BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00021742
         (2658 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264489.1| LOW QUALITY PROTEIN: probable RNA-dependent ...  1436   0.0  
gb|ONK69464.1| uncharacterized protein A4U43_C05F23220 [Asparagu...  1436   0.0  
ref|XP_019703492.1| PREDICTED: probable RNA-dependent RNA polyme...  1187   0.0  
ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polyme...  1185   0.0  
ref|XP_020110295.1| probable RNA-dependent RNA polymerase 2 [Ana...  1165   0.0  
gb|OAY66642.1| putative RNA-dependent RNA polymerase 2 [Ananas c...  1156   0.0  
ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polyme...  1121   0.0  
gb|OVA03721.1| RNA recognition motif domain [Macleaya cordata]       1080   0.0  
ref|XP_020701436.1| probable RNA-dependent RNA polymerase 2 [Den...  1067   0.0  
ref|XP_021674490.1| RNA-dependent RNA polymerase 2 [Hevea brasil...  1065   0.0  
ref|XP_015581229.1| PREDICTED: RNA-dependent RNA polymerase 2 is...  1063   0.0  
ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 is...  1063   0.0  
gb|PON93354.1| RNA-dependent RNA polymerase-type [Trema orientalis]  1060   0.0  
ref|XP_021591741.1| RNA-dependent RNA polymerase 2 [Manihot escu...  1060   0.0  
ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...  1059   0.0  
gb|PKA52670.1| putative RNA-dependent RNA polymerase 2 [Apostasi...  1058   0.0  
ref|XP_007211312.1| RNA-dependent RNA polymerase 2 [Prunus persi...  1057   0.0  
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen...  1053   0.0  
ref|XP_018831642.1| PREDICTED: RNA-dependent RNA polymerase 2 [J...  1051   0.0  
ref|XP_021825973.1| RNA-dependent RNA polymerase 2 isoform X1 [P...  1049   0.0  

>ref|XP_020264489.1| LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase 2
            [Asparagus officinalis]
          Length = 1120

 Score = 1436 bits (3717), Expect = 0.0
 Identities = 714/885 (80%), Positives = 787/885 (88%)
 Frame = +2

Query: 2    PDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIIN 181
            PDFSATSVIGRS +LCLELANGLS+SKI+K+LPFFGELGNL+L  GE   SSSKLVPI+N
Sbjct: 224  PDFSATSVIGRSYYLCLELANGLSSSKIIKSLPFFGELGNLMLMPGEVFCSSSKLVPILN 283

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            CP DCTV YEVLFQLNSLVH+QKISSA++NS+LF VLS LS DT  +ILM MHKLNSTC+
Sbjct: 284  CPGDCTVSYEVLFQLNSLVHLQKISSAHVNSNLFSVLSQLSSDTAIKILMMMHKLNSTCH 343

Query: 362  RPLYFIHDNLSRFGKQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKHY 541
            +P+YFI ++LSRFGKQQSLSS+ N  QE LMSCRRVL+TPSKVYFLGPELET NY+VKH+
Sbjct: 344  KPIYFIQNHLSRFGKQQSLSSDGNR-QEKLMSCRRVLITPSKVYFLGPELETSNYVVKHF 402

Query: 542  SAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKK 721
            SAYASDFLRVTF DEDRCKLP +AIS RI KDIFSK YRTGIYNR+L+VLRDGISIGSKK
Sbjct: 403  SAYASDFLRVTFVDEDRCKLPSQAISTRIGKDIFSKPYRTGIYNRILSVLRDGISIGSKK 462

Query: 722  FEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPT 901
            FEFLAFSASQLRD+S WMFASND VTA+ IREWMGQF+EIYSVSKCAARMGQLFSSSTPT
Sbjct: 463  FEFLAFSASQLRDSSIWMFASNDFVTASSIREWMGQFNEIYSVSKCAARMGQLFSSSTPT 522

Query: 902  FNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGY 1081
            FNVPS +V+VIPDIET TDG+KYCFSDGIGKIS+PFA+QVAKK GLS+TPSAFQIRYGGY
Sbjct: 523  FNVPSREVKVIPDIETNTDGVKYCFSDGIGKISVPFAKQVAKKLGLSNTPSAFQIRYGGY 582

Query: 1082 KGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGI 1261
            KGVI +DRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPC+LNREIV LLSTLGVDD I
Sbjct: 583  KGVITIDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCYLNREIVILLSTLGVDDEI 642

Query: 1262 FEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAY 1441
            FE+LQHDQ RLLD+MLT  EAAL VL RM+GS IKTA+KML HGY PDSEPYLL LLKAY
Sbjct: 643  FELLQHDQMRLLDNMLTSKEAALRVLGRMKGSAIKTALKMLMHGYAPDSEPYLLALLKAY 702

Query: 1442 REYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKID 1621
            REYQLSDIRSRCR+FVP+ RVLIGCLDELGTL+YGQV+++V+M +EEL+NP+Q FF+K+D
Sbjct: 703  REYQLSDIRSRCRIFVPRARVLIGCLDELGTLEYGQVFLKVSMTDEELQNPDQAFFTKVD 762

Query: 1622 QSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSG 1801
            +STA        TKNPCLHPGDIRV+EAVYD KLDN MG VDCLVFPQKGQRPHPNECSG
Sbjct: 763  RSTAVVVGKVVITKNPCLHPGDIRVVEAVYDPKLDN-MGWVDCLVFPQKGQRPHPNECSG 821

Query: 1802 GDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAI 1981
            GDLDGDLFSI WDERL+P KTVAPMDYISRR R+MDHK++LEEVHKFFIDYM+NDNLGAI
Sbjct: 822  GDLDGDLFSISWDERLIPSKTVAPMDYISRRPRLMDHKVSLEEVHKFFIDYMLNDNLGAI 881

Query: 1982 STAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGK 2161
            STAHLVHAD+EPDKALSTKCLKLANLHSMAVDYAKTGA AEM   LRP +FPDFMER  K
Sbjct: 882  STAHLVHADNEPDKALSTKCLKLANLHSMAVDYAKTGASAEMPSGLRPKRFPDFMERAEK 941

Query: 2162 STYKSNGVLGKLYRAATSHAKCSQNSMDITWEAIPYDSDLEVDGFEAFLEVAEEHYNQYA 2341
             +YKS+GVLGKLYRAA +    SQN   I  E IPYD DLEVDGFE FL  AEE Y++YA
Sbjct: 942  PSYKSSGVLGKLYRAAINPHNISQN---IICEEIPYDYDLEVDGFEEFLIAAEEFYSRYA 998

Query: 2342 DSLSALMKYYDITYEDEILTGYVRSRQMYLNDKRKYEDMKDRVLIAVRGLQKEAEGWFKS 2521
            + LSALMKYYDI YEDEILTGY+RSRQ YLNDKRKYEDMKDR+LIAV GL KE E WF+S
Sbjct: 999  ERLSALMKYYDIKYEDEILTGYMRSRQAYLNDKRKYEDMKDRILIAVNGLHKEVEEWFRS 1058

Query: 2522 SCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            SC+E+EF  +AAAWYHVTY  KYSGSG +FLSFPWA+CDVLL  K
Sbjct: 1059 SCNENEFKRMAAAWYHVTYQPKYSGSGIKFLSFPWAVCDVLLSIK 1103


>gb|ONK69464.1| uncharacterized protein A4U43_C05F23220 [Asparagus officinalis]
          Length = 999

 Score = 1436 bits (3717), Expect = 0.0
 Identities = 714/885 (80%), Positives = 787/885 (88%)
 Frame = +2

Query: 2    PDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIIN 181
            PDFSATSVIGRS +LCLELANGLS+SKI+K+LPFFGELGNL+L  GE   SSSKLVPI+N
Sbjct: 103  PDFSATSVIGRSYYLCLELANGLSSSKIIKSLPFFGELGNLMLMPGEVFCSSSKLVPILN 162

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            CP DCTV YEVLFQLNSLVH+QKISSA++NS+LF VLS LS DT  +ILM MHKLNSTC+
Sbjct: 163  CPGDCTVSYEVLFQLNSLVHLQKISSAHVNSNLFSVLSQLSSDTAIKILMMMHKLNSTCH 222

Query: 362  RPLYFIHDNLSRFGKQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKHY 541
            +P+YFI ++LSRFGKQQSLSS+ N  QE LMSCRRVL+TPSKVYFLGPELET NY+VKH+
Sbjct: 223  KPIYFIQNHLSRFGKQQSLSSDGNR-QEKLMSCRRVLITPSKVYFLGPELETSNYVVKHF 281

Query: 542  SAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKK 721
            SAYASDFLRVTF DEDRCKLP +AIS RI KDIFSK YRTGIYNR+L+VLRDGISIGSKK
Sbjct: 282  SAYASDFLRVTFVDEDRCKLPSQAISTRIGKDIFSKPYRTGIYNRILSVLRDGISIGSKK 341

Query: 722  FEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPT 901
            FEFLAFSASQLRD+S WMFASND VTA+ IREWMGQF+EIYSVSKCAARMGQLFSSSTPT
Sbjct: 342  FEFLAFSASQLRDSSIWMFASNDFVTASSIREWMGQFNEIYSVSKCAARMGQLFSSSTPT 401

Query: 902  FNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGY 1081
            FNVPS +V+VIPDIET TDG+KYCFSDGIGKIS+PFA+QVAKK GLS+TPSAFQIRYGGY
Sbjct: 402  FNVPSREVKVIPDIETNTDGVKYCFSDGIGKISVPFAKQVAKKLGLSNTPSAFQIRYGGY 461

Query: 1082 KGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGI 1261
            KGVI +DRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPC+LNREIV LLSTLGVDD I
Sbjct: 462  KGVITIDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCYLNREIVILLSTLGVDDEI 521

Query: 1262 FEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAY 1441
            FE+LQHDQ RLLD+MLT  EAAL VL RM+GS IKTA+KML HGY PDSEPYLL LLKAY
Sbjct: 522  FELLQHDQMRLLDNMLTSKEAALRVLGRMKGSAIKTALKMLMHGYAPDSEPYLLALLKAY 581

Query: 1442 REYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKID 1621
            REYQLSDIRSRCR+FVP+ RVLIGCLDELGTL+YGQV+++V+M +EEL+NP+Q FF+K+D
Sbjct: 582  REYQLSDIRSRCRIFVPRARVLIGCLDELGTLEYGQVFLKVSMTDEELQNPDQAFFTKVD 641

Query: 1622 QSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSG 1801
            +STA        TKNPCLHPGDIRV+EAVYD KLDN MG VDCLVFPQKGQRPHPNECSG
Sbjct: 642  RSTAVVVGKVVITKNPCLHPGDIRVVEAVYDPKLDN-MGWVDCLVFPQKGQRPHPNECSG 700

Query: 1802 GDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAI 1981
            GDLDGDLFSI WDERL+P KTVAPMDYISRR R+MDHK++LEEVHKFFIDYM+NDNLGAI
Sbjct: 701  GDLDGDLFSISWDERLIPSKTVAPMDYISRRPRLMDHKVSLEEVHKFFIDYMLNDNLGAI 760

Query: 1982 STAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGK 2161
            STAHLVHAD+EPDKALSTKCLKLANLHSMAVDYAKTGA AEM   LRP +FPDFMER  K
Sbjct: 761  STAHLVHADNEPDKALSTKCLKLANLHSMAVDYAKTGASAEMPSGLRPKRFPDFMERAEK 820

Query: 2162 STYKSNGVLGKLYRAATSHAKCSQNSMDITWEAIPYDSDLEVDGFEAFLEVAEEHYNQYA 2341
             +YKS+GVLGKLYRAA +    SQN   I  E IPYD DLEVDGFE FL  AEE Y++YA
Sbjct: 821  PSYKSSGVLGKLYRAAINPHNISQN---IICEEIPYDYDLEVDGFEEFLIAAEEFYSRYA 877

Query: 2342 DSLSALMKYYDITYEDEILTGYVRSRQMYLNDKRKYEDMKDRVLIAVRGLQKEAEGWFKS 2521
            + LSALMKYYDI YEDEILTGY+RSRQ YLNDKRKYEDMKDR+LIAV GL KE E WF+S
Sbjct: 878  ERLSALMKYYDIKYEDEILTGYMRSRQAYLNDKRKYEDMKDRILIAVNGLHKEVEEWFRS 937

Query: 2522 SCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            SC+E+EF  +AAAWYHVTY  KYSGSG +FLSFPWA+CDVLL  K
Sbjct: 938  SCNENEFKRMAAAWYHVTYQPKYSGSGIKFLSFPWAVCDVLLSIK 982


>ref|XP_019703492.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis
            guineensis]
          Length = 1117

