BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00019755
         (766 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma fa...   159   5e-42
ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,...   158   1e-41
ref|XP_008810822.1| PREDICTED: RNA polymerase sigma factor sigE,...   154   5e-40
gb|PIA34562.1| hypothetical protein AQUCO_03700091v1 [Aquilegia ...   151   6e-39
gb|PIA34563.1| hypothetical protein AQUCO_03700091v1 [Aquilegia ...   151   6e-39
ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,...   147   3e-37
gb|KRH53443.1| hypothetical protein GLYMA_06G125700 [Glycine max]     144   3e-37
gb|KCW90560.1| hypothetical protein EUGRSUZ_A026651, partial [Eu...   141   4e-37
ref|XP_018856010.1| PREDICTED: RNA polymerase sigma factor sigE,...   144   1e-36
gb|KCW90559.1| hypothetical protein EUGRSUZ_A026651, partial [Eu...   141   1e-36
ref|XP_018838242.1| PREDICTED: RNA polymerase sigma factor sigE,...   144   3e-36
dbj|BAM05478.1| sigma-like factor 5B [Glycine max]                    144   3e-36
ref|NP_001336364.1| RNA polymerase sigma factor sigE, chloroplas...   144   3e-36
ref|XP_018723512.1| PREDICTED: RNA polymerase sigma factor sigE,...   141   1e-35
gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata]             140   5e-35
ref|XP_021909213.1| RNA polymerase sigma factor sigE, chloroplas...   140   7e-35
ref|XP_022140941.1| RNA polymerase sigma factor sigE, chloroplas...   133   3e-32
ref|XP_019195124.1| PREDICTED: RNA polymerase sigma factor sigE,...   127   4e-30
gb|OWM79621.1| hypothetical protein CDL15_Pgr023033 [Punica gran...   127   4e-30
ref|XP_020672819.1| RNA polymerase sigma factor sigE, chloroplas...   125   5e-30

>ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Asparagus officinalis]
          Length = 478

 Score =  159 bits (401), Expect = 5e-42
 Identities = 117/263 (44%), Positives = 138/263 (52%), Gaps = 8/263 (3%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SASR+ATTSP+                                       IP
Sbjct: 1   MGVVTVSSSASRSATTSPLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----IP 55

Query: 585 LEQL--KQRRRPRKSNPTKAQTIKQQPNNELDYNEVAAALENIYKLSPAADVADAE---- 424
           L+Q   +QR+RP KS P K++    +P+ +LDYNEVAAALEN+YKLSP ADVA+ +    
Sbjct: 56  LDQQPKRQRKRPSKSKPNKSK----KPDADLDYNEVAAALENLYKLSPPADVAEEKKVEI 111

Query: 423 --VFDRKRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSEKDG 250
             V +RKRR    G E                                       S+K+ 
Sbjct: 112 DVVRNRKRRPKRLGLEKRVEAMRKRSREGEIGGGS--------------------SKKE- 150

Query: 249 XXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKENLH 70
                      EYSVST D+ SLDWR++KIPPVL S+E  RLFKLMQPMKAI EVKENLH
Sbjct: 151 -EEEEIDRLVREYSVST-DLGSLDWRRVKIPPVLGSAEHTRLFKLMQPMKAISEVKENLH 208

Query: 69  SDLNKEPAEGELAAAVNMTVPQL 1
            DLNKEP EGELAAAVNMTV +L
Sbjct: 209 KDLNKEPTEGELAAAVNMTVSEL 231


>ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Elaeis guineensis]
 ref|XP_010913942.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Elaeis guineensis]
          Length = 498

 Score =  158 bits (400), Expect = 1e-41
 Identities = 119/266 (44%), Positives = 141/266 (53%), Gaps = 11/266 (4%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRT-KCSAVAASQEPATI 589
           MGVV V  SAS+    +  RF +R   SP+  RP   +AF+TDR  KCSA A S E    
Sbjct: 1   MGVVIVPSSASQTPFGAGARFSARR--SPAFRRPFFCLAFRTDRAAKCSAAAVSSEAVKP 58

Query: 588 PLEQLKQRRRPRKSNPTKAQTIKQQPNNELDYNEVAAALENIYKLSPAADVADAEVFD-- 415
           P    K  +R + ++   A T  Q    +LDYNEVAAALENIYKLSPA +V+D E  D  
Sbjct: 59  PQ---KPPKRAQATSVDAAPTATQ----DLDYNEVAAALENIYKLSPA-EVSDVEETDQR 110

