BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00021387
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]    67   1e-11
ref|WP_049931734.1| hypothetical protein [Lachnospiraceae bacter...    63   4e-09
ref|WP_013305975.1| ribonuclease H [Maribacter sp. HTCC2170] >gi...    62   4e-09
ref|XP_021318425.1| uncharacterized protein LOC110436243 isoform...    61   6e-09
ref|WP_078037939.1| hypothetical protein [Oribacterium sp. C9] >...    62   8e-09
ref|WP_076931307.1| ribonuclease H [Proteiniphilum saccharoferme...    61   1e-08
gb|OJV85859.1| ribonuclease H [Bacteroidia bacterium 44-10]            61   2e-08
ref|WP_026327153.1| ribonuclease H [Proteiniphilum acetatigenes]...    60   2e-08
ref|WP_072730325.1| ribonuclease H [Paenibacillus sp. NAIST15-1]       60   3e-08
ref|WP_031548559.1| hypothetical protein [Oribacterium sp. FC2011]     60   4e-08
ref|WP_091207767.1| hypothetical protein [Oribacterium sp. WCC10...    60   4e-08
emb|CAN71683.1| hypothetical protein VITISV_040973 [Vitis vinifera]    61   4e-08
dbj|GAV13916.1| ribonuclease H [Paenibacillus sp. NAIST15-1]           60   4e-08
ref|WP_028533502.1| MULTISPECIES: ribonuclease H [Paenibacillus]       60   5e-08
gb|EPY14172.1| ribonuclease H-like protein [Paenibacillus alvei ...    60   6e-08
dbj|GAK01363.1| LOW QUALITY PROTEIN: ribonuclease HI-related pro...    59   6e-08
ref|XP_007288914.1| ATP-dependent DNA helicase PIF1 [Marssonina ...    60   7e-08
gb|KZV34899.1| hypothetical protein F511_04873 [Dorcoceras hygro...    57   9e-08
ref|WP_044353267.1| ribonuclease H [Paenibacillus sp. E194] >gi|...    59   9e-08
gb|KZV57440.1| hypothetical protein F511_35001 [Dorcoceras hygro...    57   1e-07

>emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]
          Length = 118

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = -2

Query: 353 LRRRMGFTYVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEYSGVIQF 174
           LR      YVVF GR+ G+Y++WP+C  Q++GYK  VY  Y T+EEA +A+M Y   + F
Sbjct: 24  LRMANDVYYVVFAGRKKGIYNSWPECQEQVVGYKGNVYKLYKTFEEARRAWMFYEARVNF 83


>ref|WP_049931734.1| hypothetical protein [Lachnospiraceae bacterium JC7]
 gb|ETP73967.1| putative double-stranded RNA/RNA-DNA hybrid binding protein
           [Lachnospiraceae bacterium JC7]
          Length = 257

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = -2

Query: 341 MGFTYVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEYSG 186
           M F Y V  G++PGVYSNW DC AQ++GY  AVY K+ST  EAE AF   SG
Sbjct: 1   MAFFYAVQKGKKPGVYSNWNDCKAQVMGYPGAVYKKFSTRGEAE-AFAAASG 51


>ref|WP_013305975.1| ribonuclease H [Maribacter sp. HTCC2170]
 gb|EAR02927.1| ribonuclease H-related protein [Maribacter sp. HTCC2170]
          Length = 211

 Score = 62.4 bits (150), Expect = 4e-09
 Identities = 29/52 (55%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKA----FMEYSG 186
           YVV+ G+RPGVYS W DC A I GYK A Y  +ST++EA+KA    + EY G
Sbjct: 8   YVVWKGKRPGVYSTWEDCKAAITGYKGAQYKSFSTFDEAKKAYNSNYEEYKG 59


>ref|XP_021318425.1| uncharacterized protein LOC110436243 isoform X1 [Sorghum bicolor]
          Length = 165

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEYSG 186
           YVV+ G +PGVY++W DC+AQ+ G+KK  Y  + T EEA  +F+EY G
Sbjct: 59  YVVYKGYKPGVYADWADCNAQVAGFKKNCYQGFPTKEEAVASFLEYLG 106


