BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00019827
         (494 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276646.1| LOW QUALITY PROTEIN: U3 small nucleolar RNA-...   231   1e-68
ref|XP_020241419.1| U3 small nucleolar RNA-associated protein 4 ...   228   1e-67
ref|XP_008810458.1| PREDICTED: U3 small nucleolar RNA-associated...   224   7e-66
ref|XP_010934832.1| PREDICTED: U3 small nucleolar RNA-associated...   221   7e-65
ref|XP_008778520.1| PREDICTED: U3 small nucleolar RNA-associated...   210   1e-60
gb|OVA03965.1| WD40 repeat [Macleaya cordata]                         207   2e-59
ref|XP_009385680.1| PREDICTED: U3 small nucleolar RNA-associated...   204   2e-58
emb|CBI19382.3| unnamed protein product, partial [Vitis vinifera]     197   4e-56
ref|XP_020702863.1| U3 small nucleolar RNA-associated protein 4 ...   196   1e-55
ref|XP_011074343.1| U3 small nucleolar RNA-associated protein 4 ...   192   6e-54
ref|XP_020104733.1| U3 small nucleolar RNA-associated protein 4-...   191   1e-53
ref|XP_013683961.1| U3 small nucleolar RNA-associated protein 4-...   190   3e-53
ref|XP_009109799.1| PREDICTED: U3 small nucleolar RNA-associated...   189   5e-53
ref|XP_013683988.1| U3 small nucleolar RNA-associated protein 4 ...   189   5e-53
gb|KFK28108.1| hypothetical protein AALP_AA8G473700 [Arabis alpina]   189   5e-53
ref|XP_009134077.1| PREDICTED: U3 small nucleolar RNA-associated...   189   7e-53
emb|CDY11793.1| BnaC03g57850D [Brassica napus]                        188   9e-53
ref|XP_013663223.1| U3 small nucleolar RNA-associated protein 4 ...   187   2e-52
ref|XP_013628887.1| PREDICTED: cirhin-like isoform X1 [Brassica ...   187   2e-52
ref|XP_002874481.1| U3 small nucleolar RNA-associated protein 4 ...   187   4e-52

>ref|XP_020276646.1| LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 4
           homolog [Asparagus officinalis]
          Length = 806

 Score =  231 bits (590), Expect = 1e-68
 Identities = 116/174 (66%), Positives = 126/174 (72%), Gaps = 19/174 (10%)
 Frame = -2

Query: 466 REDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRSRLLSSSMDGSVSEWDLFSLK 287
           REDGT+ELWLVSPGAVGWHC+LTIQGNP SR+SSL+WCRSRLLSSS+DGSVSEWDLFSL+
Sbjct: 28  REDGTLELWLVSPGAVGWHCELTIQGNPRSRLSSLIWCRSRLLSSSIDGSVSEWDLFSLQ 87

Query: 286 QKEVLDSVGVSIWQMAVEPFDDCSXXXXXXXXXXXXXXXDG------------------- 164
           QK VLDSVGVSIWQMA EP DDC                +                    
Sbjct: 88  QKIVLDSVGVSIWQMAAEPLDDCRDSKGNNSPHLANGHANSVAHSDSESSDSEDDTDLDE 147

Query: 163 PNTTCFGDNNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWSLN 2
           P T   G NNQRLAIACDDGCIR Y+VSDTDGLTY RSFPRVSGR LS+AWSL+
Sbjct: 148 PKTEILGKNNQRLAIACDDGCIRTYYVSDTDGLTYSRSFPRVSGRTLSVAWSLD 201


>ref|XP_020241419.1| U3 small nucleolar RNA-associated protein 4 homolog [Asparagus
           officinalis]
 gb|ONK79691.1| uncharacterized protein A4U43_C01F9060 [Asparagus officinalis]
          Length = 801

 Score =  228 bits (582), Expect = 1e-67
 Identities = 112/182 (61%), Positives = 132/182 (72%), Gaps = 18/182 (9%)
 Frame = -2

Query: 493 VDGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRSRLLSSSMDGSV 314
           VDGSKVAAAREDG+VELWLVSPG V WHC+LTI GNP SR+SSLVW  SRLLSSS+DGS+
Sbjct: 26  VDGSKVAAAREDGSVELWLVSPGTVDWHCELTIHGNPRSRISSLVWSGSRLLSSSIDGSI 85

