BLASTX nr result

ID: Ophiopogon27_contig00021168 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00021168
         (369 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018681063.1| PREDICTED: splicing factor U2af large subuni...    54   8e-06

>ref|XP_018681063.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 613

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +1

Query: 1   MPGVTLPDNVGQLVPLCCQWA*APTSVALMSKEESMPRFDGSCSSSAGN 147
           +PG T   NVG LVPLCCQ   A  S+A M K+E   +FDGSCSSS G+
Sbjct: 188 LPGATATGNVGPLVPLCCQRVRA-DSLAFMCKKEPTHQFDGSCSSSIGS 235


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