BLASTX nr result

ID: Ophiopogon27_contig00020426 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00020426
         (615 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252277.1| F-box protein At2g17036-like [Asparagus offi...    81   7e-15
ref|XP_020246827.1| F-box protein SKIP23-like [Asparagus officin...    79   6e-14
ref|XP_020254303.1| F-box protein At2g17036-like [Asparagus offi...    69   4e-10
ref|XP_010266939.1| PREDICTED: F-box protein SKIP23-like [Nelumb...    60   3e-07
ref|XP_010671932.1| PREDICTED: F-box protein At2g26160 [Beta vul...    58   2e-06
ref|XP_015072731.1| PREDICTED: F-box protein At2g26160-like [Sol...    57   5e-06
ref|XP_009354047.1| PREDICTED: F-box protein At2g26160-like [Pyr...    56   9e-06

>ref|XP_020252277.1| F-box protein At2g17036-like [Asparagus officinalis]
          Length = 261

 Score = 80.9 bits (198), Expect = 7e-15
 Identities = 56/158 (35%), Positives = 76/158 (48%)
 Frame = +2

Query: 41  KHFVQSMTGELFMLIRTSYPTTGEIRFLITRLDLDRNEYVPVDDLEDLVFFVGTNESTVV 220
           K  V+S+ G+L+ML +  Y       F+  RLD D  E+ P DDL D VFFVG+N S  V
Sbjct: 140 KLLVESLNGKLYMLYKGLYYDA----FMAIRLDADNPEFNPEDDLGDNVFFVGSNTSFSV 195

Query: 221 SATKFSEVKRNRVYFTEYYCITGFYIKFGVQPWKKWKRDIPSPWKPCPPFDIGVYDVEKK 400
           SATKF E+  N +YFT+       ++K                     P ++GV+DV K 
Sbjct: 196 SATKFPELGGNCIYFTDDKNFDFDHLKH-------------------KPREMGVFDV-KN 235

Query: 401 KQTELLDNIGSHLSWEEKNHFGLLLNWPPATWITPTAF 514
              + + N+G H            L+WPP  WI PT F
Sbjct: 236 WSMKPIPNLGQH------------LHWPPPIWIIPTLF 261


>ref|XP_020246827.1| F-box protein SKIP23-like [Asparagus officinalis]
 gb|ONK57914.1| uncharacterized protein A4U43_C09F5570 [Asparagus officinalis]
          Length = 309

 Score = 79.0 bits (193), Expect = 6e-14
 Identities = 55/158 (34%), Positives = 77/158 (48%)
 Frame = +2

Query: 41  KHFVQSMTGELFMLIRTSYPTTGEIRFLITRLDLDRNEYVPVDDLEDLVFFVGTNESTVV 220
           K  V+S+ G+L+ML +  Y  T    F+  RLD D  E++P +DL D VFFVG+N    V
Sbjct: 188 KLLVESLNGKLYMLYKGLYYNT----FMAIRLDADNPEFIPENDLGDNVFFVGSNTLFSV 243

Query: 221 SATKFSEVKRNRVYFTEYYCITGFYIKFGVQPWKKWKRDIPSPWKPCPPFDIGVYDVEKK 400
           SATKF E+  + +YFT+       Y  F     +              P ++GV+DV K 
Sbjct: 244 SATKFPELGGSCIYFTD-----DVYFDFDNLEHE--------------PREMGVFDV-KN 283

Query: 401 KQTELLDNIGSHLSWEEKNHFGLLLNWPPATWITPTAF 514
              + + N+G H            L+WPP  WI PT F
Sbjct: 284 GSMKPIRNLGQH------------LHWPPPIWIIPTLF 309


>ref|XP_020254303.1| F-box protein At2g17036-like [Asparagus officinalis]
          Length = 394

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 53/156 (33%), Positives = 71/156 (45%)
 Frame = +2

Query: 41  KHFVQSMTGELFMLIRTSYPTTGEIRFLITRLDLDRNEYVPVDDLEDLVFFVGTNESTVV 220
           K  V+S+ G+L+M  +  Y  T    F+  RLD D  E+ P DDL D V FV +N S  V
Sbjct: 259 KLLVESLNGKLYMQYKGLYYNT----FMAIRLDTDNPEFNPEDDLGDNVIFVDSNTSFSV 314

Query: 221 SATKFSEVKRNRVYFTEYYCITGFYIKFGVQPWKKWKRDIPSPWKPCPPFDIGVYDVEKK 400
           SATKF E+  N +YFT+       Y  F     K              P ++GV+DV K 
Sbjct: 315 SATKFPELGGNCIYFTD-----DAYFDFDHLKHK--------------PREMGVFDV-KN 354

