BLASTX nr result
ID: Ophiopogon27_contig00020828
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00020828
(1493 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94498.1| RNA polymerase beta (chloroplast) [Ophiopogon jap... 805 0.0
ref|YP_009432294.1| RNA polymerase beta (chloroplast) [Polygonat... 802 0.0
gb|AEX94497.1| RNA polymerase beta (chloroplast) [Liriope spicata] 801 0.0
ref|YP_009183190.1| RNA polymerase beta (chloroplast) [Polygonat... 800 0.0
ref|YP_009180099.1| RNA polymerase beta (chloroplast) [Polygonat... 800 0.0
gb|AEX94499.1| RNA polymerase beta (chloroplast) [Ruscus aculeatus] 799 0.0
gb|AEX94478.1| RNA polymerase beta (chloroplast) [Asparagus aspa... 798 0.0
emb|CUS18707.1| RNA polymerase beta (plastid) [Asparagus officin... 796 0.0
ref|YP_009370012.1| RNA polymerase beta (chloroplast) [Asparagus... 796 0.0
ref|YP_009431123.1| RNA polymerase beta (chloroplast) [Asparagus... 796 0.0
ref|YP_009431209.1| RNA polymerase beta (chloroplast) [Maianthem... 796 0.0
ref|YP_009335324.1| RNA polymerase beta (chloroplast) [Nolina at... 796 0.0
gb|AEX94495.1| RNA polymerase beta (chloroplast) [Dasylirion whe... 796 0.0
gb|AEX94494.1| RNA polymerase beta (chloroplast) [Beaucarnea hoo... 796 0.0
emb|CUS18626.1| RNA polymerase beta (plastid) [Asparagus officin... 795 0.0
ref|YP_009432548.1| RNA polymerase beta (chloroplast) [Cordyline... 794 0.0
ref|YP_009334481.1| RNA polymerase beta (chloroplast) [Anemarrhe... 793 0.0
gb|AEX94462.1| RNA polymerase beta (chloroplast) [Anemarrhena as... 793 0.0
gb|AEX94500.1| RNA polymerase beta (chloroplast) [Sansevieria tr... 793 0.0
ref|YP_009045557.1| RNA polymerase beta subunit (chloroplast) [C... 792 0.0
>gb|AEX94498.1| RNA polymerase beta (chloroplast) [Ophiopogon japonicus]
Length = 685
Score = 805 bits (2078), Expect = 0.0
Identities = 396/398 (99%), Positives = 397/398 (99%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEP+VWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPVVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKKVDNNNYKYTKEKEPYFC
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDNNNYKYTKEKEPYFC 587
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 588 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 647
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 648 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685
>ref|YP_009432294.1| RNA polymerase beta (chloroplast) [Polygonatum stenophyllum]
gb|ATB18549.1| RNA polymerase beta (chloroplast) [Polygonatum stenophyllum]
Length = 685
Score = 802 bits (2071), Expect = 0.0
Identities = 396/398 (99%), Positives = 396/398 (99%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGH VLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHSVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKKVDNNNYKYTKEKEPYFC
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDNNNYKYTKEKEPYFC 587
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 588 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 647
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 648 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685
>gb|AEX94497.1| RNA polymerase beta (chloroplast) [Liriope spicata]
Length = 685
Score = 801 bits (2070), Expect = 0.0
Identities = 395/398 (99%), Positives = 396/398 (99%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKKVDNNNYKYTKEKEPYFC
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDNNNYKYTKEKEPYFC 587
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIE QYESLGTYHEIYGHYLIVGS
Sbjct: 588 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEFQYESLGTYHEIYGHYLIVGS 647
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKK+IRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 648 VKKKIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685
>ref|YP_009183190.1| RNA polymerase beta (chloroplast) [Polygonatum verticillatum]
ref|YP_009236351.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Polygonatum
sibiricum]
gb|ALM87709.1| RNA polymerase beta (chloroplast) [Polygonatum verticillatum]
gb|AMF84065.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Polygonatum
sibiricum]
Length = 686
Score = 800 bits (2067), Expect = 0.0
Identities = 395/398 (99%), Positives = 396/398 (99%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 289 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 348
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 349 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 408
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGH VLLNRAPTLHRLGIQ
Sbjct: 409 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHSVLLNRAPTLHRLGIQ 468
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 469 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 528
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQN+KVDNNNYKYTKEKEPYFC
Sbjct: 529 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNEKVDNNNYKYTKEKEPYFC 588
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 589 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 648
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 649 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 686
>ref|YP_009180099.1| RNA polymerase beta (chloroplast) [Polygonatum cyrtonema]
gb|ALL96467.1| RNA polymerase beta (chloroplast) [Polygonatum cyrtonema]
Length = 686
Score = 800 bits (2067), Expect = 0.0
Identities = 395/398 (99%), Positives = 396/398 (99%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 289 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 348
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 349 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 408
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGH VLLNRAPTLHRLGIQ
