BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00019494
         (363 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OBS70119.1| hypothetical protein A6R68_01337 [Neotoma lepida]       53   7e-06

>gb|OBS70119.1| hypothetical protein A6R68_01337 [Neotoma lepida]
          Length = 211

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 8/117 (6%)
 Frame = +2

Query: 35  VVGARMGTVMKRIAMKADIGIVMMAGQ------EIVIEIVMKADTEMRIE-VGLEE-REI 190
           VVGA + T +  +  + ++G+VM+  +      +I +E+VM  +TE+ +  VG+EE   +
Sbjct: 9   VVGAEVETEVATV--ETEVGVVMVETEVGVAMVQIEVEVVM-VETEVEVAMVGIEEVAMV 65

Query: 191 GVPGMMKDMEKAAIRTTETEIVMVETLMNAMEEIVIEMMTTGDAAVMTTSLVQEAGA 361
           G+  +M ++E AA+   ETE+VMVET   AMEEI   M  T +A  +T   ++E  A
Sbjct: 66  GIEVVMVEIEVAAME--ETEVVMVETEGVAMEEIEAAMEVTEEAMEVTEEAMEETEA 120