>ref|WP_078037939.1| hypothetical protein [Oribacterium sp. C9]
 gb|OON85483.1| hypothetical protein BXO88_11815 [Oribacterium sp. C9]
          Length = 264

 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 31/52 (59%), Positives = 35/52 (67%)
 Frame = -2

Query: 341 MGFTYVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEYSG 186
           M F Y V  G+ PGVYSNW DC AQ+ G+  AVY K+ST EEAE AF   SG
Sbjct: 1   MAFYYAVQRGKNPGVYSNWNDCKAQVTGFSGAVYKKFSTLEEAE-AFAGASG 51


>ref|WP_076931307.1| ribonuclease H [Proteiniphilum saccharofermentans]
 emb|SDZ83709.1| ribonuclease HI [Porphyromonadaceae bacterium KH3R12]
 emb|SFS71710.1| ribonuclease HI [Porphyromonadaceae bacterium NLAE-zl-C104]
 emb|SCD21460.1| RNase H [Proteiniphilum saccharofermentans]
          Length = 216

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAF 201
           YVV+ G +PG+YS+W DC AQ+ G++ A+Y  +ST EEAEKAF
Sbjct: 7   YVVWKGIKPGIYSSWDDCKAQVSGFENALYKSFSTREEAEKAF 49


>gb|OJV85859.1| ribonuclease H [Bacteroidia bacterium 44-10]
          Length = 216

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFME 195
           YVV+ G +PG+YS+W DC AQ+ G++ A+Y  + T EEAEKAF E
Sbjct: 7   YVVWKGVKPGIYSSWDDCKAQVSGFEDALYKSFPTQEEAEKAFSE 51


>ref|WP_026327153.1| ribonuclease H [Proteiniphilum acetatigenes]
 emb|SFK29240.1| ribonuclease HI [Porphyromonadaceae bacterium KH3CP3RA]
          Length = 210

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAF 201
           YVV+ G +PG+Y++W DC AQ+ G++ A+Y  +ST EEAEKAF
Sbjct: 7   YVVWKGVKPGIYNSWDDCKAQVSGFENALYKSFSTLEEAEKAF 49


>ref|WP_072730325.1| ribonuclease H [Paenibacillus sp. NAIST15-1]
          Length = 215

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFME 195
           YVV+ G +PGVY++WP+C AQ+  YK A Y  Y++  EAEKA+ E
Sbjct: 7   YVVWEGNKPGVYTSWPECQAQVSNYKDAKYKSYTSQSEAEKAYRE 51


>ref|WP_031548559.1| hypothetical protein [Oribacterium sp. FC2011]
          Length = 256

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 28/52 (53%), Positives = 34/52 (65%)
 Frame = -2

Query: 341 MGFTYVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEYSG 186
           M F Y V  G++PGVYSNW DC AQ+ G+  AVY K+ST  EAE   +  SG
Sbjct: 1   MAFYYAVQKGKKPGVYSNWNDCKAQVTGFSGAVYKKFSTKAEAEAFAVADSG 52


>ref|WP_091207767.1| hypothetical protein [Oribacterium sp. WCC10]
 emb|SFG56325.1| ribonuclease HI [Oribacterium sp. WCC10]
          Length = 265

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 30/52 (57%), Positives = 35/52 (67%)
 Frame = -2

Query: 341 MGFTYVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEYSG 186
           M F Y V  G++PGVYSNW DC AQ+ G+  AVY K+ST  EAE AF   SG
Sbjct: 1   MAFYYAVQRGKKPGVYSNWNDCKAQVTGFSGAVYKKFSTRAEAE-AFAGASG 51


>emb|CAN71683.1| hypothetical protein VITISV_040973 [Vitis vinifera]
          Length = 375

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
 Frame = -2

Query: 398 ESRVLGFVISPECHS-----LRRRMGFTYVVFVGRRPGVYSNWPDCSAQILGYKKAVYMK 234
           +++ L + I P  H      LR      YVVF  R+ G+Y++WP+C  Q++GYK  VY  
Sbjct: 240 DTQSLRYGIGPLVHLSQNLLLRMANDVYYVVFAVRKSGIYNSWPECQEQVVGYKGNVYKS 299