 Score = 1187 bits (3070), Expect = 0.0
 Identities = 590/890 (66%), Positives = 706/890 (79%), Gaps = 5/890 (0%)
 Frame = +2

Query: 2    PDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIIN 181
            PDFS+ S IGRSC+LCLEL  GLS S+I K LPF GELG L L  G+  Y+ SKLVPII+
Sbjct: 216  PDFSSNSSIGRSCYLCLELVEGLSGSEIQKKLPFLGELGELALLMGQLYYAPSKLVPIIS 275

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            CP + +V YE+LFQLNSLVHMQKIS   +N+DLF +L GLS+DT  +IL KMHKL STCY
Sbjct: 276  CPPEHSVAYEILFQLNSLVHMQKISCGQVNNDLFDILRGLSLDTTMKILTKMHKLKSTCY 335

Query: 362  RPLYFIHDNLSRFGKQQSLSSN-KNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKH 538
             P+ FI + L+   K ++ SS  K+ P EN+MSC RVLVTPSKVYFLGPELET NY+++H
Sbjct: 336  EPVQFIKNQLASMRKNRNASSPIKSTPAENIMSCHRVLVTPSKVYFLGPELETSNYVIRH 395

Query: 539  YSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSK 718
            YS YASDF+RV+F +ED  KL  +AIS  I++ +FSK YRTGIYNR+L++L+DGI IGSK
Sbjct: 396  YSEYASDFIRVSFVEEDWGKLSFDAISTSIEQGVFSKPYRTGIYNRILSILKDGIVIGSK 455

Query: 719  KFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTP 898
            KFEFL FSASQLR NS WMFASND VTA  IREWMG F++I+SVSKCAARMGQLFSSS  
Sbjct: 456  KFEFLVFSASQLRSNSIWMFASNDKVTAESIREWMGHFNKIHSVSKCAARMGQLFSSSLQ 515

Query: 899  TFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGG 1078
            T +VP  DV+ I DI   TDG+ YCFSDGIGKISL FARQVA+KCGLSHTPSAFQIRYGG
Sbjct: 516  TIDVPFRDVKKISDITVTTDGIPYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGG 575

Query: 1079 YKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDG 1258
            YKGVIAVDRTSF KLSLRPSMLKF+S NTML VTK SE  PC+LNREI+ LLSTLGV+D 
Sbjct: 576  YKGVIAVDRTSFQKLSLRPSMLKFESENTMLCVTKWSEYLPCYLNREIICLLSTLGVEDE 635

Query: 1259 IFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKA 1438
            +FE++QHDQ  LLD+MLT  E  L +L +M     +T VKML  GY P+SEPYLLM+LKA
Sbjct: 636  VFELMQHDQMSLLDEMLTNREITLRMLDKMAFPDARTVVKMLMQGYEPNSEPYLLMMLKA 695

Query: 1439 YREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKI 1618
            YREYQLSDIRS+CR+FVPKGRVL+GCLDE G+LDYGQVYV++TM +EEL++ NQ FF K+
Sbjct: 696  YREYQLSDIRSKCRIFVPKGRVLLGCLDETGSLDYGQVYVKITMTKEELQDTNQTFFDKV 755

Query: 1619 DQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECS 1798
            DQ+ A        T+NPCLHPGD+RVL+AVY+ +LDN MGLVDC+VFPQ+G+RPHP+ECS
Sbjct: 756  DQTAAAVIQKVVVTRNPCLHPGDVRVLQAVYNPQLDN-MGLVDCIVFPQRGRRPHPSECS 814

Query: 1799 GGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGA 1978
            GGDLDGDL+ + WDE+L+PPKT  PMDY +RR R  DH +TLEE+ KFF+DYM+ND LG 
Sbjct: 815  GGDLDGDLYFVCWDEKLIPPKTDTPMDYYARRQRHTDHDVTLEEIQKFFVDYMINDTLGV 874

Query: 1979 ISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLG 2158
            ISTAHLV+AD EP KA S KCL+LANLHSMAVD+AKTG+ AEM + LRP +FPDFMER  
Sbjct: 875  ISTAHLVYADREPAKARSPKCLQLANLHSMAVDFAKTGSSAEMPRILRPKEFPDFMERWD 934

Query: 2159 KSTYKSNGVLGKLYRAATSHAKCSQNSMDITWEAIP---YDSDLEVDGFEAFLEVAEEHY 2329
            +  Y S G+LGKLYR+A+SH +   N+  +  E +P   YD DL+V GFEAFLEVAE++ 
Sbjct: 935  RPMYVSTGILGKLYRSASSHIE-RPNTDLMDAEMLPQSAYDYDLQVSGFEAFLEVAEDYR 993

Query: 2330 NQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAE 2506
            N Y++ LS+LM YY   +EDEILTG +RSR MYL  DK+KY +MKDR+L+ V+ L KE +
Sbjct: 994  NMYSERLSSLMNYYGAEHEDEILTGNLRSRSMYLQRDKKKYGEMKDRILLGVKSLHKEVQ 1053

Query: 2507 GWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            GWFK SC+ESE   +A+AWYHVTYH  Y  S  RFLSFPW + D LL  K
Sbjct: 1054 GWFKRSCAESESLRMASAWYHVTYHPSYY-SENRFLSFPWILSDALLSIK 1102


>ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Phoenix
            dactylifera]
          Length = 1117

 Score = 1185 bits (3065), Expect = 0.0
 Identities = 591/889 (66%), Positives = 703/889 (79%), Gaps = 5/889 (0%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINC 184
            DFS+ S IGRSC+LCLEL  GL  S+I K LPF GELG L L  GE  Y+ SKLVPII+C
Sbjct: 217  DFSSNSSIGRSCYLCLELVEGLPGSEIQKKLPFAGELGELALSMGELFYAPSKLVPIISC 276

Query: 185  PVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYR 364
            P + +V YE+LFQLNSLVH+QKIS   +N+DLF +L GLS+DT  +IL +MHKLNSTCY 
Sbjct: 277  PPEHSVAYEILFQLNSLVHVQKISCGQVNNDLFDILRGLSLDTTMKILTRMHKLNSTCYE 336

Query: 365  PLYFIHDNLSRFGKQQSLSSN-KNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKHY 541
            P+ FI + L+   K ++ SS  ++   EN+M C RVLVTPSKVYF GPELET NY+VKHY
Sbjct: 337  PMQFIKNQLANMRKNRNASSPIQSAHAENIMGCHRVLVTPSKVYFFGPELETSNYVVKHY 396

Query: 542  SAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKK 721
            S YASDF+RV+F +ED  KL  +AIS  I++ +FSK YRTGIYNR+L++LRDGI IGSKK
Sbjct: 397  SEYASDFIRVSFVEEDWGKLSSDAISPSIEQGLFSKPYRTGIYNRILSILRDGIVIGSKK 456

Query: 722  FEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPT 901
            FEFLAFSASQLR NS WMFASND VTA  IREWMG F++I+S+SKCAARMGQLFSSS  T
Sbjct: 457  FEFLAFSASQLRSNSVWMFASNDKVTAEGIREWMGHFNKIHSISKCAARMGQLFSSSLQT 516

Query: 902  FNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGY 1081
             +VP  DVR I DI   TDG+ YCFSDGIGKISL FARQVA+KCGLSHTPSAFQIRYGGY
Sbjct: 517  IDVPFRDVRTISDITVTTDGIPYCFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGY 576

Query: 1082 KGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGI 1261
            KGVIAVDRTSF KLSLRPSMLKF+S NTML VTK SE  PC+LNREI+ LLSTLG++D +
Sbjct: 577  KGVIAVDRTSFQKLSLRPSMLKFESENTMLCVTKWSEYLPCYLNREIICLLSTLGIEDEV 636

Query: 1262 FEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAY 1441
            FE +QHDQ  LLD+MLT  E AL +L +M     +T VKML  GY P+SEPYLLM+LKAY
Sbjct: 637  FESMQHDQMSLLDEMLTNREIALRMLDKMAFPDTRTTVKMLMQGYEPNSEPYLLMMLKAY 696

Query: 1442 REYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKID 1621
            REYQLSDIRS+CR+FVPKGRVL+GCLDE G+LDYGQ+YV+VTM +EEL++  +  F K+D
Sbjct: 697  REYQLSDIRSKCRIFVPKGRVLLGCLDETGSLDYGQIYVKVTMTKEELQHTYETCFDKVD 756

Query: 1622 QSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSG 1801
            Q+ A        T+NPCLHPGD+R+L+AVY+ +LDN MGLVDC+VFPQKG+RPHPNECSG
Sbjct: 757  QTAAVVVQKVVVTRNPCLHPGDVRILQAVYNPQLDN-MGLVDCIVFPQKGRRPHPNECSG 815

Query: 1802 GDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAI 1981
            GDLDGDL+ + WDE+L+PPK   PMDY +RR R  DH +TLEE+ KFF+DYM+ND LG I
Sbjct: 816  GDLDGDLYFVCWDEKLIPPKMDTPMDYNARRQRHTDHDVTLEEIQKFFVDYMINDTLGII 875

Query: 1982 STAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGK 2161
            STAHLV+ADSEP KA S KCL+LANLHSMAVD+AKTG+ AEM + L+P  FPDFMER  +
Sbjct: 876  STAHLVYADSEPGKAQSPKCLELANLHSMAVDFAKTGSSAEMPRILKPKMFPDFMERWDR 935

Query: 2162 STYKSNGVLGKLYRAATSHAKCSQNSMDITWEAIP---YDSDLEVDGFEAFLEVAEEHYN 2332
            + Y S GVLGKLYRAA+ H +   N+  +  E +P   YD DLE+ GFEAFLEVAE++YN
Sbjct: 936  TMYVSTGVLGKLYRAASRHIE-RPNTDPMDAEMLPQSAYDHDLEIKGFEAFLEVAEDYYN 994

Query: 2333 QYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEG 2509
            QY++ LS+LMKYY   +EDEILTG +RSR MYL  DK+KY +MKDR+LI V+ L KE +G
Sbjct: 995  QYSERLSSLMKYYGAEHEDEILTGNLRSRSMYLQRDKKKYGEMKDRILIGVKSLHKEVQG 1054

Query: 2510 WFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            WFKSSC ESE   +A+AWYHVTYH  Y  S  RFLSFPW + D LL  K
Sbjct: 1055 WFKSSCVESESLRMASAWYHVTYHPSYY-SENRFLSFPWILSDALLSIK 1102


>ref|XP_020110295.1| probable RNA-dependent RNA polymerase 2 [Ananas comosus]
          Length = 1125

 Score = 1165 bits (3014), Expect = 0.0
 Identities = 575/892 (64%), Positives = 704/892 (78%), Gaps = 7/892 (0%)
 Frame = +2

Query: 2    PDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIIN 181
            PDFS  S IG+S   CL+L   L  S +LK+LPF GELG +IL+ G    SS+KLVP+++
Sbjct: 217  PDFSVNSSIGKSTCFCLKLKERLLGSDVLKSLPFSGELGEVILRTGNVSTSSTKLVPLVD 276

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            CP D +V YE+LFQLNSLVH QK+ +  +NSDLF +L  L  D   RIL+KMHKL S CY
Sbjct: 277  CPSDNSVAYEILFQLNSLVHNQKLPAKKVNSDLFNLLGELPFDISMRILLKMHKLKSICY 336

Query: 362  RPLYFIHDNLSRFG---KQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
             P+ F+   ++ F    KQ +LSS+K+   E+LM C RVL+TPSKVY LGPE ET NY+V
Sbjct: 337  EPMQFVRQQVANFRRNRKQNALSSSKSTHSESLMKCYRVLITPSKVYCLGPEAETSNYVV 396

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            KHYSAYASDF+RV+F DED  KL  + IS RI++ +FSK ++TGI++R+L++LRDG SIG
Sbjct: 397  KHYSAYASDFVRVSFVDEDWSKLSPDTISARIERGLFSKPFKTGIHDRILSILRDGFSIG 456

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
             KKFEFLAFSASQLR NS WMFASND VTA  IREWMGQF++I+SVSKCAARMGQLFSSS
Sbjct: 457  LKKFEFLAFSASQLRSNSVWMFASNDDVTAEGIREWMGQFNQIHSVSKCAARMGQLFSSS 516

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
              T NVPS +V+ IPDI+  TDG KY FSDGIGKISL FARQVA+KCGLSHTPSAFQIRY
Sbjct: 517  LQTLNVPSWEVKTIPDIDVTTDGNKYTFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRY 576

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIAVDRTSF KLSLRPSM KF+SN+TMLN+TK S  QPCFLNREI+ LLSTLG++
Sbjct: 577  GGYKGVIAVDRTSFNKLSLRPSMKKFESNSTMLNITKWSNYQPCFLNREIICLLSTLGIE 636

