BLASTX nr result
ID: Ophiopogon27_contig00020696
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00020696
(898 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK78802.1| uncharacterized protein A4U43_C02F22580 [Asparagu... 73 9e-28
ref|XP_020255008.1| protein CHUP1, chloroplastic [Asparagus offi... 73 9e-28
ref|XP_020273292.1| probable RNA polymerase II transcription fac... 102 8e-24
gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus... 102 8e-24
ref|XP_008805063.1| PREDICTED: protein CHUP1, chloroplastic [Pho... 65 2e-22
ref|XP_010914782.1| PREDICTED: protein CHUP1, chloroplastic [Ela... 66 3e-22
ref|XP_009414712.1| PREDICTED: probable RNA polymerase II transc... 86 2e-18
ref|XP_010913638.1| PREDICTED: probable RNA polymerase II transc... 85 7e-18
ref|XP_010913639.1| PREDICTED: probable RNA polymerase II transc... 85 7e-18
ref|XP_010913640.1| PREDICTED: probable RNA polymerase II transc... 85 7e-18
ref|XP_019704306.1| PREDICTED: probable RNA polymerase II transc... 85 7e-18
ref|XP_020103739.1| probable RNA polymerase II transcription fac... 85 1e-17
gb|OAY75981.1| putative RNA polymerase II transcription factor B... 85 1e-17
ref|XP_009402489.1| PREDICTED: protein CHUP1, chloroplastic isof... 63 1e-17
ref|XP_018681763.1| PREDICTED: protein CHUP1, chloroplastic isof... 63 1e-17
ref|XP_008800215.1| PREDICTED: probable RNA polymerase II transc... 86 2e-17
ref|XP_010928645.1| PREDICTED: probable RNA polymerase II transc... 84 2e-17
ref|XP_017700274.1| PREDICTED: probable RNA polymerase II transc... 86 2e-17
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 86 2e-17
ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transc... 86 2e-17
>gb|ONK78802.1| uncharacterized protein A4U43_C02F22580 [Asparagus officinalis]
Length = 921
Score = 72.8 bits (177), Expect(3) = 9e-28
Identities = 40/63 (63%), Positives = 45/63 (71%)
Frame = -3
Query: 191 SLVKELQSEVEALTEQVEKLQSSNVHLELQNKQLGKDLFSAEEKIRTLEKHDQIEHVSKE 12
SLV EL+SEV AL Q+EKL S NV LE QNKQLG+DL AE KI LEK D+ E +SKE
Sbjct: 119 SLVNELRSEVSALKAQMEKLHSRNVLLESQNKQLGRDLSLAEAKIIALEKKDEAESISKE 178
Query: 11 IWP 3
P
Sbjct: 179 FHP 181
Score = 67.8 bits (164), Expect(3) = 9e-28
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -1
Query: 433 KSMPETTSPPEGNNISRVRRPILPTKPKEREVEDPMIVDQLQTCTVERYVRVRRHVDTNC 254
K+ P+T P E NN SR+RRPI D VDQ +T V++Y RVRRH D NC
Sbjct: 44 KASPKTP-PKEANNSSRIRRPI-------DLANDQKGVDQPRTRAVDQYARVRRHSDMNC 95
Query: 253 KG*EFQSDRKVKDDL-RRLHV 194
KG Q+D K+KDDL RRLHV
Sbjct: 96 KGLGSQNDGKLKDDLERRLHV 116
Score = 32.7 bits (73), Expect(3) = 9e-28
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 516 VPATRARVSRTKDSSRVDT-NGVLLSPGSKACPK 418
+P RARVSRTK+SSR+ + NGV SKA PK
Sbjct: 20 MPVARARVSRTKESSRLGSPNGV-----SKASPK 48
>ref|XP_020255008.1| protein CHUP1, chloroplastic [Asparagus officinalis]
Length = 541
Score = 72.8 bits (177), Expect(3) = 9e-28
Identities = 40/63 (63%), Positives = 45/63 (71%)
