BLASTX nr result

ID: Ophiopogon27_contig00021841 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00021841
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267398.1| transcription factor bHLH49-like isoform X1 ...    96   4e-20
ref|XP_020250537.1| transcription factor bHLH49-like [Asparagus ...    72   7e-12

>ref|XP_020267398.1| transcription factor bHLH49-like isoform X1 [Asparagus officinalis]
 ref|XP_020267399.1| transcription factor bHLH49-like isoform X1 [Asparagus officinalis]
          Length = 428

 Score = 95.5 bits (236), Expect = 4e-20
 Identities = 51/103 (49%), Positives = 58/103 (56%), Gaps = 15/103 (14%)
 Frame = +3

Query: 204 MSGDHLNHQNSPSSAAAADWQFGN---------------QYIMTDSFYLNPWNNPSIPQN 338
           MSGDHLNH NSP+     DWQFG+               Q  M +SFY NPWNNP+ PQN
Sbjct: 1   MSGDHLNHHNSPN-----DWQFGSPLMYQGIQMASSSCPQVSMPESFYTNPWNNPTNPQN 55

Query: 339 PGFAENVGKXXXXXXXXXXXXDMGMFLPTANPGTLPPSIADFP 467
            GFA+                DMGMFLPT NPG LPPS++DFP
Sbjct: 56  SGFADGNAAIGKSAPLPPPRLDMGMFLPT-NPGMLPPSLSDFP 97


>ref|XP_020250537.1| transcription factor bHLH49-like [Asparagus officinalis]
 gb|ONK55018.1| uncharacterized protein A4U43_UnF8490 [Asparagus officinalis]
          Length = 417

 Score = 72.4 bits (176), Expect = 7e-12
 Identities = 49/118 (41%), Positives = 58/118 (49%), Gaps = 29/118 (24%)
 Frame = +3

Query: 204 MSGDHLNHQNSPSSAAAADWQFGN---------------------------QYIMTDSFY 302
           MS DHLNHQNSPS   +A+WQ+GN                           Q  M +SFY
Sbjct: 1   MSRDHLNHQNSPSD--SANWQYGNSSMNMPLPNSSLPMYQGIQMAPSSSCPQVSMAESFY 58

Query: 303 LNPWNNP--SIPQNPGFAENVGKXXXXXXXXXXXXDMGMFLPTANPGTLPPSIADFPA 470
            NPWNNP  S+P        +GK            DMGMFLP ANPG L PS++DFP+
Sbjct: 59  PNPWNNPNNSVP--------IGK----PIPLSQRLDMGMFLP-ANPGVLHPSLSDFPS 103


Top