BLASTX nr result

ID: Ophiopogon27_contig00020976 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00020976
         (671 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008790339.1| PREDICTED: nuclear pore complex protein NUP1...    65   1e-08
ref|XP_008790331.1| PREDICTED: nuclear pore complex protein NUP1...    65   1e-08
ref|XP_010917934.1| PREDICTED: nuclear pore complex protein NUP1...    63   8e-08
ref|XP_019704859.1| PREDICTED: nuclear pore complex protein NUP1...    63   8e-08
ref|XP_019704858.1| PREDICTED: nuclear pore complex protein NUP1...    63   8e-08
ref|XP_008813663.1| PREDICTED: nuclear pore complex protein NUP1...    62   2e-07
ref|XP_008813664.1| PREDICTED: nuclear pore complex protein NUP1...    60   1e-06
ref|XP_017702409.1| PREDICTED: nuclear pore complex protein NUP1...    59   2e-06
ref|XP_008813662.1| PREDICTED: nuclear pore complex protein NUP1...    59   2e-06
ref|XP_017702408.1| PREDICTED: nuclear pore complex protein NUP1...    59   2e-06
ref|XP_008813661.1| PREDICTED: nuclear pore complex protein NUP1...    59   2e-06

>ref|XP_008790339.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X2 [Phoenix
            dactylifera]
          Length = 1229

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPT-ASLEPNFASTPSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT +S  P F++ PSFQFGSG+S     SV PS+ K D+  ++ K ++A PF +SS
Sbjct: 858  SSGSPTVSSATPVFSTVPSFQFGSGASTSASTSVAPSLEKPDSNGLEDKPVKALPFGLSS 917

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
              AP  S A+S T                   SAASATSSV
Sbjct: 918  FIAPGSSAAHSITG----------------SNSAASATSSV 942


>ref|XP_008790331.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X1 [Phoenix
            dactylifera]
          Length = 1231

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPT-ASLEPNFASTPSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT +S  P F++ PSFQFGSG+S     SV PS+ K D+  ++ K ++A PF +SS
Sbjct: 860  SSGSPTVSSATPVFSTVPSFQFGSGASTSASTSVAPSLEKPDSNGLEDKPVKALPFGLSS 919

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
              AP  S A+S T                   SAASATSSV
Sbjct: 920  FIAPGSSAAHSITG----------------SNSAASATSSV 944


>ref|XP_010917934.1| PREDICTED: nuclear pore complex protein NUP1 isoform X3 [Elaeis
            guineensis]
          Length = 1353

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPT-ASLEPNFASTPSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT +S  P  ++ PSFQFGSG+S G    V PS+ K D+  ++ KS++ASPF ISS
Sbjct: 863  SSGSPTISSATPVSSTVPSFQFGSGASSGASTMVTPSLDKPDSNGLEEKSVKASPFGISS 922

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
              A   + A+S+T                 + S  SATSSV
Sbjct: 923  FVASGSTVAHSSTG----------------NNSCVSATSSV 947


>ref|XP_019704859.1| PREDICTED: nuclear pore complex protein NUP1 isoform X2 [Elaeis
            guineensis]
          Length = 1354

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPT-ASLEPNFASTPSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT +S  P  ++ PSFQFGSG+S G    V PS+ K D+  ++ KS++ASPF ISS
Sbjct: 864  SSGSPTISSATPVSSTVPSFQFGSGASSGASTMVTPSLDKPDSNGLEEKSVKASPFGISS 923

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
              A   + A+S+T                 + S  SATSSV
Sbjct: 924  FVASGSTVAHSSTG----------------NNSCVSATSSV 948


>ref|XP_019704858.1| PREDICTED: nuclear pore complex protein NUP1 isoform X1 [Elaeis
            guineensis]
          Length = 1355

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPT-ASLEPNFASTPSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT +S  P  ++ PSFQFGSG+S G    V PS+ K D+  ++ KS++ASPF ISS
Sbjct: 865  SSGSPTISSATPVSSTVPSFQFGSGASSGASTMVTPSLDKPDSNGLEEKSVKASPFGISS 924

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
              A   + A+S+T                 + S  SATSSV
Sbjct: 925  FVASGSTVAHSSTG----------------NNSCVSATSSV 949


>ref|XP_008813663.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X5 [Phoenix
            dactylifera]
          Length = 1299

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 60/201 (29%), Positives = 83/201 (41%), Gaps = 7/201 (3%)
 Frame = +3

Query: 3    SSSSPTASLEPNFAST-PSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT S      ST P+FQFGSG+SIG  ISV PS  + D+  ++ KS++AS F ISS
Sbjct: 862  SSGSPTISSAVTVCSTMPTFQFGSGASIGASISVTPSPNQPDSKVLEGKSVKASSFGISS 921