Query: 313 SEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDCSXXXXXXXXXXXXXXXDGPNTTC----- 149
           SEWDLFSL+QK +LDSVGVSIWQM VEP DDC                +   + C     
Sbjct: 86  SEWDLFSLQQKTLLDSVGVSIWQMNVEPLDDCPHSKKINSHQMASGDANDLYSDCESGCT 145

Query: 148 -------------FGDNNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWS 8
                         G N+QR+A+ACDDGC+R+Y++SDT+GLTY+RSFPRVSGR+LS+AWS
Sbjct: 146 DDDYDLDESHTAYIGKNDQRVAVACDDGCVRLYYMSDTNGLTYYRSFPRVSGRILSVAWS 205

Query: 7   LN 2
            N
Sbjct: 206 FN 207


>ref|XP_008810458.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Phoenix dactylifera]
          Length = 817

 Score =  224 bits (571), Expect = 7e-66
 Identities = 116/190 (61%), Positives = 133/190 (70%), Gaps = 29/190 (15%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCR--------SRLLS 335
           DGS+VAAAREDG++E+WLVSPG+VGWHCQLTIQG+P+SRVSSLVWCR         RLLS
Sbjct: 27  DGSQVAAAREDGSLEIWLVSPGSVGWHCQLTIQGDPTSRVSSLVWCRPSSKSEGPGRLLS 86

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC--------------------- 218
           SS+DGS+SEWDLF L+QK VLDSVGVSIWQMA+EP DD                      
Sbjct: 87  SSIDGSISEWDLFGLQQKVVLDSVGVSIWQMAIEPSDDIVHSEKNESGLIANGYTNHGAH 146

Query: 217 SXXXXXXXXXXXXXXXDGPNTTCFGDNNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRV 38
           S               D P+    G NNQRLAIACDDGC+R+Y  SDTDGLTY+RSFPRV
Sbjct: 147 SDSESSRSDDDDDDDSDEPHAVPTGSNNQRLAIACDDGCVRLYSASDTDGLTYYRSFPRV 206

Query: 37  SGRVLSIAWS 8
           SGR+LS+AWS
Sbjct: 207 SGRILSVAWS 216


>ref|XP_010934832.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Elaeis guineensis]
          Length = 818

 Score =  221 bits (564), Expect = 7e-65
 Identities = 116/190 (61%), Positives = 134/190 (70%), Gaps = 29/190 (15%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLLS 335
           DGS+VAAAREDG++E+WLVSPG+VGWHCQLTIQG+P+SRVSSLVWCR+        RLLS
Sbjct: 27  DGSQVAAAREDGSLEIWLVSPGSVGWHCQLTIQGDPTSRVSSLVWCRAGSKSEGPGRLLS 86

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC--------------------- 218
           SS+DGS+SEWDLF L+QK VLDSVGVSIWQMAVEP DD                      
Sbjct: 87  SSIDGSISEWDLFGLQQKVVLDSVGVSIWQMAVEPSDDIVHSDKIDSGLIANGYTNLGAH 146

Query: 217 SXXXXXXXXXXXXXXXDGPNTTCFGDNNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRV 38
           S               D P+    G N QRLAIACDDGC+R+Y VSD+DGLTY+RSFPRV
Sbjct: 147 SDSESSQSDDDDDDDFDEPHAVPTGSNYQRLAIACDDGCVRLYNVSDSDGLTYYRSFPRV 206

Query: 37  SGRVLSIAWS 8
           SGR+LS+AWS
Sbjct: 207 SGRILSVAWS 216


>ref|XP_008778520.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           isoform X1 [Phoenix dactylifera]
          Length = 815

 Score =  210 bits (534), Expect = 1e-60
 Identities = 110/189 (58%), Positives = 126/189 (66%), Gaps = 28/189 (14%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCR--------SRLLS 335
           DGS+VAAAREDG++E+WLVSPG+VGWHCQLTIQG+P SRVSSLVWCR         RLLS
Sbjct: 27  DGSQVAAAREDGSLEIWLVSPGSVGWHCQLTIQGDPISRVSSLVWCRPSSKSGGPGRLLS 86