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLL 1432
            D +FE +QH+    LD MLT SE AL VL +M G+  +TAVKMLTHGY P SEPYL M+L
Sbjct: 637  DEVFESMQHEHMHFLDGMLTNSEVALIVLGQMAGAETRTAVKMLTHGYEPTSEPYLSMML 696

Query: 1433 KAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFS 1612
            +A+REYQLSD+RS+CR+FVPKGRVL+GCLDE+G L+YGQVYVR+T+ +EEL++ +Q FF 
Sbjct: 697  QAHREYQLSDLRSKCRIFVPKGRVLVGCLDEIGLLEYGQVYVRITLTKEELKDADQTFFH 756

Query: 1613 KIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNE 1792
            K+D++TA        TKNPCLHPGDIRVLEAVYD +LD+ MGLVDC+VFPQKG+RPHPNE
Sbjct: 757  KVDETTAVIVGKVVVTKNPCLHPGDIRVLEAVYDVQLDD-MGLVDCVVFPQKGKRPHPNE 815

Query: 1793 CSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNL 1972
            CSGGDLDGDL+ + WD RLVP  T  PMDY +RR R+MDH +TLEE+ KFF+DYM++D+L
Sbjct: 816  CSGGDLDGDLYFVCWDRRLVPDNTDTPMDYTARRPRIMDHDVTLEEIQKFFVDYMISDSL 875

Query: 1973 GAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMER 2152
            G IST HLV+ADSEP KA S KCL+LA+LHSMAVD+AKTGAPA+M + L+P ++PDFMER
Sbjct: 876  GIISTTHLVYADSEPMKARSPKCLELASLHSMAVDFAKTGAPADMPRVLKPKEYPDFMER 935

Query: 2153 LGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWEAIP---YDSDLEVDGFEAFLEVAEE 2323
              +S YKS GVLGKLYRA ++H + + +       +IP   YD DLEV+GFEAFLE A+E
Sbjct: 936  WDRSMYKSTGVLGKLYRAVSTHIEETLSFDTDFSNSIPEAAYDRDLEVEGFEAFLEAAQE 995

Query: 2324 HYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKE 2500
             Y+QY++ LS+LM YY   YEDEILTG +R+R +YL  D+++Y +MKDR+L+ V+GL KE
Sbjct: 996  FYDQYSEKLSSLMNYYGAEYEDEILTGNLRNRSLYLVKDRKRYGEMKDRILVVVKGLHKE 1055

Query: 2501 AEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
              GWF SSC++++   +A+AWYHVTYH  YS    RFLSFPW I D LL  K
Sbjct: 1056 VGGWFNSSCADNDSLKMASAWYHVTYHPNYSPK-NRFLSFPWTISDALLSIK 1106


>gb|OAY66642.1| putative RNA-dependent RNA polymerase 2 [Ananas comosus]
          Length = 947

 Score = 1156 bits (2990), Expect = 0.0
 Identities = 573/892 (64%), Positives = 702/892 (78%), Gaps = 7/892 (0%)
 Frame = +2

Query: 2    PDFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIIN 181
            PDFS  S IG+S   CL+L   L  S +LK+LPF GELG +IL+ G    SS+KLVP+++
Sbjct: 43   PDFSVNSSIGKSTCFCLKLKERLLGSDVLKSLPFSGELGEVILRTGNVSTSSTKLVPLVD 102

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            CP D +V YE+LFQLNSLVH QK+ +  +NSDLF +L  L  D   RIL+KMHKL S CY
Sbjct: 103  CPSDNSVAYEILFQLNSLVHNQKLPAKKVNSDLFNLLGELPFDISMRILLKMHKLKSICY 162

Query: 362  RPLYFIHDNLSRFG---KQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
             P+ F+   ++ F    KQ +LSS+K+   E+LM C RVL+TPSKVY LGPE ET NY+V
Sbjct: 163  EPMQFVRQQVANFRRNRKQNALSSSKSTHSESLMKCYRVLITPSKVYCLGPEAETSNYVV 222

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            KHYSAYASDF+RV+F DED  KL  + IS RI++ +FSK ++TGI++R+L++LRDG SIG
Sbjct: 223  KHYSAYASDFVRVSFVDEDWSKLSPDTISARIERGLFSKPFKTGIHDRILSILRDGFSIG 282

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
             KKFEFLAFSASQLR NS WMFASND VTA  IREWMGQF++I+SVSKCAARMGQLFSSS
Sbjct: 283  LKKFEFLAFSASQLRSNSVWMFASNDDVTAEGIREWMGQFNQIHSVSKCAARMGQLFSSS 342

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
              T NVPS +V+ IPDI+  TDG KY FSDGIGKISL FARQVA+KCGLSHTPSAFQIRY
Sbjct: 343  LQTLNVPSWEVKTIPDIDVTTDGNKYTFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRY 402

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIAVDRTSF KLSLRPSM KF+SN+TMLN+TK S  QPCFLNREI+ LLSTLG++
Sbjct: 403  GGYKGVIAVDRTSFNKLSLRPSMKKFESNSTMLNITKWSNYQPCFLNREIICLLSTLGIE 462

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLL 1432
            D +FE +QH+    LD MLT SE AL VL +M G+  +TAVKMLTHGY P SEPYL M+L
Sbjct: 463  DEVFESMQHEHMHFLDGMLTNSEVALIVLGQMAGAETRTAVKMLTHGYEPTSEPYLSMML 522

Query: 1433 KAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFS 1612
            +A+REYQLSD+RS+CR+FVPKGRVL+GCLDE+G L+YGQVYVR+T+ +EEL++ +Q FF 
Sbjct: 523  QAHREYQLSDLRSKCRIFVPKGRVLVGCLDEIGLLEYGQVYVRITLTKEELKDADQTFFH 582

Query: 1613 KIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNE 1792
            K+D++TA        TKNPCLHPGDIRVLEAVYD +LD+ MGLVDC+VFPQKG+RPHPNE
Sbjct: 583  KVDETTAVIVGKVVVTKNPCLHPGDIRVLEAVYDVQLDD-MGLVDCVVFPQKGKRPHPNE 641

Query: 1793 CSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNL 1972
            CSGGDLDGDL+ + WD RLVP  T  PMDY +RR R+MDH    +E+ KFF+DYM++D+L
Sbjct: 642  CSGGDLDGDLYFVCWDRRLVPDNTDTPMDYTARRPRIMDH----DEIQKFFVDYMISDSL 697

Query: 1973 GAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMER 2152
            G IST HLV+ADSEP KA S KCL+LA+LHSMAVD+AKTGAPA+M + L+P ++PDFMER
Sbjct: 698  GIISTTHLVYADSEPMKARSPKCLELASLHSMAVDFAKTGAPADMPRVLKPKEYPDFMER 757

Query: 2153 LGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWEAIP---YDSDLEVDGFEAFLEVAEE 2323
              +S YKS GVLGKLYRA ++H + + +       +IP   YD DLEV+GFEAFLE A+E
Sbjct: 758  WDRSMYKSTGVLGKLYRAVSTHIEETLSFDTDFSNSIPEAAYDRDLEVEGFEAFLEAAQE 817

Query: 2324 HYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKE 2500
             Y+QY++ LS+LM YY   YEDEILTG +R+R +YL  D+++Y +MKDR+L+ V+GL KE
Sbjct: 818  FYDQYSEKLSSLMNYYGAEYEDEILTGNLRNRSLYLVKDRKRYGEMKDRILVVVKGLHKE 877

Query: 2501 AEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
              GWFKSSC++++   +A+AWYHVTYH  YS    RFLSFPW I D LL  K
Sbjct: 878  VGGWFKSSCADNDSLKMASAWYHVTYHPNYSPK-NRFLSFPWTISDALLSIK 928


>ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Musa acuminata
            subsp. malaccensis]
          Length = 1106

 Score = 1121 bits (2899), Expect = 0.0
 Identities = 558/886 (62%), Positives = 684/886 (77%), Gaps = 2/886 (0%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINC 184
            DFS  + IG+SC  CL+LA GLS  +IL+ LPF   L +L L +GE    S  LVPI+NC
Sbjct: 217  DFSPDNTIGKSCCYCLQLAAGLSCPEILRDLPFSTVLEDLNLFKGELWSPSWMLVPIVNC 276

Query: 185  PVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYR 364
            P D +V +E+L+Q+NSLVHMQKI+   + +DLF +  GL +D+  +ILMKMHKL STCY 
Sbjct: 277  PSDYSVAFEILYQINSLVHMQKITFRQVTTDLFDIFKGLPLDSAIKILMKMHKLTSTCYN 336

Query: 365  PLYFIHDNLSRFGKQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKHYS 544
            P+ FI + L++     + SSNK+   +NLMSC RVLVTP+KVY LGPELET NY+VKH+S
Sbjct: 337  PVQFIKNQLAKIKNFHAPSSNKSTIAQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFS 396

Query: 545  AYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKKF 724
              ASDFLRV+F DED  KLP +AIS+ ID++  SK +RTGIY R+L+VL+DG+ IGSKKF
Sbjct: 397  TNASDFLRVSFVDEDWSKLPSDAISVTIDRNFLSKPHRTGIYTRILSVLKDGLHIGSKKF 456

Query: 725  EFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPTF 904
            EFLAFSASQLR NS WMFASN+++TA  IR+WMG F  I+SVSKCAARMGQLFSSS  T 
Sbjct: 457  EFLAFSASQLRANSVWMFASNENLTAESIRKWMGHFSGIHSVSKCAARMGQLFSSSVQTL 516

Query: 905  NVPSHDVRVIPDIETVT-DGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGY 1081
            NVP  DV++IPDIE  T DG KYCFSDGIGKISL FA+Q+AKKCGL +TPSAFQIRYGGY
Sbjct: 517  NVPRQDVKIIPDIEVTTEDGKKYCFSDGIGKISLSFAKQIAKKCGLRNTPSAFQIRYGGY 576

Query: 1082 KGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGI 1261
            KGVIA+DRTSF KLSLR SMLKF+S NTML+VTK SE  PCFLNREI+ LLSTLG+ D I
Sbjct: 577  KGVIAIDRTSFWKLSLRKSMLKFESTNTMLSVTKWSEYLPCFLNREIICLLSTLGIKDEI 636

Query: 1262 FEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAY 1441
            FE +QHDQ + L  MLT  E AL VL RM GS ++TA+KML  GY P+SEPYL M+LKA 
Sbjct: 637  FESMQHDQMQQLGKMLTDKEVALRVLDRMTGSEVRTAIKMLMQGYDPNSEPYLSMMLKAS 696

Query: 1442 REYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKID 1621
            R+YQLSD RS+CR+FVPKGRVLIGCLDE   LDYGQ Y++VTM +EEL+N +Q F    D
Sbjct: 697  RDYQLSDTRSKCRIFVPKGRVLIGCLDETCNLDYGQAYIKVTMTKEELQNEDQTFLRNTD 756

Query: 1622 QSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSG 1801
            Q++A        T+NPCLHPGDIRVL+AVYD  LD+ MGLVDC++FPQKG RPHPNECSG
Sbjct: 757  QTSAVVVGKVVVTRNPCLHPGDIRVLQAVYDVGLDD-MGLVDCIIFPQKGTRPHPNECSG 815

Query: 1802 GDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAI 1981
            GDLDGDL+ + WD+ L+PP+T  PMDY  RR R+MDH +TLEE+ KFF+DYM+ND LG I
Sbjct: 816  GDLDGDLYFVCWDKNLIPPETDTPMDYTPRRPRLMDHDVTLEEIQKFFVDYMINDTLGVI 875

Query: 1982 STAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGK 2161
            ST HL++ADSEP KA S KCL+LANLHS AVD+AKTGAPAEM + LRP +FPDFMER  +
Sbjct: 876  STTHLIYADSEPTKARSPKCLELANLHSEAVDFAKTGAPAEMPRVLRPKEFPDFMERWDR 935

Query: 2162 STYKSNGVLGKLYRAATSHAKCSQNSMDITWEAIPYDSDLEVDGFEAFLEVAEEHYNQYA 2341
            ST+ S GV+GKLYRAA+ H +   +   I+ +   YD DL+V+GFE FL  A+E+Y++Y+
Sbjct: 936  STFISPGVIGKLYRAASIHFEDVNSDATIS-KVSAYDYDLQVEGFEEFLSPAKEYYDRYS 994

Query: 2342 DSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAEGWFK 2518
            + LS LM YY   +EDEILTG +R++ +YL  DK++Y +MKDR+L+ VR LQ+E EGWF+
Sbjct: 995  EKLSLLMNYYGAEHEDEILTGNLRNKSLYLQKDKKRYGEMKDRMLVGVRSLQQEVEGWFR 1054

