BLASTX nr result

ID: Ophiopogon27_contig00020839 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00020839
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244285.1| protein TIC 20-I, chloroplastic-like [Aspara...   122   1e-31
gb|ONK61242.1| uncharacterized protein A4U43_C08F27680 [Asparagu...    73   9e-13
ref|XP_020242131.1| protein TIC 20-I, chloroplastic-like [Aspara...    69   2e-11
ref|XP_017621250.1| PREDICTED: protein TIC 20-I, chloroplastic-l...    53   2e-06
gb|KHG03480.1| Protein TIC 20-I, chloroplastic -like protein [Go...    53   1e-05

>ref|XP_020244285.1| protein TIC 20-I, chloroplastic-like [Asparagus officinalis]
 gb|ONK61243.1| uncharacterized protein A4U43_C08F27690 [Asparagus officinalis]
          Length = 297

 Score =  122 bits (307), Expect = 1e-31
 Identities = 68/132 (51%), Positives = 87/132 (65%), Gaps = 9/132 (6%)
 Frame = +2

Query: 2   AYGMKLKRTMATPERIFMTPRYGKTKCNASFVCSRRKSINVAALSGRNQFGFSLAVHQLS 181
           +YG KLKR+M TP+R+ M   +GK + + S VCS RK I+ A+LS R  FG S AVH+ S
Sbjct: 25  SYGTKLKRSMVTPKRVSMAT-WGKVRSSGSLVCSHRKPISAASLSYRGHFGTSPAVHRHS 83

Query: 182 V--KDTGLPSSL------LP-EDCANRPSMTPALPRHRSMRTLVSKASNGMPYPFHCPST 334
               DTG  SSL      LP +D  N       LPRH+S RT++S+ASN +PYPF  PST
Sbjct: 84  AIAADTGFSSSLFLAAAALPSKDYLNHQITYLTLPRHKSTRTVISRASNSLPYPFTYPST 143

Query: 335 EEKKPRWWWRTL 370
           +E+KPRW+WRTL
Sbjct: 144 DEEKPRWYWRTL 155


>gb|ONK61242.1| uncharacterized protein A4U43_C08F27680 [Asparagus officinalis]
          Length = 314

 Score = 73.2 bits (178), Expect = 9e-13
 Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
 Frame = +2

Query: 2   AYGMKLKRTMATPERIFMTPRYGKTKCNASFVCSRRKSINVAALSGRNQFGFSLAVHQLS 181
           AY M L   MAT  R+ M P+  +  CN+SF    R++   A L+ +N     L + + S
Sbjct: 32  AYDMNLNGCMATSGRMAMQPKPYRATCNSSFTYFYRRTAPTALLNAKNFCETQLELARTS 91

Query: 182 VKDTG--------LPSSLLPEDCANRPSMTPALPRHRS------MRTLVSKASNGMPYPF 319
           +K +G          +SLL  D  +  SM P L R  +        T+V +AS  +PY F
Sbjct: 92  LKGSGPFTCHLSSASTSLLRGDHGSFTSMIPILYRSHTTGSKNRSTTIVPRASKDVPYSF 151

Query: 320 HCPSTEEKKPRWWWRTL 370
             P+   KKPRWWWRTL
Sbjct: 152 RYPAM-TKKPRWWWRTL 167


>ref|XP_020242131.1| protein TIC 20-I, chloroplastic-like [Asparagus officinalis]
          Length = 280

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
 Frame = +2

Query: 11  MKLKRTMATPERIFMTPRYGKTKCNASFVCSRRKSINVAALSGRNQFGFSLAVHQLSVKD 190
           M L   MAT  R+ M P+  +  CN+SF    R++   A L+ +N     L + + S+K 
Sbjct: 1   MNLNGCMATSGRMAMQPKPYRATCNSSFTYFYRRTAPTALLNAKNFCETQLELARTSLKG 60

Query: 191 TG--------LPSSLLPEDCANRPSMTPALPRHRS------MRTLVSKASNGMPYPFHCP 328
           +G          +SLL  D  +  SM P L R  +        T+V +AS  +PY F  P
Sbjct: 61  SGPFTCHLSSASTSLLRGDHGSFTSMIPILYRSHTTGSKNRSTTIVPRASKDVPYSFRYP 120

Query: 329 STEEKKPRWWWRTL 370
           +   KKPRWWWRTL
Sbjct: 121 AM-TKKPRWWWRTL 133


>ref|XP_017621250.1| PREDICTED: protein TIC 20-I, chloroplastic-like isoform X2
           [Gossypium arboreum]
          Length = 127

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 35/97 (36%), Positives = 45/97 (46%)
 Frame = +2

Query: 80  CNASFVCSRRKSINVAALSGRNQFGFSLAVHQLSVKDTGLPSSLLPEDCANRPSMTPALP 259
           C++SF CS    +   AL   +     +   +LS       S LL  D        P+LP
Sbjct: 25  CSSSFACSHH--LTTTALFRSSSESGDVPFLRLSAAS----SPLLSGDLGGLSQALPSLP 78

Query: 260 RHRSMRTLVSKASNGMPYPFHCPSTEEKKPRWWWRTL 370
           R R    LV +AS  +PY F  P    KKP+WWWRTL
Sbjct: 79  RRRGSN-LVPRASKDVPYSFRFPPMT-KKPKWWWRTL 113


>gb|KHG03480.1| Protein TIC 20-I, chloroplastic -like protein [Gossypium arboreum]
          Length = 235

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 35/97 (36%), Positives = 45/97 (46%)
 Frame = +2

Query: 80  CNASFVCSRRKSINVAALSGRNQFGFSLAVHQLSVKDTGLPSSLLPEDCANRPSMTPALP 259
           C++SF CS    +   AL   +     +   +LS       S LL  D        P+LP
Sbjct: 25  CSSSFACSHH--LTTTALFRSSSESGDVPFLRLSAAS----SPLLSGDLGGLSQALPSLP 78

Query: 260 RHRSMRTLVSKASNGMPYPFHCPSTEEKKPRWWWRTL 370
           R R    LV +AS  +PY F  P    KKP+WWWRTL
Sbjct: 79  RRRGSN-LVPRASKDVPYSFRFPPMT-KKPKWWWRTL 113


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