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDD--------------------CS 215
           SS+DGS+SEWDLF L+QK VLDSVGVSIWQMA+EP D                       
Sbjct: 87  SSIDGSISEWDLFGLQQKIVLDSVGVSIWQMAIEPSDSIVHLGKNDSGLIANGYESHGAH 146

Query: 214 XXXXXXXXXXXXXXXDGPNTTCFGDNNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVS 35
                          D P++     N QRLA+ACDDGCIR+Y   DTDGLTY RSFPRVS
Sbjct: 147 SDSESGQSDDDDDDSDEPHSAAIASNYQRLAVACDDGCIRLYNAFDTDGLTYIRSFPRVS 206

Query: 34  GRVLSIAWS 8
           GR+LS+ WS
Sbjct: 207 GRILSVTWS 215


>gb|OVA03965.1| WD40 repeat [Macleaya cordata]
          Length = 839

 Score =  207 bits (527), Expect = 2e-59
 Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 29/191 (15%)
 Frame = -2

Query: 493 VDGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLL 338
           +D S+VAAAREDG++E+WLVSPG+VGWHCQLTI G+P+SRVSSLVWCRS        RLL
Sbjct: 26  IDDSQVAAAREDGSLEIWLVSPGSVGWHCQLTIHGDPNSRVSSLVWCRSNSKTMPSGRLL 85

Query: 337 SSSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC-------SXXXXXXXXXXXX 179
           SSS+DGS+SEWDLF LKQK VLDS+GVSIWQMAVEPFDD        +            
Sbjct: 86  SSSIDGSISEWDLFHLKQKIVLDSIGVSIWQMAVEPFDDSLLSAQNDTQYAINGHASNKV 145

Query: 178 XXXDGPNTTCFGDNN--------------QRLAIACDDGCIRIYFVSDTDGLTYHRSFPR 41
                 +T+   D++                +AI CDDGC+R+Y VSD+DGLTY RS PR
Sbjct: 146 SPRSNDDTSESDDDDVDSVVLHVHPMVQTPHVAIGCDDGCVRVYIVSDSDGLTYSRSLPR 205

Query: 40  VSGRVLSIAWS 8
           VSGRVLS+AWS
Sbjct: 206 VSGRVLSVAWS 216


>ref|XP_009385680.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Musa acuminata subsp. malaccensis]
          Length = 806

 Score =  204 bits (518), Expect = 2e-58
 Identities = 106/190 (55%), Positives = 127/190 (66%), Gaps = 27/190 (14%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLLS 335
           DGS+VAAAREDG+VE+WLVSPG+VGWHCQLT+QG+PS R+SSLVWCRS        RLLS
Sbjct: 27  DGSQVAAAREDGSVEIWLVSPGSVGWHCQLTVQGDPSRRISSLVWCRSSSKSAGPGRLLS 86

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC----SXXXXXXXXXXXXXXXD 167
           S +DGS+SEWDL+SL +K  LDS+GVSIWQMAVEP  D                      
Sbjct: 87  SRIDGSISEWDLYSLNEKIALDSIGVSIWQMAVEPSVDSLQSEKTDSGLVPNGCTNHDGQ 146

Query: 166 GPNTTCFGD---------------NNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSG 32
             + +C  D               ++QRLA+ACDDGCIR+Y VSD DGLT  RSFPRVSG
Sbjct: 147 SDSESCLNDDDDESDELHTVASQTSSQRLAVACDDGCIRMYSVSDKDGLTCSRSFPRVSG 206

Query: 31  RVLSIAWSLN 2
           ++LS+ WS N
Sbjct: 207 QILSVTWSQN 216


>emb|CBI19382.3| unnamed protein product, partial [Vitis vinifera]
          Length = 740

 Score =  197 bits (500), Expect = 4e-56
 Identities = 104/192 (54%), Positives = 124/192 (64%), Gaps = 28/192 (14%)
 Frame = -2

Query: 493 VDGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLL 338
           VD S+VAAAREDG+VE+WLVSPG+VGWHCQLTI GNP+SRVSSLVWCRS        RL 
Sbjct: 24  VDDSQVAAAREDGSVEIWLVSPGSVGWHCQLTIHGNPNSRVSSLVWCRSGSKNMPSGRLF 83

