Query: 907  XXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                           CYIQRVFRSGALHP PRILCL GSPDGPEQYVA+MN+IFSA
Sbjct: 115  RIKSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSA 170


>ref|XP_015885697.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
            [Ziziphus jujuba]
 ref|XP_015867094.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
            [Ziziphus jujuba]
 ref|XP_015867095.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
            [Ziziphus jujuba]
 ref|XP_015867096.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
            [Ziziphus jujuba]
          Length = 295

 Score =  149 bits (376), Expect = 9e-39
 Identities = 82/152 (53%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
 Frame = +1

Query: 622  NPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVVIATGVNSCGYIYDSE-GGHQGS 798
            NPFFW   +++ F+KFL+HV+ F            VVVIATG NSC YIYDS      GS
Sbjct: 23   NPFFWT-TSSLPFSKFLSHVLSFLNSIMLLNQFNQVVVIATGYNSCDYIYDSSLATDHGS 81

Query: 799  EVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXXXXXXXXXXXXXXXXCYIQRVFRS 978
            E GKM  +CS +LQKLEEFV  D ++    KD                   CYIQ+VFRS
Sbjct: 82   ENGKMPALCSNLLQKLEEFVIRDQQQ---RKDGSGEGLPSSLLSGSLSMALCYIQKVFRS 138

Query: 979  GALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
            G LHPQPRILCL GSPDGPEQYVA+MN+IFSA
Sbjct: 139  GPLHPQPRILCLQGSPDGPEQYVAIMNAIFSA 170


>gb|PNT37223.1| hypothetical protein POPTR_005G176600v3 [Populus trichocarpa]
          Length = 275

 Score =  148 bits (374), Expect = 1e-38
 Identities = 83/175 (47%), Positives = 101/175 (57%), Gaps = 2/175 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M   PSK               NPFFW   +++SF++FL+HV+ F            VVV
Sbjct: 1    MTSVPSKLYSDDVSLVVVLLDTNPFFWTPPSSLSFSQFLSHVLAFVNSILLLNQLNQVVV 60

Query: 736  IATGVNSCGYIYDS--EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 909
            IA+G N+C YIYDS  +    GSE G+M  + S +LQKLEEF+  D K   ++  R +  
Sbjct: 61   IASGYNTCDYIYDSSSDASQLGSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 910  XXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                          CYIQRVFRSG LHPQPRILCL GSPDGPEQYVAVMN+IFSA
Sbjct: 121  SLLSGSLSMAL---CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 172


>ref|XP_021284095.1| RNA polymerase II transcription factor B subunit 4 isoform X2
            [Herrania umbratica]
          Length = 296

 Score =  149 bits (375), Expect = 1e-38
 Identities = 87/176 (49%), Positives = 103/176 (58%), Gaps = 3/176 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M  APSK               NPFFW  A+++SF++FL+HV+ F            VVV
Sbjct: 1    MASAPSKLYADDVSLVVVLVDTNPFFWR-ASSLSFSQFLSHVLAFLNAILTLNQLNQVVV 59

Query: 736  IATGVNSCGYIYDSEGG-HQGSEVGKMAVVCSEILQKLEEFVEGD--MKKVVKEKDRVVX 906
            IATG NSC YI+DS    +Q  E G+M V+CS +LQKLEEF+  D  + K V E      
Sbjct: 60   IATGYNSCNYIFDSSSDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPE-----G 114

Query: 907  XXXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                           CYIQRVFRSGALHP PRILCL GSPDGPEQYVA+MN+IFSA
Sbjct: 115  RIKSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSA 170


>gb|ESR47414.1| hypothetical protein CICLE_v100020021mg, partial [Citrus clementina]
          Length = 174

 Score =  145 bits (365), Expect = 1e-38
 Identities = 81/174 (46%), Positives = 101/174 (58%), Gaps = 1/174 (0%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M  APSK               NPFFW  ++++SF++FL HV+ F            VVV
Sbjct: 1    MASAPSKLYSDDVSLVVVLLDTNPFFWS-SSSLSFSQFLTHVLAFLNAILTLNQLNQVVV 59