Query: 414 --------RKRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSE 259
                   RKR K+  G E                                        +
Sbjct: 111 GRRRRGRSRKRAKEGDGEEGNVVRNRKRRVRRLSLEKRIALRRRKDEEVEMVAARDERRD 170

Query: 258 KDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKE 79
            D            EYSVST D+ SLDW+KMKIPPVLSS+E   LF+LMQPMKAIFEVK 
Sbjct: 171 LD----EDVGKLLREYSVST-DLASLDWKKMKIPPVLSSAEHNWLFELMQPMKAIFEVKH 225

Query: 78  NLHSDLNKEPAEGELAAAVNMTVPQL 1
           NL+ DLN+EP + ELAAAVNMTVPQL
Sbjct: 226 NLNKDLNREPTDAELAAAVNMTVPQL 251


>ref|XP_008810822.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Phoenix dactylifera]
          Length = 498

 Score =  154 bits (388), Expect = 5e-40
 Identities = 113/266 (42%), Positives = 135/266 (50%), Gaps = 11/266 (4%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRT-KCSAVAASQEPATI 589
           MG VTV  SAS+    +  R  +R  P+P   RP   +AF+ D T KCSA A   E    
Sbjct: 1   MGAVTVPSSASQTPFGAGARLSARRLPAPR--RPFLCLAFRADWTAKCSAAAIPSEAVKP 58

Query: 588 PLEQLKQRRRPRKSNPTKAQTIKQQPNNELDYNEVAAALENIYKLSPAADVADAEVFDR- 412
           P +  K+ +      P  A         +LDYNEVAAALENIYKLSPA +V+D E  DR 
Sbjct: 59  PQKSSKRAQAASVDAPPTA-------TQDLDYNEVAAALENIYKLSPA-EVSDVEEADRR 110

Query: 411 ---------KRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSE 259
                    KR K+  G E                                        +
Sbjct: 111 GRRRRGRSRKRAKEGDGEEGNVVRNRKRRVRRLSLEKRIASRRRKDEEVEAAAARDERRD 170

Query: 258 KDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKE 79
            D            EYSVST D+ SLDW+KMKIPPVLSS+E  RLF+LMQPMKAIFEVK+
Sbjct: 171 LD----EDGEKLLREYSVST-DLASLDWKKMKIPPVLSSAEHNRLFELMQPMKAIFEVKK 225

Query: 78  NLHSDLNKEPAEGELAAAVNMTVPQL 1
           NL  DLN+EP + ELA AVNMTVP+L
Sbjct: 226 NLDKDLNREPTDAELAVAVNMTVPRL 251


>gb|PIA34562.1| hypothetical protein AQUCO_03700091v1 [Aquilegia coerulea]
          Length = 506

 Score =  151 bits (381), Expect = 6e-39
 Identities = 103/266 (38%), Positives = 140/266 (52%), Gaps = 11/266 (4%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS S SR    +P+ F SR   + S  +   ++AFKTD+++  +++ + EP  +P
Sbjct: 1   MGVVTVSSSTSR----TPLGFGSRFSTNRSLFKRPVVLAFKTDKSENISLSTAHEPVLLP 56

Query: 585 LEQLKQRRRPRKSNPT----KAQTIKQQPNNELDYNEVAAALENIYKLSPAADVADAE-- 424
            +   +++R +K+N      KA +  +    +LDY+E AA LENIYKLSPA D++D E  
Sbjct: 57  TKTHGEKKRLKKANKNSKRVKAVSADEICTTDLDYSEAAAKLENIYKLSPAKDISDIEDI 116

Query: 423 --VFDRKRRK---DLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSE 259
             V  R+RR    + G G+                                         
Sbjct: 117 VRVLRRRRRTSKVEKGNGQDEKEKSDDVVRSKKKRLGLDKRIALRMKGEGVVLSKGKEDN 176

Query: 258 KDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKE 79
           K G            YS ST ++VS+DW+KMKIPPVL SSE A LFKLMQPMK + +VKE
Sbjct: 177 KFGDEAVDRLVRE--YSTST-NLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKPLLQVKE 233

Query: 78  NLHSDLNKEPAEGELAAAVNMTVPQL 1
           +L  DL KEP +GELA A N  VPQL
Sbjct: 234 DLRKDLGKEPTDGELAVATNTNVPQL 259


>gb|PIA34563.1| hypothetical protein AQUCO_03700091v1 [Aquilegia coerulea]
          Length = 507