Query: 337 SSSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDCSXXXXXXXXXXXXXXXDGPN 158
           SSS+DGSVSEWDLF LKQK VLDS+GVSIWQMA  P++D                 D  N
Sbjct: 84  SSSIDGSVSEWDLFDLKQKIVLDSIGVSIWQMAAAPYNDACLTQHELQHVGNGYLNDKLN 143

Query: 157 TTCFGD--------------------NNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRV 38
                D                     N R+A+ CDDGC+R+Y ++ +D LTY++S PRV
Sbjct: 144 NAEDEDKETSESEDDDSVELHEVSVFENPRVAMGCDDGCVRVYSITISDELTYNKSLPRV 203

Query: 37  SGRVLSIAWSLN 2
           SGR+LS+ WS N
Sbjct: 204 SGRILSVTWSPN 215


>ref|XP_020702863.1| U3 small nucleolar RNA-associated protein 4 homolog [Dendrobium
           catenatum]
 ref|XP_020702864.1| U3 small nucleolar RNA-associated protein 4 homolog [Dendrobium
           catenatum]
 gb|PKU85760.1| Guanine nucleotide-binding protein subunit beta-like protein B
           [Dendrobium catenatum]
          Length = 803

 Score =  196 bits (499), Expect = 1e-55
 Identities = 104/190 (54%), Positives = 124/190 (65%), Gaps = 27/190 (14%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWC--------RSRLLS 335
           DGS+VAAAREDG+VE+WLVSPG+VGWHCQLTI GN SSRVSS+VW         R RLLS
Sbjct: 27  DGSQVAAAREDGSVEIWLVSPGSVGWHCQLTIHGNHSSRVSSMVWLPFRSKGGGRGRLLS 86

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC-------------------SX 212
           SS+DGS+SEWD F+L+QK VLD++GVSIWQMA+EP DD                      
Sbjct: 87  SSIDGSISEWDFFTLQQKIVLDTIGVSIWQMALEPIDDSLHFGGKDLQLLPNGNTYQDGD 146

Query: 211 XXXXXXXXXXXXXXDGPNTTCFGDNNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSG 32
                            N    G+ N  LA+ACDDGC+R+Y V ++D LTY RSFPRVSG
Sbjct: 147 SNYESVDSDGDDDPTELNAATIGNKNLHLALACDDGCVRLYTVEESD-LTYKRSFPRVSG 205

Query: 31  RVLSIAWSLN 2
           R LS+AWSL+
Sbjct: 206 RTLSVAWSLD 215


>ref|XP_011074343.1| U3 small nucleolar RNA-associated protein 4 homolog isoform X1
           [Sesamum indicum]
          Length = 819

 Score =  192 bits (487), Expect = 6e-54
 Identities = 103/193 (53%), Positives = 126/193 (65%), Gaps = 32/193 (16%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLLS 335
           D S+VAAAR DG++E+WLVSPG+VGWH QLTI G+P+SRVSSLVWCRS        RLLS
Sbjct: 25  DSSQVAAARADGSLEIWLVSPGSVGWHRQLTIHGDPNSRVSSLVWCRSGPRGGPLGRLLS 84

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC---------SXXXXXXXXXXX 182
           SS+DGSVSEWDLF L+QK+VLDS+G+SIWQ+A EPF+D          S           
Sbjct: 85  SSIDGSVSEWDLFDLRQKKVLDSIGISIWQIAAEPFNDLLLDVKQEIKSYENGHANPSLT 144

Query: 181 XXXXDGPNTTCFGDNNQ---------------RLAIACDDGCIRIYFVSDTDGLTYHRSF 47
               +G N+    ++N                RLA+ACDDGC+RIY VSD + LTY R+ 
Sbjct: 145 SGVNEGENSESEDEDNDKNAVEILDHNDAKNTRLALACDDGCVRIYGVSDAEKLTYIRTL 204

Query: 46  PRVSGRVLSIAWS 8
           PRVSGR LS+ WS
Sbjct: 205 PRVSGRTLSVTWS 217


>ref|XP_020104733.1| U3 small nucleolar RNA-associated protein 4-like [Ananas comosus]
          Length = 809

 Score =  191 bits (485), Expect = 1e-53
 Identities = 98/181 (54%), Positives = 121/181 (66%), Gaps = 20/181 (11%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWC--------RSRLLS 335
           DGS+VAAAREDG +E+WLVSPG+VGWHCQL+IQG  +SR+SSLVWC          RLLS
Sbjct: 27  DGSQVAAAREDGALEIWLVSPGSVGWHCQLSIQGESASRISSLVWCGPSLEGSGLGRLLS 86

