BLASTX nr result
ID: Ophiopogon27_contig00020633
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00020633
(544 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020270225.1| DNA repair helicase XPB1 isoform X3 [Asparag... 120 4e-28
ref|XP_020270223.1| DNA repair helicase XPB1 isoform X2 [Asparag... 120 4e-28
ref|XP_020270221.1| DNA repair helicase XPB1 isoform X1 [Asparag... 120 4e-28
ref|XP_022869021.1| DNA repair helicase XPB1-like [Olea europaea... 108 4e-27
ref|XP_008788735.1| PREDICTED: DNA repair helicase XPB1 isoform ... 112 2e-25
ref|XP_016500687.1| PREDICTED: DNA repair helicase XPB1-like [Ni... 108 4e-25
ref|XP_010275687.1| PREDICTED: DNA repair helicase XPB1 [Nelumbo... 110 7e-25
gb|KJB20625.1| hypothetical protein B456_003G156900 [Gossypium r... 109 1e-24
gb|PIN19680.1| RNA polymerase II transcription initiation [Handr... 110 1e-24
ref|XP_010934928.1| PREDICTED: DNA repair helicase XPB1 isoform ... 110 1e-24
ref|XP_010934926.1| PREDICTED: DNA repair helicase XPB1 isoform ... 110 1e-24
gb|KJB20626.1| hypothetical protein B456_003G156900 [Gossypium r... 109 2e-24
gb|KJB20624.1| hypothetical protein B456_003G156900 [Gossypium r... 109 2e-24
ref|XP_011080928.1| DNA repair helicase XPB1 [Sesamum indicum] 109 2e-24
ref|XP_016716142.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 109 2e-24
ref|XP_012471789.1| PREDICTED: DNA repair helicase XPB1-like iso... 109 2e-24
ref|XP_012471788.1| PREDICTED: DNA repair helicase XPB1-like iso... 109 2e-24
ref|XP_018623264.1| PREDICTED: DNA repair helicase XPB1 [Nicotia... 108 2e-24
ref|XP_018633737.1| PREDICTED: DNA repair helicase XPB1-like [Ni... 108 3e-24
ref|XP_016498300.1| PREDICTED: DNA repair helicase XPB1-like [Ni... 108 3e-24
>ref|XP_020270225.1| DNA repair helicase XPB1 isoform X3 [Asparagus officinalis]
Length = 667
Score = 120 bits (300), Expect = 4e-28
Identities = 67/90 (74%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
F TL EQLDLLSKVLSAGDDVVGLEQLEEDADDIALQK MVYMEY
Sbjct: 577 FHTLQEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKARRSVGSMSALSGASGMVYMEY 636
Query: 320 NT--GKKGHGQAKSKPKDPAKRHHLFRKRF 237
NT GKKGHG KSKPKDPAKRHHLFRKR+
Sbjct: 637 NTGQGKKGHG--KSKPKDPAKRHHLFRKRY 664
>ref|XP_020270223.1| DNA repair helicase XPB1 isoform X2 [Asparagus officinalis]
ref|XP_020270224.1| DNA repair helicase XPB1 isoform X2 [Asparagus officinalis]
Length = 765
Score = 120 bits (300), Expect = 4e-28
Identities = 67/90 (74%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
F TL EQLDLLSKVLSAGDDVVGLEQLEEDADDIALQK MVYMEY
Sbjct: 675 FHTLQEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKARRSVGSMSALSGASGMVYMEY 734
Query: 320 NT--GKKGHGQAKSKPKDPAKRHHLFRKRF 237
NT GKKGHG KSKPKDPAKRHHLFRKR+
Sbjct: 735 NTGQGKKGHG--KSKPKDPAKRHHLFRKRY 762
>ref|XP_020270221.1| DNA repair helicase XPB1 isoform X1 [Asparagus officinalis]
ref|XP_020270222.1| DNA repair helicase XPB1 isoform X1 [Asparagus officinalis]
gb|ONK66043.1| uncharacterized protein A4U43_C06F3580 [Asparagus officinalis]
Length = 766
Score = 120 bits (300), Expect = 4e-28