 Score =  151 bits (381), Expect = 6e-39
 Identities = 103/266 (38%), Positives = 140/266 (52%), Gaps = 11/266 (4%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS S SR    +P+ F SR   + S  +   ++AFKTD+++  +++ + EP  +P
Sbjct: 1   MGVVTVSSSTSR----TPLGFGSRFSTNRSLFKRPVVLAFKTDKSENISLSTAHEPVLLP 56

Query: 585 LEQLKQRRRPRKSNPT----KAQTIKQQPNNELDYNEVAAALENIYKLSPAADVADAE-- 424
            +   +++R +K+N      KA +  +    +LDY+E AA LENIYKLSPA D++D E  
Sbjct: 57  TKTHGEKKRLKKANKNSKRVKAVSADEICTTDLDYSEAAAKLENIYKLSPAKDISDIEDI 116

Query: 423 --VFDRKRRK---DLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSE 259
             V  R+RR    + G G+                                         
Sbjct: 117 VRVLRRRRRTSKVEKGNGQDEKEKSDDVVRSKKKRLGLDKRIALRMKGEGVVLSKGKEDN 176

Query: 258 KDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFEVKE 79
           K G            YS ST ++VS+DW+KMKIPPVL SSE A LFKLMQPMK + +VKE
Sbjct: 177 KFGDEAVDRLVRE--YSTST-NLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKPLLQVKE 233

Query: 78  NLHSDLNKEPAEGELAAAVNMTVPQL 1
           +L  DL KEP +GELA A N  VPQL
Sbjct: 234 DLRKDLGKEPTDGELAVATNTNVPQL 259


>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  147 bits (370), Expect = 3e-37
 Identities = 105/275 (38%), Positives = 141/275 (51%), Gaps = 20/275 (7%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS S+S+    +P+   SR     + ++   I+AFKTD+ K  A+    EP  +P
Sbjct: 1   MGVVTVSSSSSQ----TPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLP 56

Query: 585 LEQLK--QRRRPRKSNPTKAQTI-----KQQPNNELDYNEVAAALENIYKLSPAADVADA 427
           ++  K  Q+R  R + P+K   +           E+DYN+VAA LE+IYKLSP  DV+D 
Sbjct: 57  MDTPKENQKRLRRATKPSKRVKVVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDV 116

Query: 426 EVFDR------KRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGF 265
           +  DR      + RK LG  +                                       
Sbjct: 117 DDTDRVGRRRRRTRKKLGEADRKTGKESSDNVIRNHNKNKRLSLDRRIALRRKKEEGAVQ 176

Query: 264 -------SEKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQP 106
                  S++DG            YSVST D+ SLDW+KMKIPPVL SSE A LFKLMQP
Sbjct: 177 LSGVKEGSKEDGDVDKLVGE----YSVST-DLASLDWKKMKIPPVLPSSEHAWLFKLMQP 231

Query: 105 MKAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           M A+F++KENLH DL +EP +GELA + NM+V Q+
Sbjct: 232 MNALFQMKENLHRDLGREPTDGELADSTNMSVFQV 266


>gb|KRH53443.1| hypothetical protein GLYMA_06G125700 [Glycine max]
          Length = 370

 Score =  144 bits (362), Expect = 3e-37
 Identities = 100/269 (37%), Positives = 134/269 (49%), Gaps = 14/269 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SA+R       +F +     P       IVAFK D+   SA+ A+QE   +P
Sbjct: 1   MGVVTVSSSAARTPLGLNTKFCNNRLKRPL------IVAFKGDKHNDSALVATQEKIPVP 54

Query: 585 LEQLKQRRRPRKSNPTKAQTIKQQPNN-ELDYNEVAAALENIYKLSPAADVADA------ 427
           +E  K+ ++ R     K    +  P++ ++DYNE AA LEN+YKLSPA+D A+       
Sbjct: 55  VETAKKTQKKRIGKTNKLPKRESSPSSMDVDYNEAAAMLENLYKLSPASDNAECIDGKIK 114

Query: 426 -------EVFDRKRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 268
                  +V D    K+L G                                        
Sbjct: 115 RVSRRGKKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRK-- 172

Query: 267 FSEKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFE 88
                G           EYSVST D VS+DW++M+IPPVLSSSE A LFKLMQPMKA+ +
Sbjct: 173 -KRNVGNKIEKIEELIREYSVST-DFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQ 230

