BLASTX nr result

ID: Ophiopogon27_contig00020886 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00020886
         (526 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260622.1| protein ROS1-like isoform X2 [Asparagus offi...   117   2e-27
ref|XP_020260621.1| protein ROS1-like isoform X1 [Asparagus offi...   117   2e-27
ref|XP_020259770.1| protein ROS1-like [Asparagus officinalis] >g...   107   8e-24
ref|XP_020247935.1| transcriptional activator DEMETER-like [Aspa...    83   4e-15

>ref|XP_020260622.1| protein ROS1-like isoform X2 [Asparagus officinalis]
          Length = 1721

 Score =  117 bits (294), Expect = 2e-27
 Identities = 67/146 (45%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435 ENVRIPQTPNQPPRPSRLDLLKAKWQANFESMVKN-GKQSQQSVRREGENLKKIARMMSC 259
           EN+R+PQTPNQPP+PSRL+++K KWQA++E MV +    SQQ  RREGENLKK+ARMM+C
Sbjct: 425 ENLRVPQTPNQPPQPSRLEMMKMKWQADYEKMVNDMNSSSQQPARREGENLKKLARMMNC 484

Query: 258 QNIPGNHGRHLQDGQNPAASNSISDAQREMRNYNLVDNAQVAVNTTSIVRPGNGTGKVSG 79
           +NI GN  R+    Q P ASN  SD   ++ N +                  N   + +G
Sbjct: 485 RNIQGNEVRNSHVAQVPVASNGSSDLLLQVGNGDY-----------------NRISRTNG 527

Query: 78  NYNAISTDPCFPDFRKRRRVESGQQE 1
           N N   TD       KRRRVE+ Q E
Sbjct: 528 NCNVNYTDT-----HKRRRVENDQNE 548


>ref|XP_020260621.1| protein ROS1-like isoform X1 [Asparagus officinalis]
 gb|ONK71531.1| uncharacterized protein A4U43_C04F9600 [Asparagus officinalis]
          Length = 1722

 Score =  117 bits (294), Expect = 2e-27
 Identities = 67/146 (45%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435 ENVRIPQTPNQPPRPSRLDLLKAKWQANFESMVKN-GKQSQQSVRREGENLKKIARMMSC 259
           EN+R+PQTPNQPP+PSRL+++K KWQA++E MV +    SQQ  RREGENLKK+ARMM+C
Sbjct: 425 ENLRVPQTPNQPPQPSRLEMMKMKWQADYEKMVNDMNSSSQQPARREGENLKKLARMMNC 484

Query: 258 QNIPGNHGRHLQDGQNPAASNSISDAQREMRNYNLVDNAQVAVNTTSIVRPGNGTGKVSG 79
           +NI GN  R+    Q P ASN  SD   ++ N +                  N   + +G
Sbjct: 485 RNIQGNEVRNSHVAQVPVASNGSSDLLLQVGNGDY-----------------NRISRTNG 527

Query: 78  NYNAISTDPCFPDFRKRRRVESGQQE 1
           N N   TD       KRRRVE+ Q E
Sbjct: 528 NCNVNYTDT-----HKRRRVENDQNE 548


>ref|XP_020259770.1| protein ROS1-like [Asparagus officinalis]
 gb|ONK70704.1| uncharacterized protein A4U43_C04F660 [Asparagus officinalis]
          Length = 1654

 Score =  107 bits (268), Expect = 8e-24
 Identities = 65/145 (44%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
 Frame = -2

Query: 432 NVRIPQTPNQPPRPSRLDLLKAKWQANFESMV-KNGKQSQQSVRREGENLKKIARMMSCQ 256
           N+R PQTP+QPPRPSR ++L+ KWQA+F  MV K     QQ +RREGENLKK+ARM++C+
Sbjct: 303 NLRAPQTPSQPPRPSRQEMLRMKWQADFGRMVEKMNSSQQQPIRREGENLKKLARMINCR 362

Query: 255 NIPGNHGRHLQDGQNPAASNSISDAQREMRNYNLVDNAQVAVNTTSIVRPGNGTGKVSGN 76
           N   N  RH     +P   NS    Q    NY                   NG  + +GN
Sbjct: 363 N---NQERH-----HPQDRNSEVLFQVGNGNY-------------------NGINRGNGN 395

Query: 75  YNAISTDPCFPDFRKRRRVESGQQE 1
            +   T+PC PD  KRRRVE+G QE
Sbjct: 396 CSVNCTNPCPPDIHKRRRVENGHQE 420


>ref|XP_020247935.1| transcriptional activator DEMETER-like [Asparagus officinalis]
 ref|XP_020247936.1| transcriptional activator DEMETER-like [Asparagus officinalis]
 ref|XP_020247937.1| transcriptional activator DEMETER-like [Asparagus officinalis]
 gb|ONK56964.1| uncharacterized protein A4U43_C10F15150 [Asparagus officinalis]
          Length = 1741

 Score = 82.8 bits (203), Expect = 4e-15
 Identities = 60/149 (40%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
 Frame = -2

Query: 447 RREGENVRIPQTPNQPPRPSRLDLLKAKWQANFESMVKNGKQSQQSVRREGENLKKIARM 268
           R   EN+R PQ  NQ    SR ++LK KWQ +FE M  N   +QQS RREG N ++    
Sbjct: 395 RFTNENLRTPQILNQALESSRQEMLKLKWQVDFERMRSNMNSNQQSARREG-NWER---- 449

Query: 267 MSCQNIPGNHG-RHLQDGQNPAASNSISDAQREMRNYNLVDNAQVAVNTTSIVRPGNGTG 91
                  G  G RH QDGQN  ASN+ S +       N+V   QV  N  S+ +   G+ 
Sbjct: 450 ------HGQDGQRHGQDGQNQVASNTNSMS-------NIVHKVQVGAN-MSLTQENYGS- 494

Query: 90  KVSGNYNAISTDPCFPDFRKRRRVESGQQ 4
                    S DPCF D  KRR+VE+GQ+
Sbjct: 495 ---------SIDPCFRDIHKRRKVENGQR 514


Top