Query: 2519 SSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
             SC+E +   +A+AWYHVTYH  Y      FLSFPW + DVLL  K
Sbjct: 1055 CSCAERDSSRMASAWYHVTYHRDYHPE-TTFLSFPWILSDVLLNIK 1099


>gb|OVA03721.1| RNA recognition motif domain [Macleaya cordata]
          Length = 1117

 Score = 1080 bits (2793), Expect = 0.0
 Identities = 547/894 (61%), Positives = 666/894 (74%), Gaps = 10/894 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFF-GELGNLILKQGEQLYSSSKLVPIIN 181
            DFS    IG+S  LC +L  G   S IL   P + GELG+  L+  E+    S+LVP++ 
Sbjct: 218  DFSVLKSIGQSSSLCWQLQKGTLASDILNNFPRYEGELGDFTLEHDERSCFGSELVPLVR 277

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            CP+D  + YE+LF LNSLVH QKIS   +N+D+ ++LS LS+DT T+IL K+ K+ STCY
Sbjct: 278  CPLDSKLSYEILFLLNSLVHAQKISLTAVNTDVIEILSSLSMDTATKILQKLRKVKSTCY 337

Query: 362  RPLYFIHDNLSRFG---KQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
              +  +   L       K Q  SS     + NLMSC RVLVTPSKVYFLGPE+ET NY+V
Sbjct: 338  EVMSLVQSQLHSLRGDQKHQPSSSQSRLTERNLMSCHRVLVTPSKVYFLGPEVETSNYVV 397

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            KH++AYASDF+RV F +ED  KLP +AI+  I++ IF K YRT IY+R+L+VLRDGI IG
Sbjct: 398  KHFAAYASDFMRVNFVEEDWSKLPSDAITTSIEQGIFCKPYRTSIYHRILSVLRDGIVIG 457

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
            +K+FEFLAFSASQLR NS WMFASND V + D+REWMG F++I SVSKCAARMGQLFSSS
Sbjct: 458  AKRFEFLAFSASQLRSNSVWMFASNDKVRSEDVREWMGCFNKIRSVSKCAARMGQLFSSS 517

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
              T  VP+ DV +IPD+E  TDG+KYCFSDGIGKISL FA+QVA+KCGL+H PSAFQIRY
Sbjct: 518  LQTLTVPAQDVEIIPDVEVNTDGIKYCFSDGIGKISLSFAKQVAQKCGLNHIPSAFQIRY 577

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIA+DR SF KLSLRPSMLKF S N MLN+T  SES PC+LNREIV+LLSTLG+D
Sbjct: 578  GGYKGVIALDRNSFRKLSLRPSMLKFDSKNRMLNITSWSESMPCYLNREIVSLLSTLGID 637

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLML 1429
            D  F  +Q +Q   LD MLT  EAAL VL  M G  IK+  VKML  GY P SEPYLLM+
Sbjct: 638  DEKFMAMQQEQIHRLDKMLTSREAALNVLEGMNGGDIKSILVKMLLQGYEPSSEPYLLMM 697

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELR-NPNQEF 1606
            L+A+REYQLSDIRS+CR+FV K RVL+GCLDE  TL+YGQV++RVTM   EL+    Q F
Sbjct: 698  LRAHREYQLSDIRSKCRIFVSKARVLMGCLDETATLNYGQVFIRVTMTRAELQCGDAQTF 757

Query: 1607 FSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHP 1786
            F K+D  T+        TKNPCLHPGDIRVLEAVY+  L+   GLVDCLVFPQKG+RPHP
Sbjct: 758  FQKVDDKTSIVVGKVVVTKNPCLHPGDIRVLEAVYEPALEE-KGLVDCLVFPQKGERPHP 816

Query: 1787 NECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMND 1966
            NECSGGDLDGDLF + WD+ L+P ++  PMDYI+RR R+MDH +TLEE+ KFF+DYM+ND
Sbjct: 817  NECSGGDLDGDLFFVCWDDNLIPLQSDTPMDYIARRPRLMDHDVTLEEIQKFFVDYMIND 876

Query: 1967 NLGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFM 2146
             LG ISTAHLVHAD EP+KA S+KC +LA LHSMAVD+AKTGAPAEM + LRP ++PDFM
Sbjct: 877  TLGMISTAHLVHADCEPEKARSSKCRQLATLHSMAVDFAKTGAPAEMPRVLRPKEYPDFM 936

Query: 2147 ERLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWE---AIPYDSDLEVDGFEAFLEVA 2317
            ER  ++ Y S+GVLGKLYR AT   K + +   I  E    + YD DLEV+GFEAFLE A
Sbjct: 937  EREDRAMYISSGVLGKLYR-ATIEWKENHDPNIIQSEIVAQVAYDDDLEVNGFEAFLETA 995

Query: 2318 EEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQ 2494
            E H N Y +  SALM YY    E+E+LTG +R   +YL  DKR+Y +MKDR+L +++ LQ
Sbjct: 996  ENHKNMYVEKFSALMNYYGAECEEEMLTGNLRELSVYLQRDKRRYTEMKDRILDSIKSLQ 1055

Query: 2495 KEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            KEA+GWF SSC + E   +A+AWYHVTYH K+  +G+ +LSFPW + D+LL  K
Sbjct: 1056 KEAKGWFHSSCKDHENTKMASAWYHVTYHPKFCQNGKNYLSFPWIVGDILLNIK 1109


>ref|XP_020701436.1| probable RNA-dependent RNA polymerase 2 [Dendrobium catenatum]
 gb|PKU68673.1| RNA-dependent RNA polymerase 2 [Dendrobium catenatum]
          Length = 1117

 Score = 1067 bits (2759), Expect = 0.0
 Identities = 543/891 (60%), Positives = 665/891 (74%), Gaps = 7/891 (0%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINC 184
            DFS T+ +G S + CLEL NGL  S I    P++ E+G +IL + E L S SKLVPII C
Sbjct: 218  DFSLTNALGSSSYFCLELENGLYISDIFMNFPYYSEMGEVILSKKEALCSLSKLVPIIGC 277

Query: 185  PVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYR 364
                 + Y++LFQLNSLVH QKIS  + + D+  +L     DT+ +I MKMHK  STC  
Sbjct: 278  SDKAVLAYDMLFQLNSLVHTQKISLLH-SPDIIDILRKEDSDTILKIFMKMHKFKSTCSN 336

Query: 365  PLYFIHDNLSRFGK-QQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKHY 541
            P+ F+   L    + Q+++ +N     +NLM C R L+TPSKVYFLGPELE  NY++KH+
Sbjct: 337  PVEFLERELLNMRRNQKAIPANNQSLSQNLMRCYRALITPSKVYFLGPELENSNYVIKHF 396

Query: 542  SAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKK 721
            SAY+SDFLRV+F DED  KL  +A+S RI++   SK Y+TGIY+R+L++L+DGI IGSKK
Sbjct: 397  SAYSSDFLRVSFVDEDWGKLSSDALSARIEQGFTSKAYKTGIYDRILSILQDGIIIGSKK 456

Query: 722  FEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPT 901
            FEFLAFSASQLR NS WMF+SN  VTA  IR WMG F++I SVSKCAARMGQ FSSS P 
Sbjct: 457  FEFLAFSASQLRANSCWMFSSNCDVTAESIRNWMGDFNKIRSVSKCAARMGQQFSSSFPA 516

Query: 902  FNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYGGY 1081
              + S DV +I DI    DG+KYCFSDGIGK+SL  A Q+A++ G++ TPSAFQIRYGGY
Sbjct: 517  MCIESKDVDIIDDIYCDADGIKYCFSDGIGKVSLSLAEQIAQRFGMNRTPSAFQIRYGGY 576

Query: 1082 KGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDDGI 1261
            KGVIAVD+TSF KLSLRPSMLKF S NTM+N+T  S+  P FLNREI++LLSTLGV+DG+
Sbjct: 577  KGVIAVDQTSFRKLSLRPSMLKFDSKNTMVNITSYSKYLPSFLNREIISLLSTLGVEDGV 636

Query: 1262 FEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLMLLKAY 1441
            FE +QH Q  LLD+ML   +AAL V+S++ G   + A  +L  GY P S PYL MLL+AY
Sbjct: 637  FEAMQHYQMSLLDNMLMDKDAALEVISKISGPEKEKAENLLLRGYEPSSLPYLSMLLRAY 696

Query: 1442 REYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFSKID 1621
            R YQLSDIRSRCR+FVPKGR+LIGCLDE GTLDYGQV++RVTM +EE +N +Q FF   D
Sbjct: 697  RAYQLSDIRSRCRIFVPKGRILIGCLDESGTLDYGQVFLRVTMTKEEQKNKSQTFFKDAD 756

Query: 1622 QSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNECSG 1801
             +T         TKNPCLHPGDIRVLEA+ D +LD  MGLVDCLVFPQKG+RPHPNECSG
Sbjct: 757  HATVVITGRVVVTKNPCLHPGDIRVLEAICDPQLDE-MGLVDCLVFPQKGERPHPNECSG 815

Query: 1802 GDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNLGAI 1981
            GDLDGDL+ + WDERLVP +T  PMDYI  R R+ DH++TLEE+HKFF+DYM+NDNLGAI
Sbjct: 816  GDLDGDLYFVSWDERLVPLQTDPPMDYIGLRPRLQDHEVTLEEIHKFFVDYMINDNLGAI 875

Query: 1982 STAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMERLGK 2161
            STAHLV+ADSEP KA S KCL+LANLHSMAVD+AKTG PAEM + LRP +FPDFMER  +
Sbjct: 876  STAHLVYADSEPLKARSPKCLQLANLHSMAVDFAKTGVPAEMPRILRPKEFPDFMERWDR 935

Query: 2162 STYKSNGVLGKLYRAATSHAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLEVAEEHY 2329
            S Y S GVLGKLYR+AT+H   ++ + +  W     A  YD+DLEV+GFE FL+ AE++Y
Sbjct: 936  SMYTSKGVLGKLYRSATAHQ--NKETSNTFWSEELAAASYDNDLEVEGFEMFLKPAEDYY 993

Query: 2330 NQYADSLSALMKYYDITYEDEILTGYVRS--RQMYLNDKRKYEDMKDRVLIAVRGLQKEA 2503
            NQYA+ LS LM Y+   +EDEILTGYVRS      L DK+K+ D+ DR++IAV+ L +E 
Sbjct: 994  NQYAEKLSFLMNYFGAVHEDEILTGYVRSGGPSYVLRDKKKFGDIADRIMIAVKSLHQEV 1053

Query: 2504 EGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            + WF SSC ESE   +A+AWYH+T H KY  S  +FLSFPW I DVLL  K
Sbjct: 1054 KSWF-SSCRESESLKMASAWYHITCHPKY-WSSNKFLSFPWIIWDVLLNIK 1102


>ref|XP_021674490.1| RNA-dependent RNA polymerase 2 [Hevea brasiliensis]
          Length = 1120

 Score = 1065 bits (2753), Expect = 0.0
 Identities = 534/894 (59%), Positives = 664/894 (74%), Gaps = 10/894 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIIN 181
            DFS+   IG++   C E+  GL TS I  + P++ E   +L+L+ GE+ +S+S++VP+  
Sbjct: 221  DFSSVKSIGQATSFCWEIEEGLETSDIFTSFPYYTEDRKDLVLEDGEEFHSTSEIVPLAK 280

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            C  D  + YE++FQLNSLVH  KIS A++++DL  VLS L++DT   IL K+HKL+ TCY
Sbjct: 281  CGPDSKLAYEIIFQLNSLVHTHKISLASVDTDLINVLSSLTIDTAMMILQKLHKLSFTCY 340

Query: 362  RPLYFIHDNLSRFG---KQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
             PL FI   L   G   K+ S+SS KN    N+ +C R L+TPSK+Y LGPELET NY+V
Sbjct: 341  DPLSFIKKQLHVPGRNLKKPSMSSRKNYTDHNITNCHRALITPSKIYCLGPELETSNYVV 400

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            K++++YASDF+R+TF +ED  KLP  AIS  I + IF+K +RT IY+R+L++LRDGI IG
Sbjct: 401  KNFASYASDFMRITFVEEDWSKLPANAISTSIQQGIFAKPFRTEIYHRILSILRDGIVIG 460

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
            +K+FEFLAFSASQLR NS WMFASND V A  IREWMG F++I S+SKCAARMGQLFS+S
Sbjct: 461  AKRFEFLAFSASQLRSNSVWMFASNDDVKAEGIREWMGCFNKIRSISKCAARMGQLFSAS 520