Query: 87  VKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           VKE+L  +L +EPA+GELA A NM++ Q+
Sbjct: 231 VKEDLQQELTREPADGELADATNMSITQV 259


>gb|KCW90560.1| hypothetical protein EUGRSUZ_A026651, partial [Eucalyptus grandis]
          Length = 282

 Score =  141 bits (356), Expect = 4e-37
 Identities = 101/270 (37%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVT+S SASR    +P+ F ++   S S  +   I+AF+ D+   +A+    E    P
Sbjct: 1   MGVVTISSSASR----TPLGFNAKFSTSRSATKRPLIIAFRADKNNKTALLTHHEQTYYP 56

Query: 585 LE----QLKQRRRPRKSNPTKAQTIKQQPNN-ELDYNEVAAALENIYKLSPAADVA---- 433
           +E    Q K+++  RK +     T +  P+  E+DYN+ AA LENIYKL+PAA+      
Sbjct: 57  VETNKEQQKKQKNARKPSRKAVCTDEISPSTLEVDYNDAAAKLENIYKLTPAAETCYGAN 116

Query: 432 -DAEVFDRKRR----KDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 268
            D  V  R+RR    KD+  GE                                      
Sbjct: 117 VDHGVRRRRRRTKKTKDVDKGEESKTSKRVVRTRKRNTKRLSLDGRITIKRRKEEQATYS 176

Query: 267 FSEKDGXXXXXXXXXXXEYSVS-TTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIF 91
              K                 S +TD+VSLDW+KMKIPPVL S+E A LFKLMQPMKA+ 
Sbjct: 177 VQRKREVLSEEEKIEKLVRDYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALL 236

Query: 90  EVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           +VKENL SDL++EP + E+A A NM+V QL
Sbjct: 237 QVKENLRSDLDREPIDAEMAEATNMSVAQL 266


>ref|XP_018856010.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like, partial [Juglans
           regia]
          Length = 458

 Score =  144 bits (363), Expect = 1e-36
 Identities = 101/273 (36%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SASR      ++F S+     S ++   IVAFK D++  +A+  SQE   +P
Sbjct: 1   MGVVTVSSSASRTPVGLGMKFSSQR----STLKRPLIVAFKADKSNTTALVTSQEQIPLP 56

Query: 585 LEQLKQRRRPRKSNPTKAQTIKQQPNNE-------LDYNEVAAALENIYKLSPAADVADA 427
           +E  K  ++       K + +K    +E       +DYNE AA LEN+YKL+PAAD ++ 
Sbjct: 57  IETGKDHQKRLGKANKKLRRVKAVLTDEASPCALEVDYNEAAAKLENLYKLTPAADASNE 116

Query: 426 EVFDR-------KRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 268
           E  D        +RRK  G  E                                      
Sbjct: 117 ENIDGMVRKIRGRRRKTTGVDEKLVEKKASDNVIKNQTDKVKRLSLDKRIALKKNKQDEV 176

Query: 267 FS----EKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMK 100
            +     KD                ++TD+VSLDW+KMKIPPVL SSE A LFKLMQPMK
Sbjct: 177 VAPKRKRKDSTDESAKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMK 236

Query: 99  AIFEVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           A+ +VKENL  DL KEP EGELA A ++   Q+
Sbjct: 237 ALLQVKENLQKDLGKEPTEGELAEATDIKAVQI 269


>gb|KCW90559.1| hypothetical protein EUGRSUZ_A026651, partial [Eucalyptus grandis]
          Length = 344

 Score =  141 bits (356), Expect = 1e-36
 Identities = 101/270 (37%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVT+S SASR    +P+ F ++   S S  +   I+AF+ D+   +A+    E    P
Sbjct: 63  MGVVTISSSASR----TPLGFNAKFSTSRSATKRPLIIAFRADKNNKTALLTHHEQTYYP 118

Query: 585 LE----QLKQRRRPRKSNPTKAQTIKQQPNN-ELDYNEVAAALENIYKLSPAADVA---- 433
           +E    Q K+++  RK +     T +  P+  E+DYN+ AA LENIYKL+PAA+      
Sbjct: 119 VETNKEQQKKQKNARKPSRKAVCTDEISPSTLEVDYNDAAAKLENIYKLTPAAETCYGAN 178

Query: 432 -DAEVFDRKRR----KDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 268
            D  V  R+RR    KD+  GE                                      
Sbjct: 179 VDHGVRRRRRRTKKTKDVDKGEESKTSKRVVRTRKRNTKRLSLDGRITIKRRKEEQATYS 238