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSVXXXXXXXXXXXXXXXXXXX 359
            S     + A+S T                   ++ASATSSV                   
Sbjct: 922  SITLDSAVAFSRTG----------------SNNSASATSSVFSSMGTSSSSVVQESPLFS 965

Query: 360  XXXGIXXXXXXXXXXXXXXXXXXXXXXXXNGTSCFPHSSAASAVQ------CGSFSSGPS 521
                                         +G++C    SA  A +        SFS+  S
Sbjct: 966  STGSGSMALSTSSVSTDNGFFATTASAHSSGSTCSLFGSATPATRSFATSSIFSFSTSGS 1025

Query: 522  FELNASSLLTSSISPFGSAMG 584
               +ASS+  +S +PFG++ G
Sbjct: 1026 SSSSASSVSFASTAPFGTSSG 1046


>ref|XP_008813664.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X6 [Phoenix
            dactylifera]
          Length = 1266

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 59/201 (29%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
 Frame = +3

Query: 3    SSSSPTASLEPNFAST-PSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT S      ST P+FQFGSG+SIG  ISV PS  + D+  ++ KS++AS F ISS
Sbjct: 862  SSGSPTISSAVTVCSTMPTFQFGSGASIGASISVTPSPNQPDSKVLEGKSVKASSFGISS 921

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSVXXXXXXXXXXXXXXXXXXX 359
            S     + A+S T                   ++ASATSSV                   
Sbjct: 922  SITLDSAVAFSRTG----------------SNNSASATSSVFSSMGTSSSSVVQESPLFS 965

Query: 360  XXXGIXXXXXXXXXXXXXXXXXXXXXXXXNGTSCFPHSSAASAVQ------CGSFSSGPS 521
                                         +G++C    SA  A +        SFS+  S
Sbjct: 966  STGSGSMALSTSSVSTDNGFFATTASAHSSGSTCSLFGSATPATRSFATSSIFSFSTSGS 1025

Query: 522  FELNASSLLTSSISPFGSAMG 584
               +ASS+  +S +PF ++ G
Sbjct: 1026 SSSSASSVSFASTAPFATSFG 1046


>ref|XP_017702409.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X4 [Phoenix
            dactylifera]
          Length = 1323

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPTASLEPNFAST-PSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT S      ST P+FQFGSG+SIG  ISV PS  + D+  ++ KS++AS F ISS
Sbjct: 822  SSGSPTISSAVTVCSTMPTFQFGSGASIGASISVTPSPNQPDSKVLEGKSVKASSFGISS 881

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
            S     + A+S T                   ++ASATSSV
Sbjct: 882  SITLDSAVAFSRTG----------------SNNSASATSSV 906


>ref|XP_008813662.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X3 [Phoenix
            dactylifera]
          Length = 1330

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPTASLEPNFAST-PSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT S      ST P+FQFGSG+SIG  ISV PS  + D+  ++ KS++AS F ISS
Sbjct: 862  SSGSPTISSAVTVCSTMPTFQFGSGASIGASISVTPSPNQPDSKVLEGKSVKASSFGISS 921

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
            S     + A+S T                   ++ASATSSV
Sbjct: 922  SITLDSAVAFSRTG----------------SNNSASATSSV 946


>ref|XP_017702408.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X2 [Phoenix
            dactylifera]
          Length = 1359

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPTASLEPNFAST-PSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT S      ST P+FQFGSG+SIG  ISV PS  + D+  ++ KS++AS F ISS
Sbjct: 858  SSGSPTISSAVTVCSTMPTFQFGSGASIGASISVTPSPNQPDSKVLEGKSVKASSFGISS 917

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
            S     + A+S T                   ++ASATSSV
Sbjct: 918  SITLDSAVAFSRTG----------------SNNSASATSSV 942


>ref|XP_008813661.1| PREDICTED: nuclear pore complex protein NUP1-like isoform X1 [Phoenix
            dactylifera]
          Length = 1363

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    SSSSPTASLEPNFAST-PSFQFGSGSSIGTPISVLPSMGKFDAGDMDRKSIEASPFTISS 179
            SS SPT S      ST P+FQFGSG+SIG  ISV PS  + D+  ++ KS++AS F ISS
Sbjct: 862  SSGSPTISSAVTVCSTMPTFQFGSGASIGASISVTPSPNQPDSKVLEGKSVKASSFGISS 921

Query: 180  SKAPAISNAYSNTDMXXXXXXXXXXXXXXCDGSAASATSSV 302
            S     + A+S T                   ++ASATSSV
Sbjct: 922  SITLDSAVAFSRTG----------------SNNSASATSSV 946


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