Sbjct: 409 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHSVLLNRAPTLHRLGIQ 468
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 469 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 528
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNR+GICANRYN YNCGNYQNKKVDNNNYKYTKEKEPYFC
Sbjct: 529 GDPISVPTQDMLIGLYVLTIGNRQGICANRYNPYNCGNYQNKKVDNNNYKYTKEKEPYFC 588
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 589 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 648
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 649 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 686
>gb|AEX94499.1| RNA polymerase beta (chloroplast) [Ruscus aculeatus]
Length = 685
Score = 799 bits (2064), Expect = 0.0
Identities = 393/398 (98%), Positives = 397/398 (99%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGN+RGICANRYN YNCGN+QNKKVDNNNYKYTKEKEPYFC
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNQRGICANRYNPYNCGNHQNKKVDNNNYKYTKEKEPYFC 587
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRI+LDSPFWLRWRLDHR+IGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 588 SSYDALGAYRQKRIHLDSPFWLRWRLDHRIIGSREVPIEVQYESLGTYHEIYGHYLIVGS 647
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 648 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685
>gb|AEX94478.1| RNA polymerase beta (chloroplast) [Asparagus asparagoides]
Length = 689
Score = 798 bits (2061), Expect = 0.0
Identities = 395/400 (98%), Positives = 397/400 (99%), Gaps = 2/400 (0%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 290 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 349
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 350 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 409
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 410 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 469
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 470 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 529
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKK--VDNNNYKYTKEKEPY 895
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKK VDNNNYKYTKEKEPY
Sbjct: 530 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDVDNNNYKYTKEKEPY 589
Query: 896 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIV 1075
FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+EVQYESLGTYHEIYGHYLIV
Sbjct: 590 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPVEVQYESLGTYHEIYGHYLIV 649
Query: 1076 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSY+I
Sbjct: 650 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYSI 689
>emb|CUS18707.1| RNA polymerase beta (plastid) [Asparagus officinalis]
Length = 665
Score = 796 bits (2057), Expect = 0.0
Identities = 394/400 (98%), Positives = 397/400 (99%), Gaps = 2/400 (0%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 266 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 325
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 326 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 385
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 386 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 445
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 446 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 505
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKK--VDNNNYKYTKEKEPY 895
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKK VDNNNYKYTKEKEPY
Sbjct: 506 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDVDNNNYKYTKEKEPY 565
Query: 896 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIV 1075
FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+EVQYESLGTYHEIYGHYLIV
Sbjct: 566 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPVEVQYESLGTYHEIYGHYLIV 625
Query: 1076 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFC+AYSY+I
Sbjct: 626 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCQAYSYSI 665
>ref|YP_009370012.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
gb|ARO91418.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
Length = 686
Score = 796 bits (2057), Expect = 0.0
Identities = 394/400 (98%), Positives = 397/400 (99%), Gaps = 2/400 (0%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 287 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 346
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 347 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 406
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 407 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 466
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 467 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 526
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKK--VDNNNYKYTKEKEPY 895
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKK VDNNNYKYTKEKEPY
Sbjct: 527 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDVDNNNYKYTKEKEPY 586
Query: 896 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIV 1075
FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+EVQYESLGTYHEIYGHYLIV
Sbjct: 587 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPVEVQYESLGTYHEIYGHYLIV 646
Query: 1076 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFC+AYSY+I
Sbjct: 647 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCQAYSYSI 686
>ref|YP_009431123.1| RNA polymerase beta (chloroplast) [Asparagus schoberioides]
gb|AEX94477.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
gb|ASW26559.1| RNA polymerase beta (chloroplast) [Asparagus schoberioides]
Length = 689
Score = 796 bits (2057), Expect = 0.0
Identities = 394/400 (98%), Positives = 397/400 (99%), Gaps = 2/400 (0%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 290 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 349
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 350 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 409
