BLASTX nr result

ID: Ophiopogon27_contig00021277 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00021277
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020249952.1| actin-related protein 2/3 complex subunit 2A...    45   6e-08
ref|XP_020098114.1| actin-related protein 2/3 complex subunit 2A...    43   7e-06

>ref|XP_020249952.1| actin-related protein 2/3 complex subunit 2A-like [Asparagus
           officinalis]
 gb|ONK55434.1| uncharacterized protein A4U43_UnF3400 [Asparagus officinalis]
          Length = 127

 Score = 45.1 bits (105), Expect(2) = 6e-08
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = +1

Query: 130 LQSSRLDSTAAQR*GIDLDCQSVEFDDVRYHIQ 228
           LQ+  L+ST     GIDLDCQ+VEFDDVRYHIQ
Sbjct: 15  LQNRVLNSTEK---GIDLDCQAVEFDDVRYHIQ 44



 Score = 39.7 bits (91), Expect(2) = 6e-08
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +3

Query: 3  MILLQSPSRFVLQTLENRVL 62
          MILLQSPSRFVLQTL+NRVL
Sbjct: 1  MILLQSPSRFVLQTLQNRVL 20


>ref|XP_020098114.1| actin-related protein 2/3 complex subunit 2A [Ananas comosus]
          Length = 320

 Score = 43.1 bits (100), Expect(2) = 7e-06
 Identities = 17/23 (73%), Positives = 21/23 (91%)
 Frame = +1

Query: 172 GIDLDCQSVEFDDVRYHIQCISR 240
           G+D+DCQ+VEFDDVRYHIQ  +R
Sbjct: 25  GVDIDCQTVEFDDVRYHIQFSTR 47



 Score = 34.3 bits (77), Expect(2) = 7e-06
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +3

Query: 3  MILLQSPSRFVLQTLENRVL 62
          MILLQSPSRF+LQ L++RVL
Sbjct: 1  MILLQSPSRFLLQILQDRVL 20


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