Query: 267 FSEKDGXXXXXXXXXXXEYSVS-TTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIF 91
              K                 S +TD+VSLDW+KMKIPPVL S+E A LFKLMQPMKA+ 
Sbjct: 239 VQRKREVLSEEEKIEKLVRDYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALL 298

Query: 90  EVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           +VKENL SDL++EP + E+A A NM+V QL
Sbjct: 299 QVKENLRSDLDREPIDAEMAEATNMSVAQL 328


>ref|XP_018838242.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Juglans regia]
 ref|XP_018838243.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Juglans regia]
 ref|XP_018838244.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Juglans regia]
          Length = 517

 Score =  144 bits (363), Expect = 3e-36
 Identities = 101/273 (36%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SASR      ++F S+     S ++   IVAFK D++  +A+  SQE   +P
Sbjct: 1   MGVVTVSSSASRTPVGLGMKFSSQR----STLKRPLIVAFKADKSNTTALVTSQEQIPLP 56

Query: 585 LEQLKQRRRPRKSNPTKAQTIKQQPNNE-------LDYNEVAAALENIYKLSPAADVADA 427
           +E  K  ++       K + +K    +E       +DYNE AA LEN+YKL+PAAD ++ 
Sbjct: 57  IETGKDHQKRLGKANKKLRRVKAVLTDEASPCALEVDYNEAAAKLENLYKLTPAADASNE 116

Query: 426 EVFDR-------KRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 268
           E  D        +RRK  G  E                                      
Sbjct: 117 ENIDGMVRKIRGRRRKTTGVDEKLVEKKASDNVIKNQTDKVKRLSLDKRIALKKNKQDEV 176

Query: 267 FS----EKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMK 100
            +     KD                ++TD+VSLDW+KMKIPPVL SSE A LFKLMQPMK
Sbjct: 177 VAPKRKRKDSTDESAKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMK 236

Query: 99  AIFEVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           A+ +VKENL  DL KEP EGELA A ++   Q+
Sbjct: 237 ALLQVKENLQKDLGKEPTEGELAEATDIKAVQI 269


>dbj|BAM05478.1| sigma-like factor 5B [Glycine max]
          Length = 507

 Score =  144 bits (362), Expect = 3e-36
 Identities = 100/269 (37%), Positives = 134/269 (49%), Gaps = 14/269 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SA+R       +F +     P       IVAFK D+   SA+ A+QE   +P
Sbjct: 1   MGVVTVSSSAARTPLGLNTKFCNNRLKRPL------IVAFKGDKHNDSALVATQEKIPVP 54

Query: 585 LEQLKQRRRPRKSNPTKAQTIKQQPNN-ELDYNEVAAALENIYKLSPAADVADA------ 427
           +E  K+ ++ R     K    +  P++ ++DYNE AA LEN+YKLSPA+D A+       
Sbjct: 55  VETAKKTQKKRIGKTNKLPKRESSPSSMDVDYNEAAAMLENLYKLSPASDNAECIDGKIK 114

Query: 426 -------EVFDRKRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 268
                  +V D    K+L G                                        
Sbjct: 115 RVSRRGKKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRK-- 172

Query: 267 FSEKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFE 88
                G           EYSVST D VS+DW++M+IPPVLSSSE A LFKLMQPMKA+ +
Sbjct: 173 -KRNVGNKIEKIEELIREYSVST-DFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQ 230

Query: 87  VKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           VKE+L  +L +EPA+GELA A NM++ Q+
Sbjct: 231 VKEDLQQELTREPADGELADATNMSITQV 259


>ref|NP_001336364.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Glycine max]
 ref|NP_001276145.2| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Glycine max]
 gb|KHN23396.1| RNA polymerase sigma factor rpoD [Glycine soja]
 gb|KRH53441.1| hypothetical protein GLYMA_06G125700 [Glycine max]
 gb|KRH53442.1| hypothetical protein GLYMA_06G125700 [Glycine max]
          Length = 507

 Score =  144 bits (362), Expect = 3e-36
 Identities = 100/269 (37%), Positives = 134/269 (49%), Gaps = 14/269 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SA+R       +F +     P       IVAFK D+   SA+ A+QE   +P
Sbjct: 1   MGVVTVSSSAARTPLGLNTKFCNNRLKRPL------IVAFKGDKHNDSALVATQEKIPVP 54

