BLASTX nr result
ID: Ophiopogon27_contig00019633
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00019633
(468 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022869021.1| DNA repair helicase XPB1-like [Olea europaea... 75 3e-14
ref|XP_020245551.1| DNA repair helicase XPB1-like [Asparagus off... 79 3e-14
ref|XP_020270225.1| DNA repair helicase XPB1 isoform X3 [Asparag... 79 3e-14
gb|ONK57484.1| uncharacterized protein A4U43_C09F980 [Asparagus ... 79 3e-14
ref|XP_020270223.1| DNA repair helicase XPB1 isoform X2 [Asparag... 79 3e-14
gb|PIN19680.1| RNA polymerase II transcription initiation [Handr... 79 3e-14
ref|XP_020270221.1| DNA repair helicase XPB1 isoform X1 [Asparag... 79 3e-14
ref|XP_011080928.1| DNA repair helicase XPB1 [Sesamum indicum] 79 4e-14
ref|XP_022890888.1| DNA repair helicase XPB1 isoform X4 [Olea eu... 78 8e-14
ref|XP_022890887.1| DNA repair helicase XPB1 isoform X3 [Olea eu... 78 8e-14
ref|XP_022890886.1| DNA repair helicase XPB1 isoform X2 [Olea eu... 78 8e-14
ref|XP_022890884.1| DNA repair helicase XPB1 isoform X1 [Olea eu... 78 8e-14
gb|KJB20625.1| hypothetical protein B456_003G156900 [Gossypium r... 78 1e-13
gb|KJB20626.1| hypothetical protein B456_003G156900 [Gossypium r... 78 1e-13
gb|KJB20624.1| hypothetical protein B456_003G156900 [Gossypium r... 78 1e-13
ref|XP_023881498.1| general transcription and DNA repair factor ... 78 1e-13
ref|XP_012471790.1| PREDICTED: DNA repair helicase XPB1-like iso... 78 1e-13
ref|XP_017642312.1| PREDICTED: DNA repair helicase XPB1 [Gossypi... 78 1e-13
ref|XP_016716142.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h... 78 1e-13
ref|XP_012471789.1| PREDICTED: DNA repair helicase XPB1-like iso... 78 1e-13
>ref|XP_022869021.1| DNA repair helicase XPB1-like [Olea europaea var. sylvestris]
Length = 124
Score = 74.7 bits (182), Expect = 3e-14
Identities = 41/65 (63%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG-KKGHGQAKNKPKDPAKRHHL 292
EQLEED D IALQK MVYMEY+TG KK HGQAK+K KDPAKRHHL
Sbjct: 59 EQLEEDTDGIALQKARRSAGSMSAMSGASGMVYMEYSTGQKKQHGQAKSKFKDPAKRHHL 118
Query: 291 FRKRF 277
F+KRF
Sbjct: 119 FKKRF 123
>ref|XP_020245551.1| DNA repair helicase XPB1-like [Asparagus officinalis]
Length = 639
Score = 79.3 bits (194), Expect = 3e-14
Identities = 44/66 (66%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG--KKGHGQAKNKPKDPAKRHH 295
EQLEEDADDIALQK MVYMEYNTG KKGHG K+KPKDPAKRHH
Sbjct: 573 EQLEEDADDIALQKARRSAGSMSALSGASGMVYMEYNTGQGKKGHG--KSKPKDPAKRHH 630
Query: 294 LFRKRF 277
LFRKR+
Sbjct: 631 LFRKRY 636
>ref|XP_020270225.1| DNA repair helicase XPB1 isoform X3 [Asparagus officinalis]
Length = 667
Score = 79.3 bits (194), Expect = 3e-14
Identities = 44/66 (66%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG--KKGHGQAKNKPKDPAKRHH 295
EQLEEDADDIALQK MVYMEYNTG KKGHG K+KPKDPAKRHH
Sbjct: 601 EQLEEDADDIALQKARRSVGSMSALSGASGMVYMEYNTGQGKKGHG--KSKPKDPAKRHH 658
Query: 294 LFRKRF 277
LFRKR+
Sbjct: 659 LFRKRY 664
>gb|ONK57484.1| uncharacterized protein A4U43_C09F980 [Asparagus officinalis]
Length = 689
Score = 79.3 bits (194), Expect = 3e-14
Identities = 44/66 (66%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG--KKGHGQAKNKPKDPAKRHH 295
EQLEEDADDIALQK MVYMEYNTG KKGHG K+KPKDPAKRHH
Sbjct: 623 EQLEEDADDIALQKARRSAGSMSALSGASGMVYMEYNTGQGKKGHG--KSKPKDPAKRHH 680
Query: 294 LFRKRF 277
LFRKR+
Sbjct: 681 LFRKRY 686
>ref|XP_020270223.1| DNA repair helicase XPB1 isoform X2 [Asparagus officinalis]
