BLASTX nr result
ID: Ophiopogon27_contig00021468
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00021468
(371 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020243920.1| mediator of RNA polymerase II transcription ... 77 2e-15
ref|XP_020243919.1| mediator of RNA polymerase II transcription ... 77 3e-15
ref|XP_010931677.1| PREDICTED: mediator of RNA polymerase II tra... 67 1e-11
ref|XP_008810215.1| PREDICTED: mediator of RNA polymerase II tra... 67 1e-11
gb|OVA08259.1| hypothetical protein BVC80_1101g69 [Macleaya cord... 68 4e-11
gb|OVA12531.1| hypothetical protein BVC80_9011g43 [Macleaya cord... 65 1e-10
ref|XP_020113534.1| mediator of RNA polymerase II transcription ... 65 1e-10
gb|OAY81348.1| Mediator of RNA polymerase II transcription subun... 65 1e-10
ref|XP_002440628.1| mediator of RNA polymerase II transcription ... 64 2e-10
ref|XP_015640776.1| PREDICTED: mediator of RNA polymerase II tra... 63 7e-10
ref|XP_020583504.1| mediator of RNA polymerase II transcription ... 61 7e-10
ref|XP_004977068.1| mediator of RNA polymerase II transcription ... 62 2e-09
gb|PKU86758.1| Mediator of RNA polymerase II transcription subun... 60 2e-09
gb|PAN17345.1| hypothetical protein PAHAL_C01408 [Panicum hallii] 62 2e-09
ref|XP_020583500.1| mediator of RNA polymerase II transcription ... 61 3e-09
ref|XP_006654063.1| PREDICTED: mediator of RNA polymerase II tra... 61 3e-09
gb|KVI01417.1| hypothetical protein Ccrd_020306 [Cynara carduncu... 59 4e-09
ref|XP_009412106.1| PREDICTED: mediator of RNA polymerase II tra... 61 4e-09
ref|XP_010259518.1| PREDICTED: mediator of RNA polymerase II tra... 60 5e-09
gb|PON55306.1| Mediator of RNA polymerase II transcription subun... 60 5e-09
>ref|XP_020243920.1| mediator of RNA polymerase II transcription subunit 28 isoform X2
[Asparagus officinalis]
Length = 136
Score = 76.6 bits (187), Expect = 2e-15
Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ+EDQPTKEEM+RK TKS+LIDKHEKLILGWRK LK+QL KHI ELERV
Sbjct: 78 LQHEDQPTKEEMVRKEISVMEEELKTKSELIDKHEKLILGWRKELKDQLD-KHIVELERV 136
>ref|XP_020243919.1| mediator of RNA polymerase II transcription subunit 28 isoform X1
[Asparagus officinalis]
gb|ONK61615.1| uncharacterized protein A4U43_C08F31800 [Asparagus officinalis]
Length = 139
Score = 76.6 bits (187), Expect = 3e-15
Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ+EDQPTKEEM+RK TKS+LIDKHEKLILGWRK LK+QL KHI ELERV
Sbjct: 81 LQHEDQPTKEEMVRKEISVMEEELKTKSELIDKHEKLILGWRKELKDQLD-KHIVELERV 139
>ref|XP_010931677.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
[Elaeis guineensis]
Length = 145
Score = 67.4 bits (163), Expect = 1e-11
Identities = 38/60 (63%), Positives = 42/60 (70%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ EDQPTKEEM+RK KS+LI KHEKLI GWRK LK+QL KH+ ELERV
Sbjct: 87 LQREDQPTKEEMLRKEISIMEEELKAKSELIKKHEKLIQGWRKELKDQLE-KHVTELERV 145
>ref|XP_008810215.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
[Phoenix dactylifera]
Length = 145
Score = 67.4 bits (163), Expect = 1e-11
Identities = 38/60 (63%), Positives = 42/60 (70%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ EDQPTKEEM+RK KS+LI KHEKLI GWRK LK+QL KH+ ELERV
Sbjct: 87 LQREDQPTKEEMLRKEISIMEEELKAKSELIKKHEKLIQGWRKELKDQLE-KHVTELERV 145
>gb|OVA08259.1| hypothetical protein BVC80_1101g69 [Macleaya cordata]
Length = 269
Score = 68.2 bits (165), Expect = 4e-11
Identities = 48/100 (48%), Positives = 55/100 (55%), Gaps = 28/100 (28%)
Frame = -1
Query: 290 ARRLQAYLHHPRAPLVVVDVER------------------LQYEDQPTKEEMIRK----- 180