Identities = 67/90 (74%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
F TL EQLDLLSKVLSAGDDVVGLEQLEEDADDIALQK MVYMEY
Sbjct: 676 FHTLQEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKARRSVGSMSALSGASGMVYMEY 735
Query: 320 NT--GKKGHGQAKSKPKDPAKRHHLFRKRF 237
NT GKKGHG KSKPKDPAKRHHLFRKR+
Sbjct: 736 NTGQGKKGHG--KSKPKDPAKRHHLFRKRY 763
>ref|XP_022869021.1| DNA repair helicase XPB1-like [Olea europaea var. sylvestris]
Length = 124
Score = 108 bits (270), Expect = 4e-27
Identities = 60/89 (67%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ LDEQL LL KVLSAGDD VGLEQLEED D IALQK MVYMEY
Sbjct: 35 YSRLDEQLALLGKVLSAGDDAVGLEQLEEDTDGIALQKARRSAGSMSAMSGASGMVYMEY 94
Query: 320 NTG-KKGHGQAKSKPKDPAKRHHLFRKRF 237
+TG KK HGQAKSK KDPAKRHHLF+KRF
Sbjct: 95 STGQKKQHGQAKSKFKDPAKRHHLFKKRF 123
>ref|XP_008788735.1| PREDICTED: DNA repair helicase XPB1 isoform X2 [Phoenix
dactylifera]
ref|XP_017698103.1| PREDICTED: DNA repair helicase XPB1 isoform X1 [Phoenix
dactylifera]
Length = 769
Score = 112 bits (280), Expect = 2e-25
Identities = 60/90 (66%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ +LDEQLDLLSK+LSAGDD VGLEQLEED D +ALQK MVYMEY
Sbjct: 679 YHSLDEQLDLLSKLLSAGDDAVGLEQLEEDQDGMALQKHRRYATSMSTLSGASGMVYMEY 738
Query: 320 NTGK-KGHGQAKSKPKDPAKRHHLFRKRFQ 234
NTGK K GQ KSKPKDP+KRHHLF+KRFQ
Sbjct: 739 NTGKHKQGGQVKSKPKDPSKRHHLFKKRFQ 768
>ref|XP_016500687.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
ref|XP_016500745.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
Length = 351
Score = 108 bits (271), Expect = 4e-25
Identities = 57/88 (64%), Positives = 62/88 (70%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ LD+QL LL KVL+AGDD VGLEQL+EDADDIALQK MVYMEY
Sbjct: 263 YHRLDDQLQLLGKVLNAGDDAVGLEQLDEDADDIALQKARRYVGSMSAMSGAKGMVYMEY 322
Query: 320 NTGKKGHGQAKSKPKDPAKRHHLFRKRF 237
NTGKK G KSKPKDPAKRH LF+KRF
Sbjct: 323 NTGKKQGGLIKSKPKDPAKRHQLFKKRF 350
>ref|XP_010275687.1| PREDICTED: DNA repair helicase XPB1 [Nelumbo nucifera]
Length = 769
Score = 110 bits (276), Expect = 7e-25
Identities = 61/91 (67%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
F LDEQL LL KVLSAGDDVVGLEQLEEDADDIALQK MVYMEY
Sbjct: 678 FHRLDEQLALLGKVLSAGDDVVGLEQLEEDADDIALQKARRSVGSMSAMSGASGMVYMEY 737
Query: 320 NTGKK---GHGQAKSKPKDPAKRHHLFRKRF 237
NTG+ G GQ KSKPKDP+KRH LF+KRF
Sbjct: 738 NTGRSKHPGQGQIKSKPKDPSKRHFLFKKRF 768
>gb|KJB20625.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 497
Score = 109 bits (273), Expect = 1e-24
Identities = 59/88 (67%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Frame = -3
Query: 491 LDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG 312
LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K MVYMEY+TG
Sbjct: 409 LDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTG 468
Query: 311 K---KGHGQAKSKPKDPAKRHHLFRKRF 237
K GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 469 KHKLMGHGQNKSKPKDPSKRHHLFKKRF 496
>gb|PIN19680.1| RNA polymerase II transcription initiation [Handroanthus
impetiginosus]
Length = 766
Score = 110 bits (274), Expect = 1e-24