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
              TF VP+ DV +IPDIE  +DG+ YCFSDGIGKISL FARQVA+KCGL+ TPSAFQIRY
Sbjct: 521  RQTFVVPAQDVEIIPDIEVTSDGIGYCFSDGIGKISLSFARQVAQKCGLNQTPSAFQIRY 580

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGV+AVDR SF KLSLR SM KF+S+N MLNVTK SES PC+LNREIV+LLSTLGV 
Sbjct: 581  GGYKGVVAVDRNSFRKLSLRGSMCKFESDNRMLNVTKWSESMPCYLNREIVSLLSTLGVK 640

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLML 1429
            D IFE LQ  Q RLL  ML+  EAAL VL  +  +  K   VKML  GY P+ EPYL M+
Sbjct: 641  DEIFEGLQQQQLRLLSRMLSNREAALDVLENLTWANSKNFLVKMLLQGYEPNVEPYLSMM 700

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFF 1609
            L+AY E  L ++RSRCR+FVPKGR+LIGCLDE   L YGQV+VR+TM + EL++ +Q FF
Sbjct: 701  LQAYHENLLVELRSRCRIFVPKGRILIGCLDETRLLHYGQVFVRITMTKAELQSIDQSFF 760

Query: 1610 SKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPN 1789
             ++D+ T+        TKNPCLHPGD+RVL+AVY+ +L+   GLVDC++FPQKG+RPHPN
Sbjct: 761  RRVDEKTSIVTGKVVVTKNPCLHPGDVRVLDAVYEVELEE-KGLVDCILFPQKGERPHPN 819

Query: 1790 ECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDN 1969
            ECSGGDLDGDLF I WD+ L+P +T  PMDY+ RR R+MDH +TLEE+ KFF+DYM+ND 
Sbjct: 820  ECSGGDLDGDLFFISWDKGLIPSQTECPMDYLGRRPRIMDHNVTLEEIQKFFVDYMINDT 879

Query: 1970 LGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFME 2149
            LGAISTAHLVHADSEP+KA S KCL+LA LHSMAVD+AK+GAPAEM + L+P +FPDFME
Sbjct: 880  LGAISTAHLVHADSEPEKARSKKCLQLAALHSMAVDFAKSGAPAEMPRALKPKEFPDFME 939

Query: 2150 RLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLEVA 2317
            R  K+TY SNGVLGKLYR     A  S+      W        YD DLEV G E F+E+A
Sbjct: 940  RTDKNTYVSNGVLGKLYRGTIDSA--SRERSKFVWSEKVAEATYDRDLEVKGLEEFIEMA 997

Query: 2318 EEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQ 2494
                + Y + LS LM YY+  YEDEILTG +R++ MYL  D R+Y DMKDR+L+++R LQ
Sbjct: 998  LSQKDMYIEKLSGLMNYYEAKYEDEILTGNLRNKAMYLQRDNRRYGDMKDRILLSLRSLQ 1057

Query: 2495 KEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
             EA+ WF+SSC   E+  LA+AWYHVTYH  Y   G   LSFPW + D+LL  K
Sbjct: 1058 NEAKEWFESSCQPKEYHPLASAWYHVTYHPSYFQEGVNCLSFPWIVGDILLNIK 1111


>ref|XP_015581229.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X2 [Ricinus
            communis]
          Length = 930

 Score = 1063 bits (2750), Expect = 0.0
 Identities = 540/893 (60%), Positives = 661/893 (74%), Gaps = 9/893 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGN-LILKQGEQLYSSSKLVPIIN 181
            DFS+   +G+S   C E+  GL  S I K+ P++ E    +IL+ GE+  S+S++VP++ 
Sbjct: 15   DFSSVKSVGQSTSFCWEIEEGLEASDIFKSFPYYTEAREEVILEDGEEWGSASEIVPLVK 74

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            C  D  +PYE+LFQLNSLVH QKIS A ++++L   L  L++DT T IL K+HKL  TCY
Sbjct: 75   CGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMILQKLHKLAVTCY 134

Query: 362  RPLYFIHDNLSRFG---KQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
             PL FI   L   G   K+   SS+KN    N+MSC R L+TPSK+Y LGPELE+ NY+V
Sbjct: 135  DPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPSKIYCLGPELESSNYVV 194

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            K++++YASDF+RVTF +ED  KLP  AISM I + IF+K +RTGIY+R+L++LRDGI IG
Sbjct: 195  KNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSILRDGIVIG 254

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
            +KKFEFLAFSASQLR NS WMFASND   A +IREWMG F++I+S+SKCAARMGQLFSSS
Sbjct: 255  AKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAARMGQLFSSS 314

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
              TF V   D+ +IPDIE  +DG+ YCFSDGIGKISL FARQVA+KCGL+ TPSAFQIRY
Sbjct: 315  KQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRTPSAFQIRY 374

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIAVDR SF KLSLR SM KF+S N MLNVTK SES PC+LNREI+TLL+TLGV 
Sbjct: 375  GGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIITLLTTLGVK 434

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLML 1429
            D IFE LQ  Q +LL+ MLT  E+AL VL  +  +  K   +KML  GY P+ EPYL M+
Sbjct: 435  DEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPNVEPYLSMM 494

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFF 1609
            L+AY E  L ++RSRCR+FVPKGR+LIGCLDE   LDYGQVYVR+TM + EL++ +Q  F
Sbjct: 495  LQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDADQASF 554

Query: 1610 SKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPN 1789
             ++D++TA        TKNPCLHPGDIRVLEAVY+ +L+   GLVDC++FPQKG+RPHPN
Sbjct: 555  HRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEE-KGLVDCILFPQKGERPHPN 613

Query: 1790 ECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDN 1969
            ECSGGDLDGD F I WD+ L+P +T +PMDY  RR R MDH +TLEE+ KFFIDYM+ND 
Sbjct: 614  ECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDT 673

Query: 1970 LGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFME 2149
            LGAISTAHLVHAD EPDKA S+KCL+LA LHSMAVD+AKTGAPAEM K L+P +FPDFME
Sbjct: 674  LGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFME 733

Query: 2150 RLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWEAI---PYDSDLEVDGFEAFLEVAE 2320
            R+ K  Y S GVLGKLYR      +  Q S  +  E I    YD DLEV GFE F+E+A 
Sbjct: 734  RIDKKMYISGGVLGKLYRGTLDSTR-QQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAI 792

Query: 2321 EHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQK 2497
             H + Y + LS LM YY+   EDEILTG ++++ MYL  D R+Y D KDR+LI+V+ LQK
Sbjct: 793  SHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQK 852

Query: 2498 EAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            EA+ WF+S C   E   LA+AWYHVTYH  Y   G   LSFPW + D+LL  K
Sbjct: 853  EAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNIK 905


>ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Ricinus
            communis]
 gb|EEF52033.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
          Length = 983

 Score = 1063 bits (2750), Expect = 0.0
 Identities = 540/893 (60%), Positives = 661/893 (74%), Gaps = 9/893 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGN-LILKQGEQLYSSSKLVPIIN 181
            DFS+   +G+S   C E+  GL  S I K+ P++ E    +IL+ GE+  S+S++VP++ 
Sbjct: 68   DFSSVKSVGQSTSFCWEIEEGLEASDIFKSFPYYTEAREEVILEDGEEWGSASEIVPLVK 127

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            C  D  +PYE+LFQLNSLVH QKIS A ++++L   L  L++DT T IL K+HKL  TCY
Sbjct: 128  CGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMILQKLHKLAVTCY 187

Query: 362  RPLYFIHDNLSRFG---KQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
             PL FI   L   G   K+   SS+KN    N+MSC R L+TPSK+Y LGPELE+ NY+V
Sbjct: 188  DPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPSKIYCLGPELESSNYVV 247

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            K++++YASDF+RVTF +ED  KLP  AISM I + IF+K +RTGIY+R+L++LRDGI IG
Sbjct: 248  KNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSILRDGIVIG 307

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
            +KKFEFLAFSASQLR NS WMFASND   A +IREWMG F++I+S+SKCAARMGQLFSSS
Sbjct: 308  AKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAARMGQLFSSS 367

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
              TF V   D+ +IPDIE  +DG+ YCFSDGIGKISL FARQVA+KCGL+ TPSAFQIRY
Sbjct: 368  KQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRTPSAFQIRY 427

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIAVDR SF KLSLR SM KF+S N MLNVTK SES PC+LNREI+TLL+TLGV 
Sbjct: 428  GGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIITLLTTLGVK 487

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLML 1429
            D IFE LQ  Q +LL+ MLT  E+AL VL  +  +  K   +KML  GY P+ EPYL M+
Sbjct: 488  DEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPNVEPYLSMM 547

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFF 1609
            L+AY E  L ++RSRCR+FVPKGR+LIGCLDE   LDYGQVYVR+TM + EL++ +Q  F
Sbjct: 548  LQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDADQASF 607

Query: 1610 SKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPN 1789
             ++D++TA        TKNPCLHPGDIRVLEAVY+ +L+   GLVDC++FPQKG+RPHPN
Sbjct: 608  HRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEE-KGLVDCILFPQKGERPHPN 666

Query: 1790 ECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDN 1969
            ECSGGDLDGD F I WD+ L+P +T +PMDY  RR R MDH +TLEE+ KFFIDYM+ND 
Sbjct: 667  ECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHDVTLEEIQKFFIDYMINDT 726

Query: 1970 LGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFME 2149
            LGAISTAHLVHAD EPDKA S+KCL+LA LHSMAVD+AKTGAPAEM K L+P +FPDFME
Sbjct: 727  LGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGAPAEMPKALKPKEFPDFME 786

Query: 2150 RLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWEAI---PYDSDLEVDGFEAFLEVAE 2320
            R+ K  Y S GVLGKLYR      +  Q S  +  E I    YD DLEV GFE F+E+A 
Sbjct: 787  RIDKKMYISGGVLGKLYRGTLDSTR-QQRSKFVWTENIAEATYDHDLEVKGFEEFVEIAI 845

Query: 2321 EHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQK 2497
             H + Y + LS LM YY+   EDEILTG ++++ MYL  D R+Y D KDR+LI+V+ LQK
Sbjct: 846  SHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRRYGDTKDRILISVKSLQK 905

Query: 2498 EAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            EA+ WF+S C   E   LA+AWYHVTYH  Y   G   LSFPW + D+LL  K
Sbjct: 906  EAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEGITCLSFPWIVADILLNIK 958


>gb|PON93354.1| RNA-dependent RNA polymerase-type [Trema orientalis]
          Length = 1123

 Score = 1060 bits (2742), Expect = 0.0
 Identities = 538/894 (60%), Positives = 649/894 (72%), Gaps = 10/894 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIIN 181
            DFS    IG S  +C E+   +  S   K  P + E L  LIL++G +  S S+ VPII 
Sbjct: 225  DFSELKSIGHSTTICWEMKEEVLASDTFKCFPCYRESLVELILEEGAEYCSVSETVPIIK 284

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            CP + ++ YE LFQLNSLVH QKIS A ++S+L ++ S LS +T   +L K+HKL STCY
Sbjct: 285  CPSNSSLGYETLFQLNSLVHTQKISFAAVDSNLIELFSSLSDETSNAVLKKLHKLKSTCY 344

Query: 362  RPLYFIHDNLSRFGK--QQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVK 535
             P+ F+  N     K  + S S+NK     N+MSC R L+TP K++ LGPELE  NY+VK
Sbjct: 345  DPMSFVKINAHILEKIPESSPSANKRLTDHNVMSCHRALITPLKIFCLGPELEKSNYVVK 404

Query: 536  HYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGS 715
            H++ YA+DF+RVTF +ED  KLP  A+S  I++ +F+K YRT IY+R+L++LRDGI IGS
Sbjct: 405  HFATYANDFMRVTFVEEDWSKLPANAVSTSIEQGMFAKPYRTAIYDRVLSILRDGIVIGS 464

Query: 716  KKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSST 895
            K++EFLAFSASQLR NS WMFASN++V A DIREWMG F +I S+SKCAARMGQLFSSST
Sbjct: 465  KRYEFLAFSASQLRSNSVWMFASNENVKAEDIREWMGCFSKIRSISKCAARMGQLFSSST 524

Query: 896  PTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYG 1075
             T  VP  DV +IPD+E   DG+ YCFSDGIGKISLPFARQVA+KCGLSHTPSAFQIRYG
Sbjct: 525  QTLTVPVQDVEIIPDVEVTRDGIDYCFSDGIGKISLPFARQVAQKCGLSHTPSAFQIRYG 584

