BLASTX nr result

ID: Ophiopogon27_contig00021574 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00021574
         (577 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251655.1| zinc finger CCHC domain-containing protein 8...    83   5e-15
ref|XP_020251651.1| zinc finger CCHC domain-containing protein 8...    83   5e-15
ref|XP_020251656.1| zinc finger CCHC domain-containing protein 8...    61   1e-07

>ref|XP_020251655.1| zinc finger CCHC domain-containing protein 8-like isoform X2
           [Asparagus officinalis]
          Length = 525

 Score = 82.8 bits (203), Expect = 5e-15
 Identities = 47/86 (54%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +2

Query: 98  HSYSPRYGPYGRYDHDNSPHAGRSPNFGRSLSDRGWQS-SAGYDGXXXXXXXXXXXXXXX 274
           HSYSPRYG Y   +H NS +AGRSP FGRSLSDRGWQ+ S+GYD                
Sbjct: 438 HSYSPRYGAY---EHSNSSNAGRSPAFGRSLSDRGWQNHSSGYD---------------- 478

Query: 275 GSRQAPADPYHSPSASLDRRFHSGSP 352
            +R  P  P HSPSASLDR  H G+P
Sbjct: 479 -NRFPPPPPGHSPSASLDRWPHGGTP 503


>ref|XP_020251651.1| zinc finger CCHC domain-containing protein 8-like isoform X1
           [Asparagus officinalis]
 ref|XP_020251652.1| zinc finger CCHC domain-containing protein 8-like isoform X1
           [Asparagus officinalis]
 ref|XP_020251653.1| zinc finger CCHC domain-containing protein 8-like isoform X1
           [Asparagus officinalis]
 ref|XP_020251654.1| zinc finger CCHC domain-containing protein 8-like isoform X1
           [Asparagus officinalis]
          Length = 528

 Score = 82.8 bits (203), Expect = 5e-15
 Identities = 47/86 (54%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +2

Query: 98  HSYSPRYGPYGRYDHDNSPHAGRSPNFGRSLSDRGWQS-SAGYDGXXXXXXXXXXXXXXX 274
           HSYSPRYG Y   +H NS +AGRSP FGRSLSDRGWQ+ S+GYD                
Sbjct: 441 HSYSPRYGAY---EHSNSSNAGRSPAFGRSLSDRGWQNHSSGYD---------------- 481

Query: 275 GSRQAPADPYHSPSASLDRRFHSGSP 352
            +R  P  P HSPSASLDR  H G+P
Sbjct: 482 -NRFPPPPPGHSPSASLDRWPHGGTP 506


>ref|XP_020251656.1| zinc finger CCHC domain-containing protein 8-like isoform X3
           [Asparagus officinalis]
 gb|ONK81355.1| uncharacterized protein A4U43_C01F28170 [Asparagus officinalis]
          Length = 502

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/89 (46%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
 Frame = +2

Query: 110 PRYGPY-----GRYDHDNSPHAG--RSPNFGRSLSDRGWQS-SAGYDGXXXXXXXXXXXX 265
           P+ G Y     G Y HD     G  RSP FGRSLSDRGWQ+ S+GYD             
Sbjct: 409 PQRGQYSDQFRGNYHHDRYRDDGQRRSPAFGRSLSDRGWQNHSSGYD------------- 455

Query: 266 XXXGSRQAPADPYHSPSASLDRRFHSGSP 352
               +R  P  P HSPSASLDR  H G+P
Sbjct: 456 ----NRFPPPPPGHSPSASLDRWPHGGTP 480


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