ref|XP_020270224.1| DNA repair helicase XPB1 isoform X2 [Asparagus officinalis]
Length = 765
Score = 79.3 bits (194), Expect = 3e-14
Identities = 44/66 (66%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG--KKGHGQAKNKPKDPAKRHH 295
EQLEEDADDIALQK MVYMEYNTG KKGHG K+KPKDPAKRHH
Sbjct: 699 EQLEEDADDIALQKARRSVGSMSALSGASGMVYMEYNTGQGKKGHG--KSKPKDPAKRHH 756
Query: 294 LFRKRF 277
LFRKR+
Sbjct: 757 LFRKRY 762
>gb|PIN19680.1| RNA polymerase II transcription initiation [Handroanthus
impetiginosus]
Length = 766
Score = 79.3 bits (194), Expect = 3e-14
Identities = 42/65 (64%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG-KKGHGQAKNKPKDPAKRHHL 292
EQLEEDADDIALQK MVYMEY TG KK HGQ K+KPKDP+KRHHL
Sbjct: 701 EQLEEDADDIALQKARRSVGSMSAMSGASGMVYMEYGTGQKKLHGQTKSKPKDPSKRHHL 760
Query: 291 FRKRF 277
F+KRF
Sbjct: 761 FKKRF 765
>ref|XP_020270221.1| DNA repair helicase XPB1 isoform X1 [Asparagus officinalis]
ref|XP_020270222.1| DNA repair helicase XPB1 isoform X1 [Asparagus officinalis]
gb|ONK66043.1| uncharacterized protein A4U43_C06F3580 [Asparagus officinalis]
Length = 766
Score = 79.3 bits (194), Expect = 3e-14
Identities = 44/66 (66%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG--KKGHGQAKNKPKDPAKRHH 295
EQLEEDADDIALQK MVYMEYNTG KKGHG K+KPKDPAKRHH
Sbjct: 700 EQLEEDADDIALQKARRSVGSMSALSGASGMVYMEYNTGQGKKGHG--KSKPKDPAKRHH 757
Query: 294 LFRKRF 277
LFRKR+
Sbjct: 758 LFRKRY 763
>ref|XP_011080928.1| DNA repair helicase XPB1 [Sesamum indicum]
Length = 766
Score = 79.0 bits (193), Expect = 4e-14
Identities = 42/65 (64%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTG-KKGHGQAKNKPKDPAKRHHL 292
EQLEEDADDIALQK MVYMEY+TG KK HGQ K+KPKDP KRHHL
Sbjct: 701 EQLEEDADDIALQKARRSAGSMSAMSGASGMVYMEYSTGQKKPHGQMKSKPKDPNKRHHL 760
Query: 291 FRKRF 277
F+KRF
Sbjct: 761 FKKRF 765
>ref|XP_022890888.1| DNA repair helicase XPB1 isoform X4 [Olea europaea var. sylvestris]
Length = 667
Score = 78.2 bits (191), Expect = 8e-14
Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKKG-HGQAKNKPKDPAKRHHL 292
E+LEEDADDIALQK MVYMEYNTG+K HGQ K+KPKDPAKRH L
Sbjct: 601 ERLEEDADDIALQKARRSGGSMSAMSGASGMVYMEYNTGQKNVHGQTKSKPKDPAKRHQL 660
Query: 291 FRKRF 277
F+KRF
Sbjct: 661 FKKRF 665
>ref|XP_022890887.1| DNA repair helicase XPB1 isoform X3 [Olea europaea var. sylvestris]
Length = 740
Score = 78.2 bits (191), Expect = 8e-14
Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKKG-HGQAKNKPKDPAKRHHL 292
E+LEEDADDIALQK MVYMEYNTG+K HGQ K+KPKDPAKRH L
Sbjct: 674 ERLEEDADDIALQKARRSGGSMSAMSGASGMVYMEYNTGQKNVHGQTKSKPKDPAKRHQL 733
Query: 291 FRKRF 277
F+KRF
Sbjct: 734 FKKRF 738
>ref|XP_022890886.1| DNA repair helicase XPB1 isoform X2 [Olea europaea var. sylvestris]
Length = 766
Score = 78.2 bits (191), Expect = 8e-14
Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKKG-HGQAKNKPKDPAKRHHL 292
E+LEEDADDIALQK MVYMEYNTG+K HGQ K+KPKDPAKRH L
Sbjct: 700 ERLEEDADDIALQKARRSGGSMSAMSGASGMVYMEYNTGQKNVHGQTKSKPKDPAKRHQL 759
Query: 291 FRKRF 277
F+KRF
Sbjct: 760 FKKRF 764
>ref|XP_022890884.1| DNA repair helicase XPB1 isoform X1 [Olea europaea var. sylvestris]
ref|XP_022890885.1| DNA repair helicase XPB1 isoform X1 [Olea europaea var. sylvestris]
Length = 768
Score = 78.2 bits (191), Expect = 8e-14
Identities = 41/65 (63%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKKG-HGQAKNKPKDPAKRHHL 292
E+LEEDADDIALQK MVYMEYNTG+K HGQ K+KPKDPAKRH L
Sbjct: 702 ERLEEDADDIALQKARRSGGSMSAMSGASGMVYMEYNTGQKNVHGQTKSKPKDPAKRHQL 761
Query: 291 FRKRF 277
F+KRF
Sbjct: 762 FKKRF 766