Query: 1076 GYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDD 1255
            GYKGVIAVDR S+ KLSLR SMLKF+S N MLNVTK S++ PCFLNREIVTLLSTLGV D
Sbjct: 585  GYKGVIAVDRNSYRKLSLRSSMLKFESKNRMLNVTKWSDAMPCFLNREIVTLLSTLGVKD 644

Query: 1256 GIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGS-GIKTAVKMLTHGYGPDSEPYLLMLL 1432
             +F  LQ +Q RLL  M T  EAAL VL ++ GS      VKML  GY P+ EPYL M+L
Sbjct: 645  EVFLALQQEQLRLLGKMRTDREAALNVLEKLNGSDSSNILVKMLLQGYEPNMEPYLSMML 704

Query: 1433 KAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFS 1612
            ++Y E QLSD++SRCRVFVPKGRVLIGCLDE GTLDYGQ++VR++M + EL   NQ+FF 
Sbjct: 705  QSYYENQLSDLKSRCRVFVPKGRVLIGCLDETGTLDYGQIFVRISMTKAELETGNQDFFR 764

Query: 1613 KIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNE 1792
            K+D  T+        TKNPCLHPGDIRVLEA+Y+ +L+   GLVDCLVFPQKG+RPHPNE
Sbjct: 765  KVDDKTSIVLGKLVVTKNPCLHPGDIRVLEAIYNAELEE-KGLVDCLVFPQKGERPHPNE 823

Query: 1793 CSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNL 1972
            CSGGDLDGDLF I WD  L+PP+T   MDYI RR R+M H +T+EE+ KFF+DYM+ND L
Sbjct: 824  CSGGDLDGDLFFISWDSGLIPPRTTPAMDYIGRRPRIMAHDVTIEEIQKFFVDYMINDTL 883

Query: 1973 GAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMER 2152
            G ISTAHLVHAD EPDKA S KCL+LA LHSMAVD+AKTGAPAEM K L+P +FPDFMER
Sbjct: 884  GTISTAHLVHADREPDKAFSEKCLQLATLHSMAVDFAKTGAPAEMPKVLKPREFPDFMER 943

Query: 2153 LGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITW-----EAIPYDSDLEVDGFEAFLEVA 2317
            L K  Y SNGVLG+LYRA  S     Q   ++ W     +AI YD DLEV GFE F+  A
Sbjct: 944  LDKPMYISNGVLGQLYRATVSSK--MQECSNLVWSEEIAQAI-YDRDLEVSGFEDFIATA 1000

Query: 2318 EEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQ 2494
            E H + Y D LS +M YY +  EDE+LTG  R R  YL  D R+Y D KDR+L+ ++ L 
Sbjct: 1001 ESHRDMYMDKLSGIMNYYGVETEDEVLTGNFRKRAAYLQRDNRRYGDTKDRILLLLKNLH 1060

Query: 2495 KEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
             EA GWFK+SC       +A+AWYHVTYH  +    +  LSFPW   D+LL  K
Sbjct: 1061 SEARGWFKNSCEVQNHQQMASAWYHVTYHPDFFHKSKNCLSFPWIKGDILLNIK 1114


>ref|XP_021591741.1| RNA-dependent RNA polymerase 2 [Manihot esculenta]
 gb|OAY30901.1| hypothetical protein MANES_14G068000 [Manihot esculenta]
 gb|OAY30902.1| hypothetical protein MANES_14G068000 [Manihot esculenta]
          Length = 1120

 Score = 1060 bits (2741), Expect = 0.0
 Identities = 533/894 (59%), Positives = 658/894 (73%), Gaps = 10/894 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIIN 181
            DFS+   IG++   C E+  GL  S I  + P++ E   +++L+ GE+ +S+S++VP+  
Sbjct: 221  DFSSVKSIGQATSFCWEIEEGLEASDIFTSFPYYIEDRKDIVLEDGEEFHSTSEIVPLAK 280

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            C  D  + YE+LFQLNSLVH  KIS A++++DL  +L  L++DT   IL K+HKL  TCY
Sbjct: 281  CGSDSKLAYEILFQLNSLVHTHKISLASVDTDLINILGSLTIDTAMIILQKLHKLTFTCY 340

Query: 362  RPLYFIHDNLSRFG---KQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
             PL FI   L   G   K+  +SS KN    N+  C R L+TPSK+Y LGPELE  NY+V
Sbjct: 341  DPLSFIKKQLHVPGRNLKKPFISSRKNFTDHNITICHRALITPSKIYCLGPELEASNYVV 400

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            K++++YASDF+R+TF +ED  KLP  AIS  I + IF+K +RT IY+RML+VLRDGI IG
Sbjct: 401  KNFASYASDFMRITFVEEDWSKLPANAISTSIQQGIFAKPFRTEIYHRMLSVLRDGIVIG 460

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
            +K+FEFLAFSASQLR NS WMFASND V A DIREWMG F++I S+SKCAARMGQLFS+S
Sbjct: 461  AKRFEFLAFSASQLRSNSVWMFASNDDVKAEDIREWMGCFNKIRSISKCAARMGQLFSAS 520

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
              TF VP+ DV +IPDIE  +DG+ YCFSDGIGKISL FARQVA+KCGL+ TPSAFQIRY
Sbjct: 521  RQTFVVPAQDVEIIPDIEVNSDGIGYCFSDGIGKISLSFARQVAQKCGLNQTPSAFQIRY 580

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIAVDR S  KLSLR SMLKF+S N MLNVTK SES PC+LNREI++LLSTLGV 
Sbjct: 581  GGYKGVIAVDRDSCRKLSLRGSMLKFESENRMLNVTKWSESMPCYLNREIISLLSTLGVK 640

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLML 1429
            D  FE LQ  Q RLL  ML+  EAAL  L  +  +  K   VKML  GY P+ EPYL M+
Sbjct: 641  DETFEGLQQQQLRLLGRMLSNREAALDALENLSWADSKNLLVKMLLQGYEPNVEPYLSMM 700

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFF 1609
            L+AY E  L ++RSRCR+FVPKGR+LIGCLDE G LDYGQVYV +TM + EL+N +Q +F
Sbjct: 701  LQAYHENLLVELRSRCRIFVPKGRILIGCLDESGLLDYGQVYVCITMTKAELQNIDQSYF 760

Query: 1610 SKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPN 1789
             ++D+ T+        TKNPCLHPGD+RVL+AVY+ +L+   GLVDC++FPQKG+RPHPN
Sbjct: 761  RRVDEKTSIVTGKVVVTKNPCLHPGDVRVLDAVYEVELEE-QGLVDCILFPQKGERPHPN 819

Query: 1790 ECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDN 1969
            ECSGGDLDGDLF I WD+ L+P +TV+PMDY+ RR R+MDH +TLEE+ KFF+DYM+ND 
Sbjct: 820  ECSGGDLDGDLFFISWDKGLIPSQTVSPMDYLGRRPRIMDHNVTLEEIQKFFVDYMINDT 879

Query: 1970 LGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFME 2149
            LGAISTAHLVHAD EPDKA S KCL+LA LHSMAVD+AKTGAPAEM + L+P +FPDFME
Sbjct: 880  LGAISTAHLVHADREPDKARSDKCLQLAALHSMAVDFAKTGAPAEMPRFLKPKEFPDFME 939

Query: 2150 RLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLEVA 2317
            R  K+TY SNGVLGKLYR        S+      W        YD DLEV GFE F+++A
Sbjct: 940  RTDKTTYISNGVLGKLYRGIV--GSTSREGSKFVWSEKIAEATYDRDLEVKGFEEFIDMA 997

Query: 2318 EEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQ 2494
              H + Y + LS LMKYY+ TYEDEILTG +R + MYL  D R+Y DMKDR++++++ LQ
Sbjct: 998  LSHRDIYVEKLSGLMKYYEATYEDEILTGNLRKKAMYLQRDNRRYGDMKDRIMLSLKSLQ 1057

Query: 2495 KEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
             E + WF+SSC   E   LA+AWYHVTYH  Y   G   LSFPW + D+LL  K
Sbjct: 1058 NEVKEWFESSCQPKEHQPLASAWYHVTYHPSYFQEGVNCLSFPWIVGDILLNIK 1111


>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score = 1059 bits (2739), Expect = 0.0
 Identities = 542/894 (60%), Positives = 662/894 (74%), Gaps = 10/894 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIIN 181
            DFS ++ IG S   C EL  GL +S IL++ P++ E LG+LI+++ EQ    S+LVP+IN
Sbjct: 218  DFSESNSIGWSSSFCWELEEGLLSSDILRSFPYYKEELGDLIVEKEEQFCCESELVPLIN 277

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSD-LFKVLSGLSVDTVTRILMKMHKLNSTC 358
              +D T+ YE+L+QLNSLVH QK+S   + SD L ++L  LSVDT    L+++HK+ STC
Sbjct: 278  SGLDSTLAYEILYQLNSLVHTQKVSLRAVKSDDLIEILCCLSVDTANGFLLQLHKMKSTC 337

Query: 359  YRPLYFIHDNLSRFGKQQS--LSSNKNGPQE-NLMSCRRVLVTPSKVYFLGPELETCNYI 529
            Y PL  I   LS   + Q   LSS++ G +E NLMSC RVLVTP+K+Y LGPELE  N +
Sbjct: 338  YDPLPIIQRQLSSLLRNQKSLLSSSQRGLREGNLMSCHRVLVTPTKIYCLGPELEKSNCV 397

Query: 530  VKHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISI 709
            V+HY+AY+SDFLRV+F +ED  KL   A+S  I++ IFSK YRT IY R+L++LRDGI I
Sbjct: 398  VRHYAAYSSDFLRVSFVEEDWTKLHSGALSTSIEEGIFSKPYRTRIYYRILSILRDGIKI 457

Query: 710  GSKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSS 889
            G+K+FEFLAFSASQLR NS WMFASN++V A +IREWMG F++I SVSKCAARMGQLFSS
Sbjct: 458  GAKRFEFLAFSASQLRSNSVWMFASNETVKAENIREWMGSFNKIRSVSKCAARMGQLFSS 517

Query: 890  STPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIR 1069
            S     V +H V +IPD+E   DG++YCFSDGIGKIS  FAR+VA+KCGLS TPSAFQIR
Sbjct: 518  SVEASKVQAHHVEIIPDVEITRDGIQYCFSDGIGKISQSFAREVAQKCGLSQTPSAFQIR 577

Query: 1070 YGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGV 1249
            YGGYKGVIAVDR SFCKLSLRPSMLKF SN+  LNVTK SES PC+LNREIV+LLSTLGV
Sbjct: 578  YGGYKGVIAVDRNSFCKLSLRPSMLKFDSNDRTLNVTKWSESMPCYLNREIVSLLSTLGV 637

Query: 1250 DDGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLLML 1429
            +D  FE+LQ  Q  LLD MLT  EAAL VL    G      VKML HGY P  EPYL M+
Sbjct: 638  EDEKFEMLQCKQISLLDKMLTNREAALDVLECTAGDAKTVLVKMLLHGYEPGVEPYLSMI 697

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFF 1609
            L+A+RE+QLSDIRS+CR+ VPKGRVL+GCLDE G L+YGQV++RVTM + E  + +Q FF
Sbjct: 698  LRAHREHQLSDIRSKCRILVPKGRVLLGCLDETGILNYGQVFIRVTMTKAEQCHDDQSFF 757

Query: 1610 SKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPN 1789
             ++D++T+        TKNPCLHPGDIRVL+A+Y+  L+   GLVDCLVFPQKG+RPHPN
Sbjct: 758  HQVDETTSIVIGKVVITKNPCLHPGDIRVLDAIYESALEE-KGLVDCLVFPQKGERPHPN 816

Query: 1790 ECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDN 1969
            ECSGGDLDGDLF + WDE L+P +T  PMDYI RR R+MDH++TLEE+ K+F++YM+ND 
Sbjct: 817  ECSGGDLDGDLFFVCWDENLIPSQTDTPMDYIGRRSRLMDHEVTLEEIQKYFVNYMINDT 876

Query: 1970 LGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFME 2149
            LG ISTAH++HAD EP KA S KCL+LA LHSMAVD+AKTGAPAEM + L+P ++PDFME
Sbjct: 877  LGVISTAHVIHADREPSKARSPKCLQLAALHSMAVDFAKTGAPAEMPRVLKPKEYPDFME 936

Query: 2150 RLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLEVA 2317
            R  +  Y S G+LGKLYR+     K      D  W        YD DLEV GFE+F+E A
Sbjct: 937  RGDRPMYASPGILGKLYRSTIDSTK--NQEPDFVWNEEVAQAAYDKDLEVRGFESFVETA 994