Frame = -3
Query: 191 SLVKELQSEVEALTEQVEKLQSSNVHLELQNKQLGKDLFSAEEKIRTLEKHDQIEHVSKE 12
SLV EL+SEV AL Q+EKL S NV LE QNKQLG+DL AE KI LEK D+ E +SKE
Sbjct: 119 SLVNELRSEVSALKAQMEKLHSRNVLLESQNKQLGRDLSLAEAKIIALEKKDEAESISKE 178
Query: 11 IWP 3
P
Sbjct: 179 FHP 181
Score = 67.8 bits (164), Expect(3) = 9e-28
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -1
Query: 433 KSMPETTSPPEGNNISRVRRPILPTKPKEREVEDPMIVDQLQTCTVERYVRVRRHVDTNC 254
K+ P+T P E NN SR+RRPI D VDQ +T V++Y RVRRH D NC
Sbjct: 44 KASPKTP-PKEANNSSRIRRPI-------DLANDQKGVDQPRTRAVDQYARVRRHSDMNC 95
Query: 253 KG*EFQSDRKVKDDL-RRLHV 194
KG Q+D K+KDDL RRLHV
Sbjct: 96 KGLGSQNDGKLKDDLERRLHV 116
Score = 32.7 bits (73), Expect(3) = 9e-28
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 516 VPATRARVSRTKDSSRVDT-NGVLLSPGSKACPK 418
+P RARVSRTK+SSR+ + NGV SKA PK
Sbjct: 20 MPVARARVSRTKESSRLGSPNGV-----SKASPK 48
>ref|XP_020273292.1| probable RNA polymerase II transcription factor B subunit 1-1
[Asparagus officinalis]
Length = 605
Score = 102 bits (255), Expect(2) = 8e-24
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
YV +MSEKDFWTKYCRAEYLQWS+NSATV AEAAE EDLAIFLK DDI+ANEARRK
Sbjct: 230 YVPRKMSEKDFWTKYCRAEYLQWSKNSATVAAEAAEDEDLAIFLKQDDILANEARRK 286
Score = 37.0 bits (84), Expect(2) = 8e-24
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IFVEKPAVLRAFLN VP K+
Sbjct: 215 QIFVEKPAVLRAFLNYVPRKM 235
>gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus officinalis]
Length = 596
Score = 102 bits (255), Expect(2) = 8e-24
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
YV +MSEKDFWTKYCRAEYLQWS+NSATV AEAAE EDLAIFLK DDI+ANEARRK
Sbjct: 221 YVPRKMSEKDFWTKYCRAEYLQWSKNSATVAAEAAEDEDLAIFLKQDDILANEARRK 277
Score = 37.0 bits (84), Expect(2) = 8e-24
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IFVEKPAVLRAFLN VP K+
Sbjct: 206 QIFVEKPAVLRAFLNYVPRKM 226
>ref|XP_008805063.1| PREDICTED: protein CHUP1, chloroplastic [Phoenix dactylifera]
Length = 565
Score = 65.1 bits (157), Expect(3) = 2e-22
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = -3
Query: 188 LVKELQSEVEALTEQVEKLQSSNVHLELQNKQLGKDLFSAEEKIRTLEKHDQIEHVSKEI 9
LVKELQSEV L +Q+EKLQ N+ L+ QNKQL +DL +AE KIR L+ +Q+ + +E
Sbjct: 135 LVKELQSEVVGLKDQIEKLQGVNLQLKSQNKQLEEDLLAAEGKIRALQTSEQVVSIGQEA 194
Query: 8 WP 3
P
Sbjct: 195 KP 196
Score = 51.2 bits (121), Expect(3) = 2e-22
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Frame = -1
Query: 433 KSMPETTSPPEGNNISRVRRPILPTKPK----------EREVEDPMIVDQLQTCTVERYV 284
K+ P+ P E + RVRR I P KPK ERE ED + VE+Y
Sbjct: 43 KTRPKVV-PLEASTTQRVRRSIQPNKPKSGADEVGAPKERETEDSKNTSRPGNRVVEQYA 101
Query: 283 RVRRHVDTNCKG*EFQSDRKVKDDLRRL 200
R+RR DT+C+G E ++ K K+ R+L
Sbjct: 102 RLRRQGDTHCRGSEDEAGGKTKELQRKL 129
Score = 38.5 bits (88), Expect(3) = 2e-22
Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -2
Query: 528 SSPKVPATRARVSRTKDSSRVDT-NGVLLSPGSKACPK 418
SSP PA RAR+SRT+DS R D+ NGV +PGSK PK
Sbjct: 13 SSP-APAARARISRTRDSPRGDSANGV--APGSKTRPK 47