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDCSXXXXXXXXXXXXXXXDGPNT 155
           SS+ GS+SEWDLFSLK+K VL+S+G SIWQMA+EP  D                 +    
Sbjct: 87  SSIAGSISEWDLFSLKEKNVLNSIGGSIWQMALEPIHDTISSANGYSNSDAHSDTESSKI 146

Query: 154 TCFGDNN------------QRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAW 11
               D+N            QRLA+ACDDGC+R+Y  +++D LTY RSFPRVSGR+LS+ W
Sbjct: 147 DDDDDDNDELIAAHVHGKFQRLAVACDDGCVRLYNATESDELTYIRSFPRVSGRILSVVW 206

Query: 10  S 8
           S
Sbjct: 207 S 207


>ref|XP_013683961.1| U3 small nucleolar RNA-associated protein 4-like [Brassica napus]
          Length = 801

 Score =  190 bits (482), Expect = 3e-53
 Identities = 96/170 (56%), Positives = 118/170 (69%), Gaps = 9/170 (5%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLLS 335
           D ++VAAAREDG++E+WLVSPGAVGWHCQLTI G+P+SR+SSL WCR+        RL S
Sbjct: 24  DDTQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCRAGSQGLPSGRLFS 83

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDCSXXXXXXXXXXXXXXXDGPNT 155
           SS+DGS+SEWDLF LKQK VLDS+G+SIWQMAV P    S                    
Sbjct: 84  SSIDGSISEWDLFDLKQKVVLDSIGISIWQMAVSPTYLLSIDHRIEKEESESEDDSDSEE 143

Query: 154 TCFGDNNQR-LAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWS 8
               D++ R LA ACDDG +R+Y +SD++ LTY+RS PRVSGR LS+ WS
Sbjct: 144 EFHHDHSDRLLAAACDDGSVRLYRISDSNKLTYYRSLPRVSGRALSVTWS 193


>ref|XP_009109799.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog
           [Brassica rapa]
          Length = 792

 Score =  189 bits (480), Expect = 5e-53
 Identities = 95/172 (55%), Positives = 120/172 (69%), Gaps = 9/172 (5%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRSRLLSSSMDGSVS 311
           DGS+VAAAREDG++ELWLV PG+V WH QL I G+P SR+S LVW  +RL SSS+DG++S
Sbjct: 24  DGSQVAAAREDGSLELWLVPPGSVSWHSQLIIHGDPKSRISHLVWLGARLFSSSIDGTIS 83

Query: 310 EWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC-SXXXXXXXXXXXXXXXDGPNTTCFGDN- 137
           EWDLF LKQK VLDS+GVSIWQMAV P     +               +G +    G   
Sbjct: 84  EWDLFDLKQKVVLDSIGVSIWQMAVAPLSTAEAEMMVKKEYLSEESDDEGESGVEDGSEF 143

Query: 136 -------NQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWSLN 2
                  ++RLA+ACDDGC+R+Y+VSD++ LTY+RS PRVSGR LS+ WSL+
Sbjct: 144 DELEEKPDRRLAVACDDGCVRMYYVSDSEKLTYYRSLPRVSGRALSVTWSLD 195


>ref|XP_013683988.1| U3 small nucleolar RNA-associated protein 4 [Brassica napus]
 emb|CDY34019.1| BnaC03g27960D [Brassica napus]
          Length = 804

 Score =  189 bits (480), Expect = 5e-53
 Identities = 99/173 (57%), Positives = 122/173 (70%), Gaps = 12/173 (6%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLLS 335
           D ++VAAAREDG++E+WLVSPGAVGWHCQLTI G+P+SR+SSL WCR+        RL S
Sbjct: 24  DDTQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCRAGSQGLPSGRLFS 83

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEP--FDDCSXXXXXXXXXXXXXXXDGP 161
           SS+DGS+SEWDLF LKQK VLDS+G+SIWQMAV P   D+                 D  
Sbjct: 84  SSIDGSISEWDLFDLKQKAVLDSIGISIWQMAVSPTYIDNRIENGYSSEKEESEREDDSD 143

