BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00020394
         (1086 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc...   163   9e-41
gb|ABF98935.1| retrotransposon protein, putative, Ty1-copia subc...   160   1e-40
gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japo...   161   2e-40
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   162   2e-40
gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subc...   162   2e-40
gb|PHT56189.1| hypothetical protein CQW23_04675 [Capsicum baccatum]   161   5e-40
emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]        161   6e-40
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         161   6e-40
gb|PHT39301.1| hypothetical protein CQW23_22874 [Capsicum baccatum]   161   7e-40
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         160   8e-40
gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group...   160   1e-39
gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group...   159   2e-39
gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]     159   3e-39
emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]         159   3e-39
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc...   159   3e-39
gb|AAK50117.1|AC087797_2 putative gag-pol polyprotein [Oryza sat...   159   3e-39
gb|ABF98465.1| retrotransposon protein, putative, Ty1-copia subc...   159   3e-39
gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subc...   159   3e-39
gb|AAP53927.1| retrotransposon protein, putative, Ty1-copia subc...   159   3e-39
gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]     159   3e-39

>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1075

 Score =  163 bits (413), Expect = 9e-41
 Identities = 84/161 (52%), Positives = 113/161 (70%), Gaps = 10/161 (6%)
 Frame = +3

Query: 12  YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
           + +EHGII ETT PYSPQSN +AERKNRTL  +VN++L  SGLP+  WGEA+    ++LN
Sbjct: 475 FHQEHGIIHETTPPYSPQSNGVAERKNRTLTNLVNAMLSNSGLPNYMWGEALYTACFVLN 534

Query: 192 RVPYSKTNTTPHQLWLGYSVSLD--KLWGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
           RVP   T  TP++LW G   +L+  K+WGCLA V IP + + KLGPK   CVF+G+A+NS
Sbjct: 535 RVPAKGTEVTPYELWKGRKPNLNFLKVWGCLAKVNIPVVKKRKLGPKTVDCVFIGYAQNS 594

Query: 366 VAHRFL-------DLGTNSIIEARDAEFFEDKF-IKDKSLS 464
           +A+RFL       ++  N+++E+RD  FFED F +K KS S
Sbjct: 595 LAYRFLVVKSETTEVRENTVMESRDTTFFEDTFPLKVKSPS 635


>gb|ABF98935.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 593

 Score =  160 bits (405), Expect = 1e-40
 Identities = 81/151 (53%), Positives = 105/151 (69%), Gaps = 9/151 (5%)
 Frame = +3

Query: 18  KEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILNRV 197
           KEHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LNRV
Sbjct: 329 KEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLNRV 388

Query: 198 PYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENSVA 371
           P    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S+A
Sbjct: 389 PNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIA 448

Query: 372 HRFL-------DLGTNSIIEARDAEFFEDKF 443
           +RFL       D+   +I+E+RDA FFE  F
Sbjct: 449 YRFLIVKSEVPDMHVGTIMESRDATFFESFF 479


>gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japonica Group]
          Length = 679

 Score =  161 bits (407), Expect = 2e-40
 Identities = 81/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12  YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
           + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 312 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 371

Query: 192 RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
           RVP    N TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 372 RVPNRNKNKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 431

Query: 366 VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
           +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 432 IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 464


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  162 bits (410), Expect = 2e-40
 Identities = 81/150 (54%), Positives = 106/150 (70%), Gaps = 9/150 (6%)
 Frame = +3

Query: 21   EHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILNRVP 200
            +HGII ETTAPYSPQSN +AERKNRTL EM+N++LI+S LP   WGEAIL  N++LN+VP
Sbjct: 612  QHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLPQNMWGEAILTANYLLNKVP 671

Query: 201  YSKTNTTPHQLWLGYSVSLD--KLWGCLAYVRIPDIIRPKLGPKANRCVFLGFAENSVAH 374
              K   TP++LW G   S    ++WGCLA V +P   + K+GPK   C+F+G+A NS A+
Sbjct: 672  KKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAY 731