>ref|XP_010914782.1| PREDICTED: protein CHUP1, chloroplastic [Elaeis guineensis]
Length = 563
Score = 65.9 bits (159), Expect(3) = 3e-22
Identities = 33/59 (55%), Positives = 43/59 (72%)
Frame = -3
Query: 188 LVKELQSEVEALTEQVEKLQSSNVHLELQNKQLGKDLFSAEEKIRTLEKHDQIEHVSKE 12
LVKELQSE+ L Q+EKLQ N+ LE QNK+LG+DL AE KIR L++ +Q+ V +E
Sbjct: 135 LVKELQSEMVGLRAQIEKLQGVNLQLESQNKKLGEDLLDAEGKIRALQRSEQVVSVGQE 193
Score = 52.8 bits (125), Expect(3) = 3e-22
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Frame = -1
Query: 436 IKSMPETTSPPEGNNISRVRRPILPTK----------PKEREVEDPMIVDQLQTCTVERY 287
+K+ P+ P E N RVRR I K PKERE ED I + VE+Y
Sbjct: 42 LKTRPKVV-PLEANTTQRVRRSIQLNKTKLGADEVEAPKERETEDSKITSRPGNRVVEQY 100
Query: 286 VRVRRHVDTNCKG*EFQSDRKVKDDLRRL 200
R+RR DT+C+G E ++ K K+ R+L
Sbjct: 101 ARLRRQGDTHCRGSEDEAGGKTKELQRKL 129
Score = 35.8 bits (81), Expect(3) = 3e-22
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 528 SSPKVPATRARVSRTKDSSRVD-TNGVLLSPGSKACPK 418
SSP PA RAR+SRT+D+ R D NGV SPG K PK
Sbjct: 13 SSP-APAARARISRTRDNPRRDLANGV--SPGLKTRPK 47
>ref|XP_009414712.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Musa acuminata subsp. malaccensis]
Length = 602
Score = 86.3 bits (212), Expect(2) = 2e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHDDI+A+EARRK
Sbjct: 227 FVPSKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILADEARRK 283
Score = 35.0 bits (79), Expect(2) = 2e-18
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VPSK+
Sbjct: 212 QIFAEKPAVHRAFLNFVPSKM 232
>ref|XP_010913638.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Elaeis guineensis]
Length = 606
Score = 84.7 bits (208), Expect(2) = 7e-18
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHD+I+ANEAR K
Sbjct: 230 FVPSKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDEILANEARHK 286
Score = 35.0 bits (79), Expect(2) = 7e-18
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VPSK+
Sbjct: 215 QIFAEKPAVHRAFLNFVPSKM 235
>ref|XP_010913639.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Elaeis guineensis]
Length = 566
Score = 84.7 bits (208), Expect(2) = 7e-18
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHD+I+ANEAR K
Sbjct: 190 FVPSKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDEILANEARHK 246
Score = 35.0 bits (79), Expect(2) = 7e-18
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VPSK+
Sbjct: 175 QIFAEKPAVHRAFLNFVPSKM 195
>ref|XP_010913640.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X3 [Elaeis guineensis]
Length = 503
Score = 84.7 bits (208), Expect(2) = 7e-18
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHD+I+ANEAR K
Sbjct: 127 FVPSKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDEILANEARHK 183
Score = 35.0 bits (79), Expect(2) = 7e-18
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VPSK+
Sbjct: 112 QIFAEKPAVHRAFLNFVPSKM 132
>ref|XP_019704306.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X4 [Elaeis guineensis]
Length = 476