Query: 585 LEQLKQRRRPRKSNPTKAQTIKQQPNN-ELDYNEVAAALENIYKLSPAADVADA------ 427
           +E  K+ ++ R     K    +  P++ ++DYNE AA LEN+YKLSPA+D A+       
Sbjct: 55  VETAKKTQKKRIGKTNKLPKRESSPSSMDVDYNEAAAMLENLYKLSPASDNAECIDGKIK 114

Query: 426 -------EVFDRKRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 268
                  +V D    K+L G                                        
Sbjct: 115 RVSRRGKKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRK-- 172

Query: 267 FSEKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIFE 88
                G           EYSVST D VS+DW++M+IPPVLSSSE A LFKLMQPMKA+ +
Sbjct: 173 -KRNVGNKIEKIEELIREYSVST-DFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQ 230

Query: 87  VKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           VKE+L  +L +EPA+GELA A NM++ Q+
Sbjct: 231 VKEDLQQELTREPADGELADATNMSITQV 259


>ref|XP_018723512.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Eucalyptus grandis]
          Length = 472

 Score =  141 bits (356), Expect = 1e-35
 Identities = 101/270 (37%), Positives = 136/270 (50%), Gaps = 15/270 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVT+S SASR    +P+ F ++   S S  +   I+AF+ D+   +A+    E    P
Sbjct: 1   MGVVTISSSASR----TPLGFNAKFSTSRSATKRPLIIAFRADKNNKTALLTHHEQTYYP 56

Query: 585 LE----QLKQRRRPRKSNPTKAQTIKQQPNN-ELDYNEVAAALENIYKLSPAADVA---- 433
           +E    Q K+++  RK +     T +  P+  E+DYN+ AA LENIYKL+PAA+      
Sbjct: 57  VETNKEQQKKQKNARKPSRKAVCTDEISPSTLEVDYNDAAAKLENIYKLTPAAETCYGAN 116

Query: 432 -DAEVFDRKRR----KDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 268
            D  V  R+RR    KD+  GE                                      
Sbjct: 117 VDHGVRRRRRRTKKTKDVDKGEESKTSKRVVRTRKRNTKRLSLDGRITIKRRKEEQATYS 176

Query: 267 FSEKDGXXXXXXXXXXXEYSVS-TTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIF 91
              K                 S +TD+VSLDW+KMKIPPVL S+E A LFKLMQPMKA+ 
Sbjct: 177 VQRKREVLSEEEKIEKLVRDYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALL 236

Query: 90  EVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           +VKENL SDL++EP + E+A A NM+V QL
Sbjct: 237 QVKENLRSDLDREPIDAEMAEATNMSVAQL 266


>gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata]
          Length = 513

 Score =  140 bits (354), Expect = 5e-35
 Identities = 106/270 (39%), Positives = 134/270 (49%), Gaps = 15/270 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQE----P 598
           MGVVTVS S S+      VRF S   P    ++   ++AFK+D+TK +A+ A+QE    P
Sbjct: 1   MGVVTVSSSTSQTPLGLNVRFSSHRSP----LKRTLVLAFKSDKTKNTALVATQESIQLP 56

Query: 597 ATIPLEQLKQRRRPRKSNPTKAQTIKQQPNNELD--YNEVAAALENIYKLSPAADVADAE 424
              P EQ + RR    S   KA +  +     LD  Y E AA LENIYKL+   D +D E
Sbjct: 57  RDAPNEQKRLRRATESSKRVKAVSTDEPSPCALDLYYREAAAKLENIYKLNCPTDGSDVE 116

Query: 423 -----VFDRKRRKDLG--GGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGF 265
                V  R+R K +   G +                                       
Sbjct: 117 DDYPVVRRRRRVKKVNKHGEKATKEASWKVVRSQKKMKRLGLDERIAVRRKEKEEITLSQ 176

Query: 264 SEKDGXXXXXXXXXXXE--YSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIF 91
            ++DG              YSVST D+VSLDW+KMKIP VL SSE   LFKLMQPMK + 
Sbjct: 177 GKEDGKMKGGDDVERLVREYSVST-DLVSLDWKKMKIPSVLPSSEHTWLFKLMQPMKVLL 235

Query: 90  EVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           +VKENLH D N+EP +GELAAA NM+V Q+
Sbjct: 236 QVKENLHKDFNREPTDGELAAATNMSVIQV 265


>ref|XP_021909213.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Carica papaya]
 ref|XP_021909214.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Carica papaya]
          Length = 517