Query: 2318 EEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQ 2494
            E H   Y + LS LM YY    EDEILTG +RS  + L  DK +Y +MKDRVLIAVR LQ
Sbjct: 995  ESHKKLYTEKLSTLMNYYGARSEDEILTGNLRSPSLCLQRDKIRYGEMKDRVLIAVRNLQ 1054

Query: 2495 KEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            KEA+GWF SSC   E   +A+AWYHVTYH KY  +G   LSFPW + D+LL  K
Sbjct: 1055 KEAKGWFHSSCKSHECHKMASAWYHVTYHPKYCHNGMNSLSFPWILDDILLNIK 1108


>gb|PKA52670.1| putative RNA-dependent RNA polymerase 2 [Apostasia shenzhenica]
          Length = 1120

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 548/896 (61%), Positives = 659/896 (73%), Gaps = 12/896 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGELGNLILKQGEQLYSSSKLVPIINC 184
            DFS+T  +G   + CLEL   +  S ILK+LPF  E+G+LI ++ E   S  +LVPII+C
Sbjct: 218  DFSSTKAVGMCFYFCLELGKRVPVSDILKSLPFPCEMGDLIPRKREPFCSLLELVPIISC 277

Query: 185  PVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCYR 364
            P    +PYE+LFQLNSLVH QKIS      +LF  L     DTV  I+MKMHKL STC  
Sbjct: 278  P---ELPYEILFQLNSLVHTQKISILQA-FNLFDFLKKEDCDTVLNIIMKMHKLKSTCSN 333

Query: 365  PLYFIHDNLSRFG-KQQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVKHY 541
            P+ FI   L      ++S++ NK    E+L  C R LVTP+KVYFLGPELE  NY++KH+
Sbjct: 334  PVQFIDRELQCMRTSKKSMTVNKRSLPEHLNYCHRALVTPAKVYFLGPELENSNYVIKHF 393

Query: 542  SAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGSKK 721
            SAYASDFLRV+F DED  KL  +AIS RI+    S+ Y+T IYNRML+VLRDGI+IGSK+
Sbjct: 394  SAYASDFLRVSFVDEDWGKLSSDAISTRIELGFVSELYKTKIYNRMLSVLRDGIAIGSKQ 453

Query: 722  FEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSSTPT 901
            FEFLAFSASQLR NS WMFASN  V+A  IR+WMG F++I SVSKCAARMGQ FSSS P 
Sbjct: 454  FEFLAFSASQLRGNSCWMFASNGDVSAETIRKWMGDFNKIRSVSKCAARMGQQFSSSFPA 513

Query: 902  FNVPSHDVRVIPDIETVTD------GMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQ 1063
              V S +V +I DI + +D      G+KYCFSDGIGKISL FA Q++++CGL  TPSAFQ
Sbjct: 514  MPVQSKEVDIIEDIYSFSDSNSDANGVKYCFSDGIGKISLSFAEQISRRCGLDKTPSAFQ 573

Query: 1064 IRYGGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTL 1243
            IRYGGYKGVIAVD+TSFCKLSLRPSMLKF SNNTMLN+T  S+  PC+LNREI+ LLSTL
Sbjct: 574  IRYGGYKGVIAVDQTSFCKLSLRPSMLKFDSNNTMLNITSYSKYLPCYLNREIICLLSTL 633

Query: 1244 GVDDGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKTAVKMLTHGYGPDSEPYLL 1423
            G+DD +FE +Q DQ  +LDDML     ALTV+ ++ G     A  +L HGY P+SEPYL 
Sbjct: 634  GIDDAVFEAMQQDQMSILDDMLKNKAVALTVIGKISGPEKGKAESLLMHGYEPNSEPYLS 693

Query: 1424 MLLKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQE 1603
            MLLKAYR YQLSDIRSRCR+FVPKGR+L+GCLDE GTLDYGQV++R+T+ +EEL N NQ 
Sbjct: 694  MLLKAYRAYQLSDIRSRCRIFVPKGRILLGCLDESGTLDYGQVFLRITLTKEELGNMNQV 753

Query: 1604 FFSKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPH 1783
            FF + D STA        TKNPCLHPGDIRVLEAVYD  LD  MG VDC+VFPQKG+RPH
Sbjct: 754  FFKEADHSTAVITGKVMVTKNPCLHPGDIRVLEAVYDLHLDE-MGFVDCVVFPQKGKRPH 812

Query: 1784 PNECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMN 1963
            PNECSGGDLDGDL+ I WDERL+PP+T  P+DYI    R+ DH++TL E+ KFF++YM+N
Sbjct: 813  PNECSGGDLDGDLYFISWDERLMPPQTDPPLDYIGLSSRLQDHEVTLVEIQKFFVNYMIN 872

Query: 1964 DNLGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDF 2143
            D+LGAISTAHLV+ADSEP KA S KCL+LA+LHSMAVD+AKTG PAEM + LRP +FPDF
Sbjct: 873  DSLGAISTAHLVYADSEPLKARSPKCLELASLHSMAVDFAKTGVPAEMPRILRPKEFPDF 932

Query: 2144 MERLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLE 2311
            MER  +  Y S G+LGKLYRA +SH   S  + +  W     A  YD DLEV+GFE FL+
Sbjct: 933  MERWDRPMYPSKGILGKLYRATSSHN--SSETSETIWSRELAAASYDMDLEVEGFEMFLK 990

Query: 2312 VAEEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMY-LNDKRKYEDMKDRVLIAVRG 2488
             A++HYNQYA+ LS LM Y+    EDEILTGY+RS   Y L DK+K+ DM DR+ IAVR 
Sbjct: 991  PAKDHYNQYAEKLSFLMNYFGAKSEDEILTGYMRSCSDYVLKDKKKFGDMIDRITIAVRC 1050

Query: 2489 LQKEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            L +E + W      ESE    A+AWYHVTYH  +   G +FLSFPW +CDVL+  K
Sbjct: 1051 LHEEVKSWLTGG-RESESMRTASAWYHVTYHPDFWSPG-KFLSFPWIVCDVLMSIK 1104


>ref|XP_007211312.1| RNA-dependent RNA polymerase 2 [Prunus persica]
 gb|ONI08412.1| hypothetical protein PRUPE_5G176700 [Prunus persica]
          Length = 1118

 Score = 1057 bits (2733), Expect = 0.0
 Identities = 537/894 (60%), Positives = 654/894 (73%), Gaps = 10/894 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFF--GELGNLILKQGEQLYSSSKLVPII 178
            DFS    IG S   C E+    S S + +  P++   ++ +LIL  GE+  S S+ VP++
Sbjct: 219  DFSDMKSIGYSTSFCWEIEEEFSVSDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLV 278

Query: 179  NCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTC 358
             C  D  +PYE+LFQLN+LVH QKIS A  +SDL + LSGLSVDT   +L K+HK  +TC
Sbjct: 279  KCRSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTC 338

Query: 359  YRPLYFIHDNLSRFGKQQSL--SSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
            Y PL F+   L    +      S  K   + N+MSC RVL+TPSK+  LGPELE  NY+V
Sbjct: 339  YDPLSFLKMQLHVLERNHKSRPSPYKRLMEHNVMSCHRVLITPSKICCLGPELEKSNYVV 398

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            K+++AYASDF+RVTF DED  KLP  AIS  I + IF+K +RTGIY+RML++LRDGI IG
Sbjct: 399  KNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIG 458

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
             K+FEFLAFSASQLR +S WMF+SND+V A DIREWMG F +I S+SKCAARMGQLFSSS
Sbjct: 459  EKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSS 518

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
            T T  VP+ DV +IPD+ET +DG+ YCFSDGIGKISL FAR+VA+KCGL  TPSAFQIRY
Sbjct: 519  TQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRY 578

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIAVD  SF KLSLR SMLKF+S N MLNVTK S++ PC+LNREI++LLSTLGV 
Sbjct: 579  GGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVK 638

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIK-TAVKMLTHGYGPDSEPYLLML 1429
            D  FE LQ +Q RLL  M T+  AAL V  R+ G+  K T VKML HGY P++EPYL M+
Sbjct: 639  DETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEPNAEPYLSMM 698

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFF 1609
            L+AY E  LSD++SRCR+FVPKGRVL+GCLDE G LDYGQVYVR+TM + E    +Q FF
Sbjct: 699  LQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFF 758

Query: 1610 SKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPN 1789
             K+D++T         TKNPCLHPGD+RVL+AVYD  L+    +VDCL+FPQKG+RPHPN
Sbjct: 759  QKVDETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEE-KNMVDCLIFPQKGERPHPN 817

Query: 1790 ECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDN 1969
            ECSGGDLDGDLF I WD+ LVP  TV PMDY +RR R+MDH +TLEE+ KFF+DYM+NDN
Sbjct: 818  ECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDN 877

Query: 1970 LGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFME 2149
            LGAISTAHLVHAD EPDKAL+ KCL+LA+LHSMAVD+AKTGAPAEMS+ L+P +FPDFME
Sbjct: 878  LGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFME 937

Query: 2150 RLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLEVA 2317
            R+ K  Y SNG LGKLYRA        Q   ++ W        YD DLEVDG E+ LEVA
Sbjct: 938  RVDKPMYISNGALGKLYRAVV--GSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVA 995

Query: 2318 EEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQ 2494
            + H + Y + +  +M YY    EDEILTG +R+R  YL  D R+Y DMKDR+ ++++ LQ
Sbjct: 996  KGHRDMYIEKMRTMMNYYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQ 1055

Query: 2495 KEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            KEA+G F+SSC  SE   +A+AWYHVTYH  Y       LSFPW + D+LL  K
Sbjct: 1056 KEAKGLFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIK 1109


>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
            [Prunus mume]
          Length = 1100

 Score = 1053 bits (2722), Expect = 0.0
 Identities = 536/894 (59%), Positives = 652/894 (72%), Gaps = 10/894 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFF--GELGNLILKQGEQLYSSSKLVPII 178
            DFS    IG S   C E+    S S + +  P++   ++ +LIL  GE+  S S+ VP++
Sbjct: 201  DFSDMKSIGYSTSFCWEIEEEFSLSDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLV 260

Query: 179  NCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTC 358
             C  D  +PYE+LFQLN+LVH QKIS A  +SDL + LSGLSVDT   +L K+HK  +TC
Sbjct: 261  KCGSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKLHKRKTTC 320

Query: 359  YRPLYFIHDNLSRFGKQQSL--SSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
            Y P  F+   L    +      S  K   + N+MSC RVL+TPSK+  LGPELE  NY+V
Sbjct: 321  YDPQSFLKMQLHVLERNHKSRPSPYKRLTEHNVMSCHRVLITPSKICCLGPELEKSNYVV 380

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            K+++AYASDF+RVTF DED  KLP  AIS  I + IF+K +RTGIY+RML++LRDGI IG
Sbjct: 381  KNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIG 440

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
             K FEFLAFSASQLR +S WMF+SND+V A DIREWMG F +I S+SKCAARMGQLFSSS
Sbjct: 441  EKNFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSS 500

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
            T T  VP+ DV +IPD+ET +DG+ YCFSDGIGKISL FAR+VA+KCGL  TPSAFQIRY
Sbjct: 501  TQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRY 560

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIAVD  SF KLSLR SMLKF+S NTMLNVTK S++ PC+LNREI++L+STLGV 
Sbjct: 561  GGYKGVIAVDCRSFRKLSLRSSMLKFESKNTMLNVTKWSDAMPCYLNREIISLMSTLGVK 620

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIK-TAVKMLTHGYGPDSEPYLLML 1429
            D  FE LQ +Q RLL  M T+  AAL VL R+ G+  K T VKML HGY P+ EPYL M+
Sbjct: 621  DETFEALQEEQLRLLGKMRTERGAALNVLERLNGADSKNTLVKMLLHGYEPNVEPYLSMM 680

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFF 1609
            L+AY E  LSD++SRCR+FVPKGRVL+GCLDE G LDYGQVYVR+TM + E    +Q FF
Sbjct: 681  LQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFF 740

Query: 1610 SKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPN 1789
             K+D++T         TKNPCLHPGD+RVL+AVYD  L+    +VDCL+FPQKG+RPHPN
Sbjct: 741  QKVDETTCIVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEE-KNMVDCLIFPQKGERPHPN 799

Query: 1790 ECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDN 1969
            ECSGGDLDGDLF I WD+ LVP  TV PMDY +RR R+MDH +TLEE+ KFF+DYM+NDN
Sbjct: 800  ECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDN 859

Query: 1970 LGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFME 2149
            LGAISTAHLVHAD EPDKAL+ KCL+LA+LHSMAVD+AKTGAPAEMS+ L+P +FPDFME
Sbjct: 860  LGAISTAHLVHADHEPDKALNPKCLQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFME 919