Query: 160 NTTCF-GDNNQR-LAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWS 8
           +   F  D++ R LA ACDDGC+R+Y +SD + LTY+RS PRVSGR LS+ WS
Sbjct: 144 SEEEFHHDHSDRLLAAACDDGCVRLYRISDFNKLTYYRSLPRVSGRALSVTWS 196


>gb|KFK28108.1| hypothetical protein AALP_AA8G473700 [Arabis alpina]
          Length = 808

 Score =  189 bits (480), Expect = 5e-53
 Identities = 98/178 (55%), Positives = 119/178 (66%), Gaps = 17/178 (9%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCR---------SRLL 338
           DGS+VAAAREDG++E+WLVSPGAV WHCQLTI G+  SR+S LVWCR         +RL 
Sbjct: 26  DGSQVAAAREDGSLEVWLVSPGAVSWHCQLTIHGDSKSRISYLVWCRASPKSSSSSARLF 85

Query: 337 SSSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDCSXXXXXXXXXXXXXXXDGPN 158
           SSS+DGS+SEWDLFSLKQK VLDS+ VSIWQ+A+ P    S               D   
Sbjct: 86  SSSIDGSISEWDLFSLKQKVVLDSINVSIWQIALAPLPSTSKEAELIPSGVLTEKLDDEE 145

Query: 157 TTCFGDN--------NQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWS 8
                D         ++RLA ACDDGC+RIY++S++  LTY+RS PRVSGRVLS+ WS
Sbjct: 146 DDSESDEVYEKTEALDRRLAAACDDGCVRIYYISESVKLTYYRSLPRVSGRVLSVTWS 203


>ref|XP_009134077.1| PREDICTED: U3 small nucleolar RNA-associated protein 4 [Brassica
           rapa]
          Length = 801

 Score =  189 bits (479), Expect = 7e-53
 Identities = 96/170 (56%), Positives = 117/170 (68%), Gaps = 9/170 (5%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLLS 335
           D ++VAAAREDG++E+WLVSPGAVGWHCQLTI G+P+SR+SSL WCR+        RL S
Sbjct: 24  DDTQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCRAGSQGLPSGRLFS 83

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDCSXXXXXXXXXXXXXXXDGPNT 155
           SS+DGS+SEWDLF LKQK VLDS+G+SIWQMAV P    S                    
Sbjct: 84  SSIDGSISEWDLFDLKQKVVLDSIGISIWQMAVSPTYLLSIDNRIEKEESESEDDSDSEE 143

Query: 154 TCFGDNNQR-LAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWS 8
               D++ R LA ACDDG +R+Y +SD + LTY+RS PRVSGR LS+ WS
Sbjct: 144 EFHHDHSDRLLAAACDDGSVRLYRISDFNKLTYYRSLPRVSGRALSVTWS 193


>emb|CDY11793.1| BnaC03g57850D [Brassica napus]
          Length = 793

 Score =  188 bits (478), Expect = 9e-53
 Identities = 93/172 (54%), Positives = 119/172 (69%), Gaps = 9/172 (5%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRSRLLSSSMDGSVS 311
           DGS+VAAAREDG++ELW+VSPG++ WHCQL I G+P SR+S L W  +RL SSS+DG++S
Sbjct: 24  DGSQVAAAREDGSLELWIVSPGSLSWHCQLIIHGDPKSRISHLAWLGARLFSSSIDGTIS 83

Query: 310 EWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC-SXXXXXXXXXXXXXXXDGPNTTCFGDN- 137
           EWDLF LKQK VLDS+GVSIWQMAV P     +               +G +    G   
Sbjct: 84  EWDLFDLKQKVVLDSIGVSIWQMAVAPLSTAEAEMMVKKEFSSEESDDEGESGVEDGSEF 143

Query: 136 -------NQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWSLN 2
                  ++RLA+ACDDGC+R+Y VSD++ LTY+RS PR SGR LS+ WSL+
Sbjct: 144 DELEEKPDRRLAVACDDGCVRMYHVSDSEKLTYYRSLPRASGRALSVTWSLD 195


>ref|XP_013663223.1| U3 small nucleolar RNA-associated protein 4 homolog [Brassica
           napus]
          Length = 792