Query: 375  RFL-------DLGTNSIIEARDAEFFEDKF 443
            RFL       D+  N+I+E+R+A FFED F
Sbjct: 732  RFLVYESNIPDIHKNTIMESRNASFFEDVF 761


>gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1361

 Score =  162 bits (410), Expect = 2e-40
 Identities = 81/153 (52%), Positives = 107/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            +F+EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 657  FFEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 716

Query: 192  RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 717  RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 776

Query: 366  VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
            +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 777  IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 809


>gb|PHT56189.1| hypothetical protein CQW23_04675 [Capsicum baccatum]
          Length = 921

 Score =  161 bits (407), Expect = 5e-40
 Identities = 84/148 (56%), Positives = 109/148 (73%), Gaps = 9/148 (6%)
 Frame = +3

Query: 21   EHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILNRVP 200
            E+GII +TTAPYSPQSN IAERKNRTL EM+N++LI+SGLP   WGEAIL  N ILNRVP
Sbjct: 579  ENGIIHQTTAPYSPQSNGIAERKNRTLKEMMNALLISSGLPQNLWGEAILTANRILNRVP 638

Query: 201  YSKTNTTPHQLWLGYSVSLD--KLWGCLAYVRIPDIIRPKLGPKANRCVFLGFAENSVAH 374
            +SKT + P++ W G   +L   K+WGCLA V++P   R K+GPK   CVF+G+A++S A 
Sbjct: 639  HSKTQSIPYEKWKGRKPNLKYFKVWGCLAKVQVPIPKRVKIGPKTVDCVFIGYAKSSKAC 698

Query: 375  RFL-------DLGTNSIIEARDAEFFED 437
            RFL       D+  N++IE+ +AEFFE+
Sbjct: 699  RFLVHKSEHSDINENTVIESDNAEFFEN 726


>emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
          Length = 1264

 Score =  161 bits (407), Expect = 6e-40
 Identities = 81/153 (52%), Positives = 107/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            + +EHGII E T PYSP+SNRIAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 572  FCEEHGIIHERTPPYSPESNRIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 631

Query: 192  RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 632  RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAYHS 691

Query: 366  VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
            +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 692  IAYRFLLVKSEVPDMHVGTIMESRDATFFESFF 724


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  161 bits (407), Expect = 6e-40
 Identities = 80/153 (52%), Positives = 107/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 572  FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 631

Query: 192  RVPYSKTNTTPHQLWLGYSVSLD--KLWGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    + TP+++W+G   SL   ++WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 632  RVPNRNKDKTPYEIWIGRKPSLSYLRIWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 691

Query: 366  VAHRF-------LDLGTNSIIEARDAEFFEDKF 443
            +A+RF       LD+   +IIE+RDA FFE  F
Sbjct: 692  IAYRFLIVKSEVLDMHVGTIIESRDATFFESFF 724


>gb|PHT39301.1| hypothetical protein CQW23_22874 [Capsicum baccatum]
          Length = 2088

 Score =  161 bits (407), Expect = 7e-40
 Identities = 84/148 (56%), Positives = 109/148 (73%), Gaps = 9/148 (6%)
 Frame = +3

Query: 21   EHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILNRVP 200
            E+GII +TTAPYSPQSN IAERKNRTL EM+N++LI+SGLP   WGEAIL  N ILNRVP
Sbjct: 1069 ENGIIHQTTAPYSPQSNGIAERKNRTLKEMMNALLISSGLPQNLWGEAILTANRILNRVP 1128

Query: 201  YSKTNTTPHQLWLGYSVSLD--KLWGCLAYVRIPDIIRPKLGPKANRCVFLGFAENSVAH 374
            +SKT + P++ W G   +L   K+WGCLA V++P   R K+GPK   CVF+G+A++S A 
Sbjct: 1129 HSKTQSIPYEKWKGRKPNLKYFKVWGCLAKVQVPIPKRVKIGPKTVDCVFIGYAKSSKAC 1188