Query: 401 KQTELLDNIGSHLSWEEKNHFGLLLNWPPATWITPT 508
              + + N+               L+WPP  WI PT
Sbjct: 355 GSMKPIPNLRQR------------LHWPPPIWIIPT 378


>ref|XP_010266939.1| PREDICTED: F-box protein SKIP23-like [Nelumbo nucifera]
          Length = 388

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
 Frame = +2

Query: 47  FVQSMTGELFMLIR----------TSYPTTGEIRFLITRLDLDRNEYVPVDDLEDLVFFV 196
           ++   +GEL ++ R           +Y T   IRF + +LD     +V +  + D V F+
Sbjct: 256 YLVEQSGELLLVTRHLELGLVEPDMAYKT---IRFEVAKLDSSSQNWVKLKGIGDHVLFL 312

Query: 197 GTNESTVVSATKFSEVKRNRVYFTEYYCITGFYIKFGVQPWKKWKRDIPSPWKPCPPFDI 376
           G N S  +SA+ + E +RN +YFT+ Y    F    GV+                  +D+
Sbjct: 313 GKNSSLSLSASDYPECRRNCIYFTDDYSEVNFE---GVR----------------GDYDV 353

Query: 377 GVYDVEKKKQTELLDNIGSHLSWEEKNHFGLLLNWPPATWITPTAF 514
           GV+++E        D+I   L + + +    LL WPP  WITP  F
Sbjct: 354 GVFNLED-------DSIEPLLCYSQSS----LLIWPPPLWITPNPF 388


>ref|XP_010671932.1| PREDICTED: F-box protein At2g26160 [Beta vulgaris subsp. vulgaris]
 gb|KMT16206.1| hypothetical protein BVRB_3g053650 [Beta vulgaris subsp. vulgaris]
          Length = 381

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
 Frame = +2

Query: 113 IRFLITRLDLD---RNEYVPVDDLEDLVFFVGTNESTVVSATKFSEVKRNRVYFTEYYCI 283
           I F I ++ +D   RN+++ ++ LED   F+G N S  VSA++F   + N +YFT+ Y  
Sbjct: 272 IGFFIYKMVVDDNGRNDWLSIETLEDGALFLGDNYSLYVSASQFPGCRSNSIYFTDDYHD 331

Query: 284 TGFYIKFGVQPWKKWKRDIPSPWKPCPPFDIGVYDVEKKKQTELLDNIGSHLSWEEKNHF 463
           T   +               +P++   PFDIGV+ +++K+    +D    ++   E+ HF
Sbjct: 332 TDAMLL--------------NPYQLAGPFDIGVFLLDEKR----IDRY--YIPMAEEYHF 371

Query: 464 GLLLNWPPATWITPT 508
                 PP  WI PT
Sbjct: 372 ------PPPIWILPT 380


>ref|XP_015072731.1| PREDICTED: F-box protein At2g26160-like [Solanum pennellii]
          Length = 392

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/56 (44%), Positives = 37/56 (66%)
 Frame = +2

Query: 104 TGEIRFLITRLDLDRNEYVPVDDLEDLVFFVGTNESTVVSATKFSEVKRNRVYFTE 271
           +G I F + ++DLD + Y P+ DL D  FF+G N S  V A++FS +K N +YFT+
Sbjct: 287 SGTIFFFVFKIDLDAHRYTPIWDLGDRAFFLGANASFSVQASQFSGIKPNHIYFTD 342


>ref|XP_009354047.1| PREDICTED: F-box protein At2g26160-like [Pyrus x bretschneideri]
          Length = 417

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
 Frame = +2

Query: 41  KHFVQSMTGELFMLIRTSYPT-------TGEIRFLITRLDL---DRNEYVPVDDLEDLVF 190
           K FV+S++ + F   +  +         T  + F + +L     DR ++V V+ + +   
Sbjct: 281 KRFVKSLSFKFFNFEKLEFEQVNGYDRFTETLSFKVFKLFSSYEDRPQWVEVESIGNDAL 340

Query: 191 FVGTNESTVVSATKFSEVKRNRVYFTEYYCITGFYIKFGVQPWKKWKRDIPSPWKPCPPF 370
           F+GTN+S  VSA+ F   + N +YF +  C+                 D+ +  KP  P 
Sbjct: 341 FLGTNQSMCVSASHFQGCRPNSIYFAD-DCV-----------------DV-ACHKPKGPH 381

Query: 371 DIGVYDVEKKKQTELLDNIGSHLSWEEKNHFGLLLNWPPATWITPT 508
           D+GV+D+E K       ++G H  W+         + PPA WI PT
Sbjct: 382 DMGVFDIENK-------SMGRHYCWDRSQK-----HMPPAIWILPT 415


Top