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 410 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 469
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 470 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 529
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKK--VDNNNYKYTKEKEPY 895
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKK VDNNNYKYTKEKEPY
Sbjct: 530 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDVDNNNYKYTKEKEPY 589
Query: 896 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIV 1075
FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+EVQYESLGTYHEIYGHYLIV
Sbjct: 590 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPVEVQYESLGTYHEIYGHYLIV 649
Query: 1076 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFC+AYSY+I
Sbjct: 650 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCQAYSYSI 689
>ref|YP_009431209.1| RNA polymerase beta (chloroplast) [Maianthemum bicolor]
gb|ASW26645.1| RNA polymerase beta (chloroplast) [Maianthemum bicolor]
Length = 687
Score = 796 bits (2056), Expect = 0.0
Identities = 395/400 (98%), Positives = 396/400 (99%), Gaps = 2/400 (0%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLY--NCGNYQNKKVDNNNYKYTKEKEPY 895
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN Y NCGNYQNKKV+ NNYKYTKEKEPY
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNSNCGNYQNKKVEKNNYKYTKEKEPY 587
Query: 896 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIV 1075
FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIV
Sbjct: 588 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIV 647
Query: 1076 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 648 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 687
>ref|YP_009335324.1| RNA polymerase beta (chloroplast) [Nolina atopocarpa]
gb|APO12382.1| RNA polymerase beta (chloroplast) [Nolina atopocarpa]
Length = 682
Score = 796 bits (2055), Expect = 0.0
Identities = 393/398 (98%), Positives = 394/398 (98%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 285 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 344
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 404
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 405 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 464
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 465 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 524
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNY KKVDNNNYKYTKEKEPYFC
Sbjct: 525 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYPKKKVDNNNYKYTKEKEPYFC 584
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINL SPFWLRW+LDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 585 SSYDALGAYRQKRINLASPFWLRWQLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 644
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 645 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 682
>gb|AEX94495.1| RNA polymerase beta (chloroplast) [Dasylirion wheeleri]
Length = 685
Score = 796 bits (2055), Expect = 0.0
Identities = 394/398 (98%), Positives = 394/398 (98%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ KKVDNNNYKYTKEKEPYFC
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQKKKVDNNNYKYTKEKEPYFC 587
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINL SPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 588 SSYDALGAYRQKRINLASPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 647
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIR IYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 648 VKKEIRSIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685
>gb|AEX94494.1| RNA polymerase beta (chloroplast) [Beaucarnea hookeri]
Length = 685
Score = 796 bits (2055), Expect = 0.0
Identities = 394/398 (98%), Positives = 394/398 (98%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ KKVDNNNYKYTKEKEPYFC
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQKKKVDNNNYKYTKEKEPYFC 587
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINL SPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 588 SSYDALGAYRQKRINLASPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 647
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIR IYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 648 VKKEIRSIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685
>emb|CUS18626.1| RNA polymerase beta (plastid) [Asparagus officinalis]
Length = 689
Score = 795 bits (2053), Expect = 0.0
Identities = 393/400 (98%), Positives = 397/400 (99%), Gaps = 2/400 (0%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 290 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 349
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 350 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 409
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 410 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 469
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 470 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 529
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKK--VDNNNYKYTKEKEPY 895
GDPISVP+QDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKK VDNNNYKYTKEKEPY
Sbjct: 530 GDPISVPSQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDVDNNNYKYTKEKEPY 589
Query: 896 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIV 1075
FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+EVQYESLGTYHEIYGHYLIV
Sbjct: 590 FCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPVEVQYESLGTYHEIYGHYLIV 649
Query: 1076 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFC+AYSY+I
Sbjct: 650 GSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCQAYSYSI 689
>ref|YP_009432548.1| RNA polymerase beta (chloroplast) [Cordyline indivisa]
gb|AEX94492.1| RNA polymerase beta (chloroplast) [Cordyline australis]