Query: 736  IATGVNSCGYIYDSEG-GHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXXX 912
            IATG NSC Y+YDS   G+Q    G+M  +C+ +LQ LEEF+  D +   +E +  +   
Sbjct: 60   IATGYNSCDYVYDSSSTGNQSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEGRIACS 119

Query: 913  XXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                         CYIQRVFRSG LHPQPRILCL GSPDGPEQYVA+MN+IFSA
Sbjct: 120  LLSGSLSMAL---CYIQRVFRSGLLHPQPRILCLQGSPDGPEQYVAIMNAIFSA 170


>ref|XP_010999372.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
            [Populus euphratica]
          Length = 295

 Score =  148 bits (374), Expect = 2e-38
 Identities = 82/175 (46%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M   PSK               NPFFW  ++++SF++FL+HV+ F            VVV
Sbjct: 1    MTSVPSKLYSDDVSLLVVLLDTNPFFWTASSSLSFSQFLSHVLAFVNSILLLNQLNQVVV 60

Query: 736  IATGVNSCGYIYDS--EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 909
            IA+G N+C YIYDS  +    GSE G++  + S +LQKLEEF+  D K   ++  R +  
Sbjct: 61   IASGYNTCDYIYDSSSDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 910  XXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                          CYIQRVFRSG LHPQPRILCL GSPDGPEQYVAVMN+IFSA
Sbjct: 121  SLLSGSLSMAL---CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 172


>ref|XP_010999370.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
            [Populus euphratica]
 ref|XP_010999371.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
            [Populus euphratica]
          Length = 298

 Score =  148 bits (374), Expect = 2e-38
 Identities = 82/175 (46%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M   PSK               NPFFW  ++++SF++FL+HV+ F            VVV
Sbjct: 1    MTSVPSKLYSDDVSLLVVLLDTNPFFWTASSSLSFSQFLSHVLAFVNSILLLNQLNQVVV 60

Query: 736  IATGVNSCGYIYDS--EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 909
            IA+G N+C YIYDS  +    GSE G++  + S +LQKLEEF+  D K   ++  R +  
Sbjct: 61   IASGYNTCDYIYDSSSDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 910  XXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                          CYIQRVFRSG LHPQPRILCL GSPDGPEQYVAVMN+IFSA
Sbjct: 121  SLLSGSLSMAL---CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 172


>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
            [Populus trichocarpa]
 gb|PNT37221.1| hypothetical protein POPTR_005G176600v3 [Populus trichocarpa]
 gb|PNT37222.1| hypothetical protein POPTR_005G176600v3 [Populus trichocarpa]
 gb|PNT37224.1| hypothetical protein POPTR_005G176600v3 [Populus trichocarpa]
          Length = 298

 Score =  148 bits (374), Expect = 2e-38
 Identities = 83/175 (47%), Positives = 101/175 (57%), Gaps = 2/175 (1%)
 Frame = +1

Query: 556  MIPAPSKXXXXXXXXXXXXXXXNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXXVVV 735
            M   PSK               NPFFW   +++SF++FL+HV+ F            VVV
Sbjct: 1    MTSVPSKLYSDDVSLVVVLLDTNPFFWTPPSSLSFSQFLSHVLAFVNSILLLNQLNQVVV 60

Query: 736  IATGVNSCGYIYDS--EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 909
            IA+G N+C YIYDS  +    GSE G+M  + S +LQKLEEF+  D K   ++  R +  
Sbjct: 61   IASGYNTCDYIYDSSSDASQLGSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 910  XXXXXXXXXXXXXXCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSA 1074
                          CYIQRVFRSG LHPQPRILCL GSPDGPEQYVAVMN+IFSA
Sbjct: 121  SLLSGSLSMAL---CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 172