AR LQA P P +DVER LQ+E+QPTKEE +RK
Sbjct: 172 ARELQAIDRSPH-PSHQIDVERHARDFMEAAKKLQLYFIGLQHEEQPTKEETLRKEIATM 230
Query: 179 -----TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
TK++LI KHEKLI GWRK LK+QL KHI ELERV
Sbjct: 231 EEELKTKTELIKKHEKLIQGWRKELKDQLD-KHITELERV 269
>gb|OVA12531.1| hypothetical protein BVC80_9011g43 [Macleaya cordata]
Length = 135
Score = 64.7 bits (156), Expect = 1e-10
Identities = 46/101 (45%), Positives = 54/101 (53%), Gaps = 29/101 (28%)
Frame = -1
Query: 290 ARRLQAYLHHPRAPLVVVDVER------------------LQYEDQPTKEEMIRK----- 180
AR QA H P P +DVER LQ+E+QPT E+ +RK
Sbjct: 37 ARERQAIDHSPH-PSHQIDVERHAGDFMEAAKKLQLYFMGLQHEEQPTMEKTLRKEIETI 95
Query: 179 ------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
TK++LI KHEKLI GWRK LK+QL KHI ELERV
Sbjct: 96 MEEEVKTKTELIKKHEKLIQGWRKELKDQLD-KHITELERV 135
>ref|XP_020113534.1| mediator of RNA polymerase II transcription subunit 28 [Ananas
comosus]
Length = 152
Score = 65.1 bits (157), Expect = 1e-10
Identities = 37/60 (61%), Positives = 42/60 (70%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ EDQPT+EEM+RK TKS+LI KHEK+I GWRK LK QL +HI ELERV
Sbjct: 94 LQREDQPTREEMLRKEISIMEEELKTKSELIMKHEKIIQGWRKDLKEQLD-RHITELERV 152
>gb|OAY81348.1| Mediator of RNA polymerase II transcription subunit 28 [Ananas
comosus]
Length = 156
Score = 65.1 bits (157), Expect = 1e-10
Identities = 37/60 (61%), Positives = 42/60 (70%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ EDQPT+EEM+RK TKS+LI KHEK+I GWRK LK QL +HI ELERV
Sbjct: 98 LQREDQPTREEMLRKEISIMEEELKTKSELIMKHEKIIQGWRKDLKEQLD-RHITELERV 156
>ref|XP_002440628.1| mediator of RNA polymerase II transcription subunit 28 [Sorghum
bicolor]
gb|OQU77460.1| hypothetical protein SORBI_3009G050200 [Sorghum bicolor]
Length = 145
Score = 64.3 bits (155), Expect = 2e-10
Identities = 38/60 (63%), Positives = 41/60 (68%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ EDQPT EEM+RK TKS+LI KH+KLI GWRK LK QL KHI ELERV
Sbjct: 87 LQREDQPTAEEMLRKEITTMEEELKTKSELIAKHKKLIEGWRKELKEQLG-KHITELERV 145
>ref|XP_015640776.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
[Oryza sativa Japonica Group]
gb|AAV32216.1| unknown protein [Oryza sativa Japonica Group]
dbj|BAF16600.1| Os05g0154900 [Oryza sativa Japonica Group]
dbj|BAG92183.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAS92348.1| Os05g0154900 [Oryza sativa Japonica Group]
Length = 146
Score = 62.8 bits (151), Expect = 7e-10
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ ED+P+ EEM+RK TKS+LIDKH+KLI GW+K LK+QL KH+ ELERV
Sbjct: 88 LQREDRPSTEEMLRKDIAIMEEELKTKSELIDKHKKLIEGWQKELKDQLG-KHVTELERV 146
>ref|XP_020583504.1| mediator of RNA polymerase II transcription subunit 28 isoform X2
[Phalaenopsis equestris]
Length = 87
Score = 61.2 bits (147), Expect = 7e-10
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ+EDQPTKEEM+RK TKS+LI K E LI+ WRK LK QL +H AEL+RV
Sbjct: 29 LQHEDQPTKEEMLRKEISVMEEELKTKSELIKKQEGLIVAWRKELKEQLE-RHTAELQRV 87
>ref|XP_004977068.1| mediator of RNA polymerase II transcription subunit 28 [Setaria
italica]
gb|KQK99257.1| hypothetical protein SETIT_011262mg [Setaria italica]
Length = 144
Score = 61.6 bits (148), Expect = 2e-09
Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ EDQPT E+++RK TKS+LI KH+KLI GWRK LK QL KHI ELERV
Sbjct: 86 LQREDQPTAEDVLRKEITTMEEELKTKSELIAKHKKLIEGWRKELKEQLG-KHITELERV 144
>gb|PKU86758.1| Mediator of RNA polymerase II transcription subunit 28 [Dendrobium
catenatum]