Query: 2150 RLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLEVA 2317
            R+ K  Y SNG LGKLYRA        Q   ++ W        YD DLEVDG E+ LEVA
Sbjct: 920  RVDKPMYISNGALGKLYRAVV--GSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVA 977

Query: 2318 EEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQ 2494
            + H + Y + +  +M  Y    EDEILTG +R+R  YL  D R+Y DMKDR+ ++++ LQ
Sbjct: 978  KGHRDTYIEKMRTIMNNYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQ 1037

Query: 2495 KEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            KEA+G F+SSC  SE   +A+AWYHVTYH  Y       LSFPW + D+LL  K
Sbjct: 1038 KEAKGMFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIK 1091


>ref|XP_018831642.1| PREDICTED: RNA-dependent RNA polymerase 2 [Juglans regia]
          Length = 1110

 Score = 1051 bits (2717), Expect = 0.0
 Identities = 539/890 (60%), Positives = 657/890 (73%), Gaps = 6/890 (0%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFFGE-LGNLILKQGEQLYSSSKLVPIIN 181
            DFS T  IG+S     E+  GLS S I K  P + E + +LIL+ GE+  S+S +VP++ 
Sbjct: 214  DFSVTKSIGQSTSFYWEI-EGLSASDIFKCFPRYREDMKDLILEDGEEFRSTSTIVPLVK 272

Query: 182  CPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTCY 361
            C + C + YE+LFQLNSLVH QKI  A   +DL ++LS L+V+T   IL K+HKLN TCY
Sbjct: 273  CELSCNLAYEILFQLNSLVHTQKICLAGAGADLIEILSRLNVETALMILQKLHKLNFTCY 332

Query: 362  RPLYFIHDNLSRFGK--QQSLSSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIVK 535
             P+ F+   L   G+  ++   S+      N+MSC R LVTPSK+Y LGPELE+ NY+VK
Sbjct: 333  EPVSFVKMQLHVLGRNCKRVPPSSYKSLDPNVMSCHRALVTPSKIYCLGPELESSNYVVK 392

Query: 536  HYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIGS 715
            +++ YASDF+RV+F +ED  KLP  AIS  I++ IF+K +RTGIY+R+L+VLRDGI IG 
Sbjct: 393  NFAPYASDFMRVSFVEEDWGKLPANAISTSIERGIFAKPFRTGIYHRILSVLRDGIVIGP 452

Query: 716  KKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSST 895
            K+FEFLAFSASQLR NS WMFASN+ V A DIREWMG F++I SVSKCAARMGQLFSSS 
Sbjct: 453  KRFEFLAFSASQLRSNSVWMFASNEKVKAEDIREWMGCFNKIRSVSKCAARMGQLFSSSF 512

Query: 896  PTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRYG 1075
             T  VP  DV +IPD+E  +DG+ YCFSDGIGKISL FA QVA+KCGL+ TPSAFQIRYG
Sbjct: 513  QTLVVPIQDVEIIPDVEVTSDGIDYCFSDGIGKISLSFAGQVAQKCGLNQTPSAFQIRYG 572

Query: 1076 GYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVDD 1255
            GYKGV+AVDR S+ KLSLR SMLKF+S   MLNVTK SES PC+LNREI++LLSTLGV+D
Sbjct: 573  GYKGVVAVDRDSYMKLSLRGSMLKFESKTRMLNVTKWSESMPCYLNREIISLLSTLGVED 632

Query: 1256 GIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIKT-AVKMLTHGYGPDSEPYLLMLL 1432
             +FE LQ +Q  LL  ML+  EAAL VL  + GS  +   VKML  GY P+ EPYL M+L
Sbjct: 633  QVFEKLQEEQLCLLGKMLSNREAALNVLQSLNGSDSRNILVKMLLQGYEPNQEPYLSMML 692

Query: 1433 KAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFFS 1612
            +A+ E  LSD++SRCR+FVPKGR+L+GCLDE G L+YGQVYVRVTM + EL++ +Q FF 
Sbjct: 693  QAHYENLLSDLKSRCRIFVPKGRILVGCLDETGILNYGQVYVRVTMTKAELQSWDQSFFR 752

Query: 1613 KIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPNE 1792
            K+D +T         TKNPCLHPGDIRVLEA+Y+  L+   GLVDCLVFPQKG+RPHPNE
Sbjct: 753  KVDDATCVIVGSVVVTKNPCLHPGDIRVLEAIYEVDLEE-RGLVDCLVFPQKGERPHPNE 811

Query: 1793 CSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDNL 1972
            CSGGDLDGD F I WD+ L+P +   PMDY  RR RVMDH +TLEE+ KFF+DYM+ND L
Sbjct: 812  CSGGDLDGDQFFISWDKDLIPSQIEPPMDYTGRRPRVMDHDVTLEEIQKFFVDYMINDTL 871

Query: 1973 GAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFMER 2152
            GAISTAHLV AD EPDKA S KCL+LANLHS+AVD+AKTGAPAEM + L+P +FPDFMER
Sbjct: 872  GAISTAHLVLADREPDKARSKKCLELANLHSIAVDFAKTGAPAEMPRVLKPKEFPDFMER 931

Query: 2153 LGKSTYKSNGVLGKLYRAATSHA-KCSQNSMDITWEAIPYDSDLEVDGFEAFLEVAEEHY 2329
            + K  Y SNGVLGKLY A    A +   N +      + YD +LEVDGFEAFLE+AE H 
Sbjct: 932  IEKPMYTSNGVLGKLYHAILGSATRERSNLVSEKIGQVIYDHNLEVDGFEAFLEIAESHK 991

Query: 2330 NQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQKEAE 2506
             QY + LS LMKYY    EDEILTG +R+R+ YL  D RKY DMKDR+L +V+ LQ EA+
Sbjct: 992  EQYIEKLSTLMKYYGAENEDEILTGNLRNREAYLQRDNRKYGDMKDRILHSVKRLQNEAK 1051

Query: 2507 GWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
             W +SSC   E   LA+AWYHV++H  YS  G   LSFPW + D+LL  K
Sbjct: 1052 EWVESSCKNHEHQQLASAWYHVSFHPSYSREGFNCLSFPWILGDILLNIK 1101


>ref|XP_021825973.1| RNA-dependent RNA polymerase 2 isoform X1 [Prunus avium]
          Length = 1118

 Score = 1049 bits (2713), Expect = 0.0
 Identities = 534/894 (59%), Positives = 652/894 (72%), Gaps = 10/894 (1%)
 Frame = +2

Query: 5    DFSATSVIGRSCFLCLELANGLSTSKILKTLPFF--GELGNLILKQGEQLYSSSKLVPII 178
            DFS    IG S   C E+    S S + +  P++   ++ +LIL  GE+  S S+ VP++
Sbjct: 219  DFSDMKSIGYSTSFCWEIEEEFSVSDVFECFPYYKDNDVVDLILDNGEKYCSPSETVPLV 278

Query: 179  NCPVDCTVPYEVLFQLNSLVHMQKISSANINSDLFKVLSGLSVDTVTRILMKMHKLNSTC 358
             C  D  +PYE+LFQLN+LVH QKIS A  +SDL + LSGLSVDT   +L K+HK  +TC
Sbjct: 279  KCRSDSKLPYEILFQLNALVHSQKISLAAADSDLIEFLSGLSVDTTNVLLEKLHKRKTTC 338

Query: 359  YRPLYFIHDNLSRFGKQQSL--SSNKNGPQENLMSCRRVLVTPSKVYFLGPELETCNYIV 532
              PL F+   L    +      S  K   + N+MSC RVL+TPSK+  LGPELE  NY+V
Sbjct: 339  SDPLSFLKMQLHVLERNHKSRPSPYKRLMEHNVMSCHRVLITPSKICCLGPELEKSNYVV 398

Query: 533  KHYSAYASDFLRVTFADEDRCKLPVEAISMRIDKDIFSKHYRTGIYNRMLAVLRDGISIG 712
            K+++AYASDF+RVTF DED  KLP  AIS  I + IF+K +RTGIY+RML++LRDGI IG
Sbjct: 399  KNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSILRDGIVIG 458

Query: 713  SKKFEFLAFSASQLRDNSAWMFASNDSVTANDIREWMGQFDEIYSVSKCAARMGQLFSSS 892
             K+FEFLAFSASQLR +S WMF+SND+V A DIREWMG F +I S+SKCAARMGQLFSSS
Sbjct: 459  EKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARMGQLFSSS 518

Query: 893  TPTFNVPSHDVRVIPDIETVTDGMKYCFSDGIGKISLPFARQVAKKCGLSHTPSAFQIRY 1072
            T T  VP+ DV +IPD+ET +DG+ YCFSDGIGKISL FAR+VA+KCGL  TPSAFQIRY
Sbjct: 519  TQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTPSAFQIRY 578

Query: 1073 GGYKGVIAVDRTSFCKLSLRPSMLKFKSNNTMLNVTKCSESQPCFLNREIVTLLSTLGVD 1252
            GGYKGVIAVD  SF KLSLR SMLKF+S N MLNVTK S++ PC+LNREI++LLSTLGV 
Sbjct: 579  GGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREIISLLSTLGVK 638

Query: 1253 DGIFEVLQHDQTRLLDDMLTKSEAALTVLSRMRGSGIK-TAVKMLTHGYGPDSEPYLLML 1429
            D  FE LQ +Q RLL  M T+  AAL VL R+ G+  K T VKML HGY P+ EPYL M+
Sbjct: 639  DETFEALQEEQLRLLGKMRTERGAALNVLERLNGADSKNTLVKMLLHGYEPNVEPYLSMM 698

Query: 1430 LKAYREYQLSDIRSRCRVFVPKGRVLIGCLDELGTLDYGQVYVRVTMNEEELRNPNQEFF 1609
            L+AY E  LSD++SRCR+FVPKGRVL+GCLDE G L+YGQVYVR+TM + E    +Q FF
Sbjct: 699  LQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLNYGQVYVRITMTKAEQEMGDQSFF 758

Query: 1610 SKIDQSTAXXXXXXXXTKNPCLHPGDIRVLEAVYDHKLDNVMGLVDCLVFPQKGQRPHPN 1789
             K+D++T         TKNPCLHPGD+RVL+AVYD  L+    +VDCL+FPQKG+RPHPN
Sbjct: 759  QKVDETTCIVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEE-KNMVDCLIFPQKGERPHPN 817

Query: 1790 ECSGGDLDGDLFSIYWDERLVPPKTVAPMDYISRRLRVMDHKITLEEVHKFFIDYMMNDN 1969
            ECSGGDLDGDLF I WD+ LVP  TV PMDY +RR R+MDH +TLEE+ KFF+DYM+NDN
Sbjct: 818  ECSGGDLDGDLFFISWDKDLVPSYTVPPMDYSARRPRIMDHTVTLEEIQKFFVDYMINDN 877

Query: 1970 LGAISTAHLVHADSEPDKALSTKCLKLANLHSMAVDYAKTGAPAEMSKELRPSKFPDFME 2149
            LGAISTAHLVHAD EPDKAL+ KC++LA+LHSMAVD+AKTGAPAEMS+ L+P +FPDFME
Sbjct: 878  LGAISTAHLVHADREPDKALNPKCVQLADLHSMAVDFAKTGAPAEMSRTLKPKEFPDFME 937

Query: 2150 RLGKSTYKSNGVLGKLYRAATSHAKCSQNSMDITWE----AIPYDSDLEVDGFEAFLEVA 2317
            R+ K  Y SNG LGKLYRA        Q   ++ W        YD DLEVDG E+ LEVA
Sbjct: 938  RVDKPMYISNGALGKLYRAVV--GSVLQEKTNLVWSEQIAEAAYDQDLEVDGLESVLEVA 995

Query: 2318 EEHYNQYADSLSALMKYYDITYEDEILTGYVRSRQMYL-NDKRKYEDMKDRVLIAVRGLQ 2494
            + H + Y + +  +M YY    EDEILTG +R+R  YL  D R+Y DMKDR+ ++++ LQ
Sbjct: 996  KGHRDMYIEKMRTIMNYYGAVTEDEILTGNLRNRAAYLQRDNRRYGDMKDRISLSLKNLQ 1055

Query: 2495 KEAEGWFKSSCSESEFPGLAAAWYHVTYHTKYSGSGQRFLSFPWAICDVLLRNK 2656
            KEA+G F+SSC   E   +A+AWYHVTYH  Y       LSFPW + D+LL  K
Sbjct: 1056 KEAKGLFESSCPVGEHQRMASAWYHVTYHPSYFQQDMNCLSFPWIVGDILLNIK 1109