 Score =  140 bits (353), Expect = 7e-35
 Identities = 102/274 (37%), Positives = 141/274 (51%), Gaps = 19/274 (6%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPA-SIVAFKTDRTKCSAVAASQEPATI 589
           MGVVTVS SA+R    SP+  + +   + SG R   SIVAFK D++  +A+   QE   +
Sbjct: 1   MGVVTVSSSAAR----SPLGLIKKLSSNHSGSRSRPSIVAFKADKSNSTALILPQEQILL 56

Query: 588 PLEQ-LKQRRRPRKSNPTKAQTIKQQPNNE-------LDYNEVAAALENIYKLSPA---A 442
           P+E   KQ++R RKS+    + +K    +E       +DYNE AA LE+IYKLSP+   +
Sbjct: 57  PVEAPKKQQKRLRKSSKV-LKNVKAVSTDEASPCILDVDYNEAAAKLESIYKLSPSTKTS 115

Query: 441 DVADAEVF---DRKRRKDLGG----GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 283
           DV D +     +R+RR+ + G     +                                 
Sbjct: 116 DVGDVDSMPRRERRRRRRISGDDDKADNEIGSFVVRNPAKRAKRLSLDKRIALGRDKNER 175

Query: 282 XXXXGFSEKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPM 103
                + + D                ++TD+VSLDW+KMKIPPVLSS+E A LFKLMQPM
Sbjct: 176 KVAAFWKKSDRKNENEKIEELVREYSASTDLVSLDWKKMKIPPVLSSTEHAWLFKLMQPM 235

Query: 102 KAIFEVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           KA+ +VKE L  +L  EP EGELA A NM + Q+
Sbjct: 236 KALLQVKEELEKNLGHEPTEGELAKATNMNIVQV 269


>ref|XP_022140941.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Momordica charantia]
 ref|XP_022140943.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Momordica charantia]
          Length = 509

 Score =  133 bits (334), Expect = 3e-32
 Identities = 96/271 (35%), Positives = 134/271 (49%), Gaps = 16/271 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SA+R    +P+R  ++     S ++  +IVAFK D+   + + +  E  T+P
Sbjct: 1   MGVVTVSSSAAR----TPLRLGAKFSNHNSTLKRPTIVAFKADKHTNTTLVSPHEQVTLP 56

Query: 585 LEQLKQRRRPRKSNPTKAQ-------TIKQQP-NNELDYNEVAAALENIYKLSPAADVAD 430
           +E    R + R    +K+        T +  P  +E+DYNE AA LENI+ LSP  D  D
Sbjct: 57  VES-NNRTKKRSGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTD 115

Query: 429 AEVFD--------RKRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 274
            E  D        R+++ D   G+                                    
Sbjct: 116 VESKDGRLRSGQQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKK- 174

Query: 273 XGFSEKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAI 94
               ++             +YS ST D+VSLDW+KMKIPPVL SSE  RLFKL+QPMKA+
Sbjct: 175 ---QKETKNEADEIDDLVRDYSAST-DLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKAL 230

Query: 93  FEVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
            +V+E+L  +L +EP EGELA A NM V Q+
Sbjct: 231 IQVQEDLQKELGREPTEGELANATNMNVVQV 261


>ref|XP_019195124.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X2 [Ipomoea
           nil]
          Length = 506

 Score =  127 bits (319), Expect = 4e-30
 Identities = 101/272 (37%), Positives = 140/272 (51%), Gaps = 17/272 (6%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SA+R+      RF +R  P    ++   I++FKTD+TK +A+ + +E  ++ 
Sbjct: 1   MGVVTVSSSAARSLRGFNNRFSARLCP----LKGPFILSFKTDKTKNAALVSPKESESLL 56

Query: 585 LEQLK--QRRRPRKSNPTKA-------QTIKQQPNN-ELDYNEVAAALENIYKLSPAADV 436
           ++  K  ++R  + S+   A        T +  P+  ELDYNE AA LE +YK SP  + 
Sbjct: 57  IQYSKDDEKRLGQASSKLSAGRVCGVISTDEASPSTIELDYNEAAAKLEKLYKSSP--ET 114

Query: 435 ADAEVF-DRKRRKDLG-GGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFS 262
            D  V   R RRK +G G E                                       S
Sbjct: 115 GDRTVKRGRGRRKRIGEGNEEAEKENIIRNPKKKAKRLSLDKRITLRRKKEGELLVASIS 174