Query: 233 YSTYEEAEKAFMEY 192
           Y T+EEA +A++ Y
Sbjct: 300 YKTFEEARRAWVFY 313


>dbj|GAV13916.1| ribonuclease H [Paenibacillus sp. NAIST15-1]
          Length = 241

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFME 195
           YVV+ G +PGVY++WP+C AQ+  YK A Y  Y++  EAEKA+ E
Sbjct: 33  YVVWEGNKPGVYTSWPECQAQVSNYKDAKYKSYTSQSEAEKAYRE 77


>ref|WP_028533502.1| MULTISPECIES: ribonuclease H [Paenibacillus]
          Length = 215

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFME 195
           YVV+ G +PGVY++WP+C AQ+  YK A Y  Y++  EAEKA+ E
Sbjct: 7   YVVWEGSKPGVYTSWPECQAQVSNYKDAKYKSYTSQSEAEKAYRE 51


>gb|EPY14172.1| ribonuclease H-like protein [Paenibacillus alvei A6-6i-x]
 emb|SDF26801.1| ribonuclease HI [Paenibacillus sp. cl6col]
          Length = 241

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFME 195
           YVV+ G +PGVY++WP+C AQ+  YK A Y  Y++  EAEKA+ E
Sbjct: 33  YVVWEGSKPGVYTSWPECQAQVSNYKDAKYKSYTSQSEAEKAYRE 77


>dbj|GAK01363.1| LOW QUALITY PROTEIN: ribonuclease HI-related protein 3
           [Geomicrobium sp. JCM 19055]
          Length = 213

 Score = 59.3 bits (142), Expect = 6e-08
 Identities = 23/50 (46%), Positives = 35/50 (70%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEYSGVI 180
           YVV+ GR+PG+Y+ W +C A++ G+K A +  Y TYEEA++AF     V+
Sbjct: 7   YVVWKGRKPGIYTTWAECEAEVKGFKGARFKSYPTYEEAKQAFQSGKSVV 56


>ref|XP_007288914.1| ATP-dependent DNA helicase PIF1 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
 gb|EKD20343.1| ATP-dependent DNA helicase PIF1 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 690

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 26/54 (48%), Positives = 36/54 (66%)
 Frame = -2

Query: 350 RRRMGFTYVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEYS 189
           R+     YVVF GR PG+Y  W +CSAQ+LG+ K   + Y  +EEAEKA+ E++
Sbjct: 3   RKNKKEAYVVFRGRIPGLYRTWDECSAQVLGFSKGYQLGYERFEEAEKAWAEHT 56


>gb|KZV34899.1| hypothetical protein F511_04873 [Dorcoceras hygrometricum]
          Length = 112

 Score = 57.0 bits (136), Expect = 9e-08
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
 Frame = -2

Query: 386 LGFVISPECHSLRRRMGF-------TYVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYS 228
           + +++ P C  + +   +        YVVFVGR PGVY  W D S Q+ G+  + Y  + 
Sbjct: 19  IAYILQPNCTGICKIDSYLTGLSPKAYVVFVGREPGVYERWSDASKQVSGFSGSCYKGFE 78

Query: 227 TYEEAEKAFMEYS 189
           T E+AE+AF  ++
Sbjct: 79  TKEDAEEAFRSFA 91


>ref|WP_044353267.1| ribonuclease H [Paenibacillus sp. E194]
 gb|KJB89552.1| ribonuclease H [Paenibacillus sp. E194]
          Length = 215

 Score = 58.9 bits (141), Expect = 9e-08
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFME 195
           YVV+ G +PG+Y++WP+C AQ+  YK A Y  Y++  EAEKA+ E
Sbjct: 7   YVVWEGSKPGIYTSWPECQAQVSNYKDAKYKSYTSKSEAEKAYRE 51


>gb|KZV57440.1| hypothetical protein F511_35001 [Dorcoceras hygrometricum]
          Length = 122

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = -2

Query: 329 YVVFVGRRPGVYSNWPDCSAQILGYKKAVYMKYSTYEEAEKAFMEY 192
           YVVF G R GVY  W +  AQ+ GYK A+Y K+ST  EA KAF EY
Sbjct: 5   YVVFKGERNGVYDTWAETHAQVDGYKGALYQKFSTKAEAIKAFEEY 50