>gb|KJB20625.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 497
Score = 77.8 bits (190), Expect = 1e-13
Identities = 41/67 (61%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKK---GHGQAKNKPKDPAKRH 298
EQLEEDADDIAL K MVYMEY+TGK GHGQ K+KPKDP+KRH
Sbjct: 430 EQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRH 489
Query: 297 HLFRKRF 277
HLF+KRF
Sbjct: 490 HLFKKRF 496
>gb|KJB20626.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 724
Score = 77.8 bits (190), Expect = 1e-13
Identities = 41/67 (61%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKK---GHGQAKNKPKDPAKRH 298
EQLEEDADDIAL K MVYMEY+TGK GHGQ K+KPKDP+KRH
Sbjct: 657 EQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRH 716
Query: 297 HLFRKRF 277
HLF+KRF
Sbjct: 717 HLFKKRF 723
>gb|KJB20624.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 747
Score = 77.8 bits (190), Expect = 1e-13
Identities = 41/67 (61%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKK---GHGQAKNKPKDPAKRH 298
EQLEEDADDIAL K MVYMEY+TGK GHGQ K+KPKDP+KRH
Sbjct: 680 EQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRH 739
Query: 297 HLFRKRF 277
HLF+KRF
Sbjct: 740 HLFKKRF 746
>ref|XP_023881498.1| general transcription and DNA repair factor IIH helicase subunit
XPB1-like [Quercus suber]
Length = 764
Score = 77.8 bits (190), Expect = 1e-13
Identities = 39/64 (60%), Positives = 43/64 (67%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKKGHGQAKNKPKDPAKRHHLF 289
EQLEEDADDIAL K MVYMEY+TG+K GQ K KPKDPAKRHHLF
Sbjct: 700 EQLEEDADDIALHKARRFMGSMSAMSGANGMVYMEYSTGRKMQGQLKGKPKDPAKRHHLF 759
Query: 288 RKRF 277
++RF
Sbjct: 760 KRRF 763
>ref|XP_012471790.1| PREDICTED: DNA repair helicase XPB1-like isoform X3 [Gossypium
raimondii]
Length = 768
Score = 77.8 bits (190), Expect = 1e-13
Identities = 41/67 (61%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKK---GHGQAKNKPKDPAKRH 298
EQLEEDADDIAL K MVYMEY+TGK GHGQ K+KPKDP+KRH
Sbjct: 701 EQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRH 760
Query: 297 HLFRKRF 277
HLF+KRF
Sbjct: 761 HLFKKRF 767
>ref|XP_017642312.1| PREDICTED: DNA repair helicase XPB1 [Gossypium arboreum]
Length = 770
Score = 77.8 bits (190), Expect = 1e-13
Identities = 41/67 (61%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKK---GHGQAKNKPKDPAKRH 298
EQLEEDADDIAL K MVYMEY+TGK GHGQ K+KPKDP+KRH
Sbjct: 703 EQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRH 762
Query: 297 HLFRKRF 277
HLF+KRF
Sbjct: 763 HLFKKRF 769
>ref|XP_016716142.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase XPB1-like
[Gossypium hirsutum]
Length = 770
Score = 77.8 bits (190), Expect = 1e-13
Identities = 41/67 (61%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKK---GHGQAKNKPKDPAKRH 298
EQLEEDADDIAL K MVYMEY+TGK GHGQ K+KPKDP+KRH
Sbjct: 703 EQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRH 762
Query: 297 HLFRKRF 277
HLF+KRF
Sbjct: 763 HLFKKRF 769
>ref|XP_012471789.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Gossypium
raimondii]
gb|KJB20623.1| hypothetical protein B456_003G156900 [Gossypium raimondii]
Length = 770
Score = 77.8 bits (190), Expect = 1e-13
Identities = 41/67 (61%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Frame = -1
Query: 468 EQLEEDADDIALQKXXXXXXXXXXXXXXXXMVYMEYNTGKK---GHGQAKNKPKDPAKRH 298
EQLEEDADDIAL K MVYMEY+TGK GHGQ K+KPKDP+KRH
Sbjct: 703 EQLEEDADDIALHKARRSMGSMSAMSGANGMVYMEYSTGKHKLMGHGQNKSKPKDPSKRH 762
Query: 297 HLFRKRF 277
HLF+KRF
Sbjct: 763 HLFKKRF 769