Query: 261 EKDGXXXXXXXXXXXE-----YSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKA 97
           +K             +     YS+ T ++V+LDW+KMKIPPVLSSSE + LFKLMQPMKA
Sbjct: 175 QKQQHREATTNDEKIDMLVREYSIGT-NLVTLDWKKMKIPPVLSSSEHSWLFKLMQPMKA 233

Query: 96  IFEVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           IF+VKENL +DL +EP + E+A A N+ V QL
Sbjct: 234 IFQVKENLQNDLGREPTDVEIAEATNIDVVQL 265


>gb|OWM79621.1| hypothetical protein CDL15_Pgr023033 [Punica granatum]
 gb|PKI72417.1| hypothetical protein CRG98_007163 [Punica granatum]
          Length = 514

 Score =  127 bits (319), Expect = 4e-30
 Identities = 97/270 (35%), Positives = 132/270 (48%), Gaps = 15/270 (5%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPSPSGVRPASIVAFKTDRTKCSAVAASQEPATIP 586
           MGVVTVS SAS       V F S+   S S V+   IVAF+ ++   +A+   Q+    P
Sbjct: 1   MGVVTVSSSASGTL----VGFNSKFSTSKSVVKRPLIVAFRGEKNNSTALLTHQDQTHSP 56

Query: 585 LEQLKQRRRP----RKSNPTKAQTIKQQPNN-ELDYNEVAAALENIYKLSPAADVADAEV 421
           +E  K++++      KS+     T +  P   ELDY + AA LE+IYKL+   + +DAE 
Sbjct: 57  VETSKKQKKKVGNGSKSSRKAVLTDEVSPCTLELDYYDAAAKLEDIYKLTSTPNTSDAEE 116

Query: 420 FD-------RKRRKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFS 262
                    ++R+K   G E                                       S
Sbjct: 117 VTGEKKRGRQRRKKTAEGDEEENDEVGQTVVRNRTKKAKRLSLDRRIALKNNKDEKPVAS 176

Query: 261 E---KDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKAIF 91
           E   KD                ++TD+VSLDW+KMKIPPVL S+E A LFKLMQPMKA+F
Sbjct: 177 EQKKKDVKSEDEKIERLVRDYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALF 236

Query: 90  EVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           EV+ENL + L ++PA+ ELA A  MTV Q+
Sbjct: 237 EVRENLRAGLGRQPADAELADATKMTVAQV 266


>ref|XP_020672819.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           isoform X2 [Dendrobium catenatum]
          Length = 421

 Score =  125 bits (315), Expect = 5e-30
 Identities = 103/272 (37%), Positives = 132/272 (48%), Gaps = 17/272 (6%)
 Frame = -2

Query: 765 MGVVTVSCSASRAATTSPVRFVSRHRPS---PSGVRPASIVAFKTDRTKCSAVAASQEPA 595
           MGVVTVS + SR   TSP+   S +      P   RP SIVAFK           S +P 
Sbjct: 1   MGVVTVSSTPSR---TSPLGIGSGYSAGWSHPLRRRPVSIVAFK-----------SSDPN 46

Query: 594 TI-PLEQLKQRRRPRKSNPTKAQTIKQQPNN---ELDYNEVAAALENIYKLSPAADVADA 427
            + PL   K R++P+++     ++    P+    ++DY+EVA ALENIYKLSP A+V+D 
Sbjct: 47  LVKPLT--KSRKQPKRTQSVSLESASASPSLSTVDVDYSEVAEALENIYKLSP-AEVSDM 103

Query: 426 EVFD---------RKR-RKDLGGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 277
           E FD         RKR ++ + G E                                   
Sbjct: 104 E-FDFNLGRGGHTRKRVKQSVEGEEGIVINGKRRMRRLSLDARIALRRTRKEEGDVFARD 162

Query: 276 XXGFSEKDGXXXXXXXXXXXEYSVSTTDVVSLDWRKMKIPPVLSSSEQARLFKLMQPMKA 97
                  +G                + D+VSLDWRKMKIPPVLS +E   LFKLMQP K 
Sbjct: 163 GVRKRATEGEMEEVELDKLLREYSVSIDLVSLDWRKMKIPPVLSFAEHKWLFKLMQPTKG 222

Query: 96  IFEVKENLHSDLNKEPAEGELAAAVNMTVPQL 1
           I +VKENLH DL++EP  GELA AVNM V +L
Sbjct: 223 ILKVKENLHGDLSREPTNGELAEAVNMNVKKL 254