Identities = 59/89 (66%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ L++QL LL KVLSAGDD VGLEQLEEDADDIALQK MVYMEY
Sbjct: 677 YHRLEDQLALLGKVLSAGDDAVGLEQLEEDADDIALQKARRSVGSMSAMSGASGMVYMEY 736
Query: 320 NTG-KKGHGQAKSKPKDPAKRHHLFRKRF 237
TG KK HGQ KSKPKDP+KRHHLF+KRF
Sbjct: 737 GTGQKKLHGQTKSKPKDPSKRHHLFKKRF 765
>ref|XP_010934928.1| PREDICTED: DNA repair helicase XPB1 isoform X2 [Elaeis guineensis]
Length = 769
Score = 110 bits (274), Expect = 1e-24
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ +LDEQLDLLSKVL+AGDD VGLEQLEED D +ALQK MVYMEY
Sbjct: 677 YHSLDEQLDLLSKVLTAGDDAVGLEQLEEDQDGMALQKHRRYATSMSTLSGASGMVYMEY 736
Query: 320 NTGKK---GHGQAKSKPKDPAKRHHLFRKRFQ 234
NTGK G GQ KSKPKDP+KRH+LF+KRFQ
Sbjct: 737 NTGKHKQGGPGQVKSKPKDPSKRHYLFKKRFQ 768
>ref|XP_010934926.1| PREDICTED: DNA repair helicase XPB1 isoform X1 [Elaeis guineensis]
Length = 770
Score = 110 bits (274), Expect = 1e-24
Identities = 59/92 (64%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ +LDEQLDLLSKVL+AGDD VGLEQLEED D +ALQK MVYMEY
Sbjct: 678 YHSLDEQLDLLSKVLTAGDDAVGLEQLEEDQDGMALQKHRRYATSMSTLSGASGMVYMEY 737
Query: 320 NTGKK---GHGQAKSKPKDPAKRHHLFRKRFQ 234
NTGK G GQ KSKPKDP+KRH+LF+KRFQ
Sbjct: 738 NTGKHKQGGPGQVKSKPKDPSKRHYLFKKRFQ 769
>gb|KJB20626.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 724
Score = 109 bits (273), Expect = 2e-24
Identities = 59/88 (67%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Frame = -3
Query: 491 LDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG 312
LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K MVYMEY+TG
Sbjct: 636 LDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTG 695
Query: 311 K---KGHGQAKSKPKDPAKRHHLFRKRF 237
K GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 696 KHKLMGHGQNKSKPKDPSKRHHLFKKRF 723
>gb|KJB20624.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 747
Score = 109 bits (273), Expect = 2e-24
Identities = 59/88 (67%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Frame = -3
Query: 491 LDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG 312
LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K MVYMEY+TG
Sbjct: 659 LDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTG 718
Query: 311 K---KGHGQAKSKPKDPAKRHHLFRKRF 237
K GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 719 KHKLMGHGQNKSKPKDPSKRHHLFKKRF 746
>ref|XP_011080928.1| DNA repair helicase XPB1 [Sesamum indicum]
Length = 766
Score = 109 bits (273), Expect = 2e-24
Identities = 59/89 (66%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ L++QL LL KVLSAGDD VGLEQLEEDADDIALQK MVYMEY
Sbjct: 677 YHRLEDQLALLGKVLSAGDDAVGLEQLEEDADDIALQKARRSAGSMSAMSGASGMVYMEY 736
Query: 320 NTG-KKGHGQAKSKPKDPAKRHHLFRKRF 237
+TG KK HGQ KSKPKDP KRHHLF+KRF
Sbjct: 737 STGQKKPHGQMKSKPKDPNKRHHLFKKRF 765
>ref|XP_016716142.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase XPB1-like
[Gossypium hirsutum]
Length = 770
Score = 109 bits (273), Expect = 2e-24
Identities = 59/88 (67%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Frame = -3
Query: 491 LDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG 312
LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K MVYMEY+TG
Sbjct: 682 LDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTG 741
Query: 311 K---KGHGQAKSKPKDPAKRHHLFRKRF 237
K GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 742 KHKLMGHGQNKSKPKDPSKRHHLFKKRF 769
>ref|XP_012471789.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Gossypium
raimondii]
gb|KJB20623.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 770
Score = 109 bits (273), Expect = 2e-24
Identities = 59/88 (67%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Frame = -3
Query: 491 LDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG 312
LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K MVYMEY+TG
Sbjct: 682 LDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTG 741
Query: 311 K---KGHGQAKSKPKDPAKRHHLFRKRF 237
K GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 742 KHKLMGHGQNKSKPKDPSKRHHLFKKRF 769
>ref|XP_012471788.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Gossypium
raimondii]
gb|KJB20627.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 796
Score = 109 bits (273), Expect = 2e-24
Identities = 59/88 (67%), Positives = 63/88 (71%), Gaps = 3/88 (3%)
Frame = -3
Query: 491 LDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG 312
LDEQL LL KVL+AGDD VGLEQLEEDADDIAL K MVYMEY+TG
Sbjct: 708 LDEQLALLGKVLTAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTG 767
Query: 311 K---KGHGQAKSKPKDPAKRHHLFRKRF 237
K GHGQ KSKPKDP+KRHHLF+KRF
Sbjct: 768 KHKLMGHGQNKSKPKDPSKRHHLFKKRF 795
>ref|XP_018623264.1| PREDICTED: DNA repair helicase XPB1 [Nicotiana tomentosiformis]
ref|XP_009589972.2| PREDICTED: DNA repair helicase XPB1 [Nicotiana tomentosiformis]
Length = 511
Score = 108 bits (271), Expect = 2e-24
Identities = 57/88 (64%), Positives = 62/88 (70%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ LD+QL LL KVL+AGDD VGLEQL+EDADDIALQK MVYMEY
Sbjct: 423 YHRLDDQLQLLGKVLNAGDDAVGLEQLDEDADDIALQKARRYVGSMSAMSGAKGMVYMEY 482
Query: 320 NTGKKGHGQAKSKPKDPAKRHHLFRKRF 237
NTGKK G KSKPKDPAKRH LF+KRF
Sbjct: 483 NTGKKQGGLIKSKPKDPAKRHQLFKKRF 510
>ref|XP_018633737.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana
tomentosiformis]
Length = 762
Score = 108 bits (271), Expect = 3e-24
Identities = 57/88 (64%), Positives = 62/88 (70%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ LD+QL LL KVL+AGDD VGLEQL+EDADDIALQK MVYMEY
Sbjct: 674 YHRLDDQLQLLGKVLNAGDDAVGLEQLDEDADDIALQKARRYVGSMSAMSGAKGMVYMEY 733
Query: 320 NTGKKGHGQAKSKPKDPAKRHHLFRKRF 237
NTGKK G KSKPKDPAKRH LF+KRF
Sbjct: 734 NTGKKQGGLIKSKPKDPAKRHQLFKKRF 761
>ref|XP_016498300.1| PREDICTED: DNA repair helicase XPB1-like [Nicotiana tabacum]
Length = 769
Score = 108 bits (271), Expect = 3e-24
Identities = 57/88 (64%), Positives = 62/88 (70%)
Frame = -3
Query: 500 FDTLDEQLDLLSKVLSAGDDVVGLEQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEY 321
+ LD+QL LL KVL+AGDD VGLEQL+EDADDIALQK MVYMEY
Sbjct: 681 YHRLDDQLQLLGKVLNAGDDAVGLEQLDEDADDIALQKARRYVGSMSAMSGAKGMVYMEY 740
Query: 320 NTGKKGHGQAKSKPKDPAKRHHLFRKRF 237
NTGKK G KSKPKDPAKRH LF+KRF
Sbjct: 741 NTGKKQGGLIKSKPKDPAKRHQLFKKRF 768