gb|ATB18831.1| RNA polymerase beta (chloroplast) [Cordyline indivisa]
Length = 685
Score = 794 bits (2051), Expect = 0.0
Identities = 389/398 (97%), Positives = 393/398 (98%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQ IASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQQIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKKVDNNNYKYTKEKEPYFC
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDNNNYKYTKEKEPYFC 587
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLDHRV+GSREVPIEVQYESLGTYHEIYGHYLI GS
Sbjct: 588 SSYDALGAYRQKRINLDSPFWLRWRLDHRVVGSREVPIEVQYESLGTYHEIYGHYLIAGS 647
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEI CIYIRTTVGHVSFYREIEEA+QGFCRAY+Y I
Sbjct: 648 VKKEIHCIYIRTTVGHVSFYREIEEAVQGFCRAYAYAI 685
>ref|YP_009334481.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
gb|APO11291.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
Length = 682
Score = 793 bits (2048), Expect = 0.0
Identities = 391/398 (98%), Positives = 393/398 (98%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 285 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 344
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 404
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 405 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 464
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 465 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 524
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNK VDNNNYKYTKEKEPYFC
Sbjct: 525 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKTVDNNNYKYTKEKEPYFC 584
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLD RVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 585 SSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 644
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTT+G VSFYREIEEA+QGFCRAYSY I
Sbjct: 645 VKKEIRCIYIRTTMGRVSFYREIEEAVQGFCRAYSYAI 682
>gb|AEX94462.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
Length = 685
Score = 793 bits (2048), Expect = 0.0
Identities = 391/398 (98%), Positives = 393/398 (98%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNK VDNNNYKYTKEKEPYFC
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKTVDNNNYKYTKEKEPYFC 587
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLD RVIGSREVPIEVQYESLGTYHEIYGHYLIVGS
Sbjct: 588 SSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 647
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTT+G VSFYREIEEA+QGFCRAYSY I
Sbjct: 648 VKKEIRCIYIRTTMGRVSFYREIEEAVQGFCRAYSYAI 685
>gb|AEX94500.1| RNA polymerase beta (chloroplast) [Sansevieria trifasciata]
Length = 688
Score = 793 bits (2048), Expect = 0.0
Identities = 393/401 (98%), Positives = 395/401 (98%), Gaps = 3/401 (0%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 288 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 347
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 348 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 407
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHI SNIGIAK+KIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 408 LFQTFVIRGLIRQHIVSNIGIAKNKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 467
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 468 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 527
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNY---KYTKEKEP 892
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNKKVD NNY KYTKEKEP
Sbjct: 528 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKKVDKNNYKYNKYTKEKEP 587
Query: 893 YFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLI 1072
YFCSSYDALGAY+QKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLI
Sbjct: 588 YFCSSYDALGAYQQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLI 647
Query: 1073 VGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 648 VGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 688
>ref|YP_009045557.1| RNA polymerase beta subunit (chloroplast) [Cypripedium macranthos]
ref|YP_009335155.1| RNA polymerase beta (chloroplast) [Hosta ventricosa]
gb|AHI16740.1| RNA polymerase beta subunit (chloroplast) (chloroplast) [Cypripedium
macranthos]
gb|APO12213.1| RNA polymerase beta (chloroplast) [Hosta ventricosa]
Length = 682
Score = 792 bits (2046), Expect = 0.0
Identities = 389/398 (97%), Positives = 393/398 (98%)
Frame = +2
Query: 2 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQP 181
GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGEL+MCQEKLVQEAVDTLLDNGIRGQP
Sbjct: 285 GKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELIMCQEKLVQEAVDTLLDNGIRGQP 344
Query: 182 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 361
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHQCGLPREIAIE 404
Query: 362 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 541
LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ
Sbjct: 405 LFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQ 464
Query: 542 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 721
AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI
Sbjct: 465 AFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAI 524
Query: 722 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQNKKVDNNNYKYTKEKEPYFC 901
GDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQNK VDNNNYKYTK+KEPYFC
Sbjct: 525 GDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQNKTVDNNNYKYTKKKEPYFC 584
Query: 902 SSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEVQYESLGTYHEIYGHYLIVGS 1081
SSYDALGAYRQKRINLDSPFWLRWRLD RVIGSREVPIEVQYESLGTYHEIYGHYLI GS
Sbjct: 585 SSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREVPIEVQYESLGTYHEIYGHYLIGGS 644
Query: 1082 VKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1195
VKKEIRCIYIRTT+GHVSFYREIEEA+QGFCRAYSY I
Sbjct: 645 VKKEIRCIYIRTTIGHVSFYREIEEAVQGFCRAYSYAI 682