Score = 84.7 bits (208), Expect(2) = 7e-18
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHD+I+ANEAR K
Sbjct: 230 FVPSKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDEILANEARHK 286
Score = 35.0 bits (79), Expect(2) = 7e-18
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VPSK+
Sbjct: 215 QIFAEKPAVHRAFLNFVPSKM 235
>ref|XP_020103739.1| probable RNA polymerase II transcription factor B subunit 1-1
[Ananas comosus]
Length = 618
Score = 85.1 bits (209), Expect(2) = 1e-17
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHDDI+ANEAR K
Sbjct: 230 FVPTKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILANEARCK 286
Score = 33.9 bits (76), Expect(2) = 1e-17
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VP+K+
Sbjct: 215 QIFAEKPAVHRAFLNFVPTKM 235
>gb|OAY75981.1| putative RNA polymerase II transcription factor B subunit 1-1
[Ananas comosus]
Length = 586
Score = 85.1 bits (209), Expect(2) = 1e-17
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHDDI+ANEAR K
Sbjct: 220 FVPTKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILANEARCK 276
Score = 33.9 bits (76), Expect(2) = 1e-17
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VP+K+
Sbjct: 205 QIFAEKPAVHRAFLNFVPTKM 225
>ref|XP_009402489.1| PREDICTED: protein CHUP1, chloroplastic isoform X1 [Musa acuminata
subsp. malaccensis]
Length = 626
Score = 62.8 bits (151), Expect(3) = 1e-17
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = -3
Query: 188 LVKELQSEVEALTEQVEKLQSSNVHLELQNKQLGKDLFSAEEKIRTLEKHDQIEHVSK 15
L+++ QSEV AL Q+EKLQ NV LE Q K+L + L +AE KI+ LEKHDQ+E V K
Sbjct: 225 LLRDSQSEVLALRAQIEKLQVLNVELESQKKKLEESLSAAEAKIKVLEKHDQVESVIK 282
Score = 38.9 bits (89), Expect(3) = 1e-17
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -2
Query: 528 SSPKVPATRARVSRTKDSSRVDT-NGVLLSPGSKACPKP 415
SSP +PA RAR R K++ RVD+ NG SPG KA PKP
Sbjct: 105 SSPVLPAARARTPRMKETPRVDSANGG--SPGLKARPKP 141
Score = 37.0 bits (84), Expect(3) = 1e-17
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Frame = -1
Query: 436 IKSMPETTS-PPEGNNISRVRRPILPTK----------PKEREVEDPMIVDQLQTCTVER 290
+K+ P+ S G N++R + IL K PKER E+ +V VE+
Sbjct: 135 LKARPKPASVDASGTNVAR--KSILFNKLRPAINGVGDPKERNREEAKVVGSHD---VEQ 189
Query: 289 YVRVRRHVDTNCKG*EFQSDRKVKDDLRRL 200
Y R+RR DT+C+G E + K+++ RL
Sbjct: 190 YARLRRRADTSCRGSEDGASTKMRELQTRL 219
>ref|XP_018681763.1| PREDICTED: protein CHUP1, chloroplastic isoform X2 [Musa acuminata
subsp. malaccensis]
Length = 534
Score = 62.8 bits (151), Expect(3) = 1e-17
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = -3
Query: 188 LVKELQSEVEALTEQVEKLQSSNVHLELQNKQLGKDLFSAEEKIRTLEKHDQIEHVSK 15
L+++ QSEV AL Q+EKLQ NV LE Q K+L + L +AE KI+ LEKHDQ+E V K
Sbjct: 133 LLRDSQSEVLALRAQIEKLQVLNVELESQKKKLEESLSAAEAKIKVLEKHDQVESVIK 190
Score = 38.9 bits (89), Expect(3) = 1e-17
Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -2
Query: 528 SSPKVPATRARVSRTKDSSRVDT-NGVLLSPGSKACPKP 415
SSP +PA RAR R K++ RVD+ NG SPG KA PKP