Length = 72
Score = 59.7 bits (143), Expect = 2e-09
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ+EDQPTKEEM+RK TKS+LI KHE I WR+ LK QL +H AEL+RV
Sbjct: 14 LQHEDQPTKEEMLRKEISIMEDELKTKSELIKKHENRIEAWREELKEQLD-RHTAELQRV 72
>gb|PAN17345.1| hypothetical protein PAHAL_C01408 [Panicum hallii]
Length = 149
Score = 61.6 bits (148), Expect = 2e-09
Identities = 37/60 (61%), Positives = 39/60 (65%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ EDQPT EEM+RK TKS+L KH KLI GWRK LK QL KHI ELERV
Sbjct: 91 LQREDQPTAEEMLRKEITTMEEELKTKSELTAKHTKLIEGWRKELKEQLG-KHITELERV 149
>ref|XP_020583500.1| mediator of RNA polymerase II transcription subunit 28 isoform X1
[Phalaenopsis equestris]
ref|XP_020583501.1| mediator of RNA polymerase II transcription subunit 28 isoform X1
[Phalaenopsis equestris]
ref|XP_020583503.1| mediator of RNA polymerase II transcription subunit 28 isoform X1
[Phalaenopsis equestris]
Length = 143
Score = 61.2 bits (147), Expect = 3e-09
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ+EDQPTKEEM+RK TKS+LI K E LI+ WRK LK QL +H AEL+RV
Sbjct: 85 LQHEDQPTKEEMLRKEISVMEEELKTKSELIKKQEGLIVAWRKELKEQLE-RHTAELQRV 143
>ref|XP_006654063.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
[Oryza brachyantha]
Length = 144
Score = 61.2 bits (147), Expect = 3e-09
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ ED+PT EEM+RK TKS+LI KH+KLI GW+K LK+QL KH+ ELERV
Sbjct: 86 LQREDRPTTEEMLRKDIATMEEELKTKSELIAKHKKLIEGWQKELKDQLG-KHVTELERV 144
>gb|KVI01417.1| hypothetical protein Ccrd_020306 [Cynara cardunculus var. scolymus]
Length = 83
Score = 59.3 bits (142), Expect = 4e-09
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ EDQPTKEE+++K TK+ LI K E+LI GWRK LK+QL KH AELERV
Sbjct: 25 LQREDQPTKEEILQKDIAMMEEEVKTKTDLIKKQERLIQGWRKELKDQLE-KHNAELERV 83
>ref|XP_009412106.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
[Musa acuminata subsp. malaccensis]
Length = 168
Score = 61.2 bits (147), Expect = 4e-09
Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 10/60 (16%)
Frame = -1
Query: 224 LQYEDQPTKEEMIRK----------TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
LQ ED+PTKEEM+RK TK++LI KH++LI GWRK LK QL KH+ ELE V
Sbjct: 110 LQREDEPTKEEMLRKEISVMEEELKTKTELIKKHQRLIDGWRKELKEQLE-KHVTELETV 168
>ref|XP_010259518.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
[Nelumbo nucifera]
ref|XP_019053554.1| PREDICTED: mediator of RNA polymerase II transcription subunit 28
[Nelumbo nucifera]
Length = 137
Score = 60.5 bits (145), Expect = 5e-09
Identities = 45/100 (45%), Positives = 51/100 (51%), Gaps = 28/100 (28%)
Frame = -1
Query: 290 ARRLQAYLHHPRAPLVVVDVER------------------LQYEDQPTKEEMIRK----- 180
AR LQA P P +DVER LQ EDQPTKEE +RK
Sbjct: 40 ARELQAIDRSPH-PSHQIDVERHARDFMEAAKKLQLYFIGLQNEDQPTKEETLRKEIAAM 98
Query: 179 -----TKSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
K++LI K E+LI GWRK LK QL KH+ ELERV
Sbjct: 99 EEEMRLKTELIKKQERLIEGWRKELKEQLD-KHVTELERV 137
>gb|PON55306.1| Mediator of RNA polymerase II transcription subunit [Trema
orientalis]
Length = 138
Score = 60.5 bits (145), Expect = 5e-09
Identities = 45/100 (45%), Positives = 52/100 (52%), Gaps = 28/100 (28%)
Frame = -1
Query: 290 ARRLQAYLHHPRAPLVVVDVER------------------LQYEDQPTKEEMIRKT---- 177
AR LQA P P +DVER LQ EDQP+K E +RK
Sbjct: 41 ARELQAIDRSPH-PSHQIDVERHARDFMEAAKKLQLYFIGLQREDQPSKAETLRKEIAVM 99
Query: 176 ------KSKLIDKHEKLILGWRKALKNQLPIKHIAELERV 75
K++LI KHEK I GWRK LK+QL KH+AELERV
Sbjct: 100 EEELKLKNELIKKHEKQIQGWRKELKDQLD-KHLAELERV 138