 Score =  187 bits (476), Expect = 2e-52
 Identities = 95/172 (55%), Positives = 119/172 (69%), Gaps = 9/172 (5%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRSRLLSSSMDGSVS 311
           DGS+VAAAREDG++ELWLV PG+V WH QL I G+P SR+S LVW  +RL SSS+DG++S
Sbjct: 24  DGSQVAAAREDGSLELWLVPPGSVSWHSQLIIHGDPKSRISHLVWLGARLFSSSIDGTIS 83

Query: 310 EWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC-SXXXXXXXXXXXXXXXDGPNTTCFGDN- 137
           EWDLF LKQK VLDS+GVSIWQMAV P     +               +G +    G   
Sbjct: 84  EWDLFDLKQKVVLDSIGVSIWQMAVAPLSTAEAEMMVKKEYSSEESDEEGESGVEDGSEF 143

Query: 136 -------NQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWSLN 2
                  ++RLA+ACDDGC+R+Y VSD++ LTY+RS PRVSGR LS+ WSL+
Sbjct: 144 DELEEKPDRRLAVACDDGCVRMYHVSDSEKLTYYRSLPRVSGRALSVTWSLD 195


>ref|XP_013628887.1| PREDICTED: cirhin-like isoform X1 [Brassica oleracea var. oleracea]
 ref|XP_013628888.1| PREDICTED: cirhin-like isoform X2 [Brassica oleracea var. oleracea]
          Length = 792

 Score =  187 bits (476), Expect = 2e-52
 Identities = 92/172 (53%), Positives = 118/172 (68%), Gaps = 9/172 (5%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRSRLLSSSMDGSVS 311
           DGS+VAAAREDG++ELW+VSPG++ WHCQL I G+P SR+S L W  +RL SSS+DG++S
Sbjct: 24  DGSQVAAAREDGSLELWIVSPGSLSWHCQLIIHGDPKSRISHLAWLGARLFSSSIDGTIS 83

Query: 310 EWDLFSLKQKEVLDSVGVSIWQMAVEPFDDC-SXXXXXXXXXXXXXXXDGPNTTCFGDN- 137
           EWDLF LKQK VLDS+GVSIWQMAV P     +               +G +    G   
Sbjct: 84  EWDLFDLKQKVVLDSIGVSIWQMAVAPLSTAEAEMMVKKEFSSEESDDEGESGVADGSEF 143

Query: 136 -------NQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIAWSLN 2
                  ++RLA+ACDDGC+ +Y VSD++ LTY+RS PR SGR LS+ WSL+
Sbjct: 144 DELEEKPDRRLAVACDDGCVSMYHVSDSEKLTYYRSLPRASGRALSVTWSLD 195


>ref|XP_002874481.1| U3 small nucleolar RNA-associated protein 4 [Arabidopsis lyrata
           subsp. lyrata]
 gb|EFH50740.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 812

 Score =  187 bits (474), Expect = 4e-52
 Identities = 99/182 (54%), Positives = 120/182 (65%), Gaps = 21/182 (11%)
 Frame = -2

Query: 490 DGSKVAAAREDGTVELWLVSPGAVGWHCQLTIQGNPSSRVSSLVWCRS--------RLLS 335
           D S+VAAAREDG++E+WLVSPGAVGWHCQLTI G+P+SR+SSL WC S        RL S
Sbjct: 24  DDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCCSGSKGLPSGRLFS 83

Query: 334 SSMDGSVSEWDLFSLKQKEVLDSVGVSIWQMAVEPFDDCS-------XXXXXXXXXXXXX 176
           SS+DGS+SEWDLF LKQK VL+S+G SIWQMA+ P    S                    
Sbjct: 84  SSIDGSISEWDLFDLKQKIVLESIGFSIWQMALAPISVASIDVEGIKNGYSSENGEESGS 143

Query: 175 XXDGPNTTCF------GDNNQRLAIACDDGCIRIYFVSDTDGLTYHRSFPRVSGRVLSIA 14
             DG ++  F       D ++ LA ACDDGC+R+Y +SD D LTY+RS PRVSGR LS+ 
Sbjct: 144 EEDGSDSDEFHEQSDGSDTDRLLAAACDDGCVRLYRISDLDKLTYYRSLPRVSGRALSVT 203

Query: 13  WS 8
           WS
Sbjct: 204 WS 205