Query: 375  RFL-------DLGTNSIIEARDAEFFED 437
            RFL       D+  N++IE+ +AEFFE+
Sbjct: 1189 RFLVHKSEHSDINENTVIESDNAEFFEN 1216


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  160 bits (406), Expect = 8e-40
 Identities = 80/153 (52%), Positives = 107/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N++LN
Sbjct: 572  FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNYVLN 631

Query: 192  RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 632  RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 691

Query: 366  VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
            +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 692  IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 724


>gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAV44157.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1046

 Score =  160 bits (404), Expect = 1e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12  YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
           + KEHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 316 FCKEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 375

Query: 192 RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
           RVP    + TP+++W+G   SL  L  WGCLA + +P   + KLGPK   CVFLG+A +S
Sbjct: 376 RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKINVPITKKRKLGPKTMDCVFLGYAHHS 435

Query: 366 VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
           +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 436 IAYRFLIVKSEVPDMHVGTIMESRDAIFFESFF 468


>gb|AAT39267.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAT85181.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1297

 Score =  159 bits (403), Expect = 2e-39
 Identities = 79/150 (52%), Positives = 105/150 (70%), Gaps = 9/150 (6%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L +N +LN
Sbjct: 572  FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTLNHVLN 631

Query: 192  RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    N TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 632  RVPNRNKNKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 691

Query: 366  VAHRFL-------DLGTNSIIEARDAEFFE 434
            +A+RFL       D+   +I+E+RD  FFE
Sbjct: 692  IAYRFLIVKSEVPDMHVGTIMESRDGTFFE 721


>gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1059

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 681  FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 740

Query: 192  RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 741  RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 800

Query: 366  VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
            +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 801  IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 833


>emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]
          Length = 1113

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12  YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
           + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 365 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 424

Query: 192 RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
           RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 425 RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 484

Query: 366 VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
           +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 485 IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 517


>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1151

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12  YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
           + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 443 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 502

Query: 192 RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
           RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 503 RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 562

Query: 366 VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
           +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 563 IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 595


>gb|AAK50117.1|AC087797_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1198

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12  YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
           + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 505 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 564

Query: 192 RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
           RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 565 RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 624

Query: 366 VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
           +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 625 IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 657


>gb|ABF98465.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1210

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12  YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
           + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 505 FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 564

Query: 192 RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
           RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 565 RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 624

Query: 366 VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
           +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 625 IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 657


>gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1249

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 572  FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 631

Query: 192  RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 632  RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 691

Query: 366  VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
            +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 692  IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 724


>gb|AAP53927.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1297

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 572  FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 631

Query: 192  RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 632  RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 691

Query: 366  VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
            +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 692  IAYRFLIVKSEVPDMHVGTIMESRDATFFESFF 724


>gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1297

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 9/153 (5%)
 Frame = +3

Query: 12   YFKEHGIIAETTAPYSPQSNRIAERKNRTLIEMVNSILITSGLPSCYWGEAILMVNWILN 191
            + +EHGII E T PYSP+SN IAERKNRTL ++VN++L T+GLP  +WGEA+L  N +LN
Sbjct: 572  FCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGEALLTSNHVLN 631

Query: 192  RVPYSKTNTTPHQLWLGYSVSLDKL--WGCLAYVRIPDIIRPKLGPKANRCVFLGFAENS 365
            RVP    + TP+++W+G   SL  L  WGCLA V +P   + KLGPK   CVFLG+A +S
Sbjct: 632  RVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHS 691

Query: 366  VAHRFL-------DLGTNSIIEARDAEFFEDKF 443
            +A+RFL       D+   +I+E+RDA FFE  F
Sbjct: 692  IAYRFLIVKSEIPDMHVGTIMESRDATFFESFF 724