Sbjct: 13 SSPVLPAARARTPRMKETPRVDSANGG--SPGLKARPKP 49
Score = 37.0 bits (84), Expect(3) = 1e-17
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Frame = -1
Query: 436 IKSMPETTS-PPEGNNISRVRRPILPTK----------PKEREVEDPMIVDQLQTCTVER 290
+K+ P+ S G N++R + IL K PKER E+ +V VE+
Sbjct: 43 LKARPKPASVDASGTNVAR--KSILFNKLRPAINGVGDPKERNREEAKVVGSHD---VEQ 97
Query: 289 YVRVRRHVDTNCKG*EFQSDRKVKDDLRRL 200
Y R+RR DT+C+G E + K+++ RL
Sbjct: 98 YARLRRRADTSCRGSEDGASTKMRELQTRL 127
>ref|XP_008800215.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Phoenix dactylifera]
Length = 607
Score = 85.9 bits (211), Expect(2) = 2e-17
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHDDI+ANEAR K
Sbjct: 230 FVPIKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILANEARCK 286
Score = 32.7 bits (73), Expect(2) = 2e-17
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VP K+
Sbjct: 215 QIFAEKPAVHRAFLNFVPIKM 235
>ref|XP_010928645.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Elaeis guineensis]
Length = 607
Score = 83.6 bits (205), Expect(2) = 2e-17
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAA E+LA+FLK+DDI+ANEARRK
Sbjct: 230 FVPSKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAANDEELAVFLKNDDILANEARRK 286
Score = 35.0 bits (79), Expect(2) = 2e-17
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VPSK+
Sbjct: 215 QIFAEKPAVHRAFLNFVPSKM 235
>ref|XP_017700274.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Phoenix dactylifera]
Length = 606
Score = 85.9 bits (211), Expect(2) = 2e-17
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFWTKYCRAEYL ++NS AEAAE E+LA+FLKHDDI+ANEAR K
Sbjct: 230 FVPIKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILANEARCK 286
Score = 32.7 bits (73), Expect(2) = 2e-17
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV RAFLN VP K+
Sbjct: 215 QIFAEKPAVHRAFLNFVPIKM 235
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X1 [Vitis vinifera]
emb|CBI39821.3| unnamed protein product, partial [Vitis vinifera]
Length = 602
Score = 86.3 bits (212), Expect(2) = 2e-17
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFW KYCRAEYL +RN+ AEAAE E+LA+FLKHDDI+ANEARRK
Sbjct: 226 FVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRK 282
Score = 32.3 bits (72), Expect(2) = 2e-17
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV +AFLN VP+K+
Sbjct: 211 QIFAEKPAVHQAFLNFVPNKM 231
>ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 isoform X2 [Vitis vinifera]
Length = 576
Score = 86.3 bits (212), Expect(2) = 2e-17
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 686 YVNFQMSEKDFWTKYCRAEYLQWSRNSATVVAEAAEGEDLAIFLKHDDIVANEARRK 516
+V +M+EKDFW KYCRAEYL +RN+ AEAAE E+LA+FLKHDDI+ANEARRK
Sbjct: 226 FVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRK 282
Score = 32.3 bits (72), Expect(2) = 2e-17
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1
Query: 862 KIFVEKPAVLRAFLNLVPSKV 800
+IF EKPAV +AFLN VP+K+
Sbjct: 211 QIFAEKPAVHQAFLNFVPNKM 231