BLASTX nr result
ID: Ophiopogon27_contig00019416
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00019416
(571 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK61029.1| uncharacterized protein A4U43_C08F25350 [Asparagu... 181 7e-55
ref|XP_020259043.1| uncharacterized protein LOC109835477 [Aspara... 185 8e-54
ref|XP_020266818.1| uncharacterized protein LOC109842338 [Aspara... 187 2e-53
ref|XP_020262691.1| uncharacterized protein LOC109838678 [Aspara... 191 5e-53
dbj|GAV84963.1| hypothetical protein CFOL_v3_28404, partial [Cep... 172 1e-51
ref|XP_020266186.1| uncharacterized protein LOC109841648 [Aspara... 186 3e-51
gb|AMQ13099.1| RNase H, partial [Crocus sativus] 167 3e-50
ref|XP_019104866.1| PREDICTED: uncharacterized protein LOC109134... 173 1e-49
emb|CBL94133.1| putative polyprotein (retrotransposon protein) [... 172 2e-49
gb|PNX70480.1| retrotransposon-related protein, partial [Trifoli... 167 5e-49
gb|PON54551.1| Ribonuclease H-like domain containing protein, pa... 166 9e-49
gb|AAL76005.1|AF466646_13 putative polyprotein [Zea mays] 170 2e-48
gb|OMO58913.1| reverse transcriptase [Corchorus capsularis] 170 2e-48
emb|CAA73042.1| polyprotein, partial [Ananas comosus] 168 2e-48
gb|PON68450.1| Ribonuclease H-like domain containing protein [Pa... 167 2e-48
gb|AIA19160.1| RNase H, partial [uncultured bacterium] 165 2e-48
gb|PKA59558.1| hypothetical protein AXF42_Ash018025 [Apostasia s... 166 3e-48
gb|AAQ56518.1| putative polyprotein [Oryza sativa Japonica Group] 169 5e-48
gb|OMO91869.1| reverse transcriptase [Corchorus capsularis] 168 7e-48
gb|OMO55593.1| reverse transcriptase [Corchorus capsularis] 167 7e-48
>gb|ONK61029.1| uncharacterized protein A4U43_C08F25350 [Asparagus officinalis]
Length = 488
Score = 181 bits (458), Expect(2) = 7e-55
Identities = 83/102 (81%), Positives = 94/102 (92%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVL Q GHV+AYASRQLK+HE+NYPTHDLELAAVIFALK+WRHYLLG++V ++TDHKS K
Sbjct: 290 CVLQQDGHVVAYASRQLKKHEQNYPTHDLELAAVIFALKLWRHYLLGEQVNVFTDHKSLK 349
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSR 308
YIFTQ ELN+R+ RWLELMADYD+DLQYH GKVNVVPD LSR
Sbjct: 350 YIFTQKELNIRQPRWLELMADYDIDLQYHLGKVNVVPDALSR 391
Score = 61.2 bits (147), Expect(2) = 7e-55
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 313 RESMFLQITQQKKLLKEMRELDLIVVCRVTVAERLMTIQVKPTLIERIKEAQSSDPKLQQ 492
R S + +T Q KL +E+R++ + V+ A LM +Q++ TLIERIK AQ+ DP LQ+
Sbjct: 391 RLSTIMTLTAQWKLQQEVRDMSIEVLLPGVTAS-LMNLQIQSTLIERIKVAQAGDPFLQK 449
Query: 493 FREQVEANLRFDFQIH-PSRLYYGDKI 570
+RE V A L+ +F +H L +G++I
Sbjct: 450 YRELVVAGLQSEFVVHEDGSLRFGNRI 476
>ref|XP_020259043.1| uncharacterized protein LOC109835477 [Asparagus officinalis]
Length = 1189
Score = 185 bits (469), Expect(2) = 8e-54
Identities = 83/102 (81%), Positives = 95/102 (93%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVL Q GHV+ YASRQLK+HE+NYPTHDLELAAVIFALK+WRHYLLG++V ++TDHKS K
Sbjct: 793 CVLQQDGHVVVYASRQLKKHEQNYPTHDLELAAVIFALKLWRHYLLGEQVKVFTDHKSLK 852
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSR 308
Y+FTQ ELNMR+RRWLELMADY++DLQYHPGKVNVVPD LSR
Sbjct: 853 YLFTQKELNMRQRRWLELMADYNIDLQYHPGKVNVVPDALSR 894
Score = 53.5 bits (127), Expect(2) = 8e-54
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 328 LQITQQKKLLKEMRELDLIVVCRVTVAERLMTIQVKPTLIERIKEAQSSDPKLQQFREQV 507
+ +T Q +L +E+R++ + V+ A LM +Q++ TLI+R+K AQ+ DP LQ+ RE
Sbjct: 899 MTLTAQWRLQQEVRDMSIEVLLPGVTAS-LMNLQIQSTLIKRLKAAQAGDPFLQKCRELA 957
Query: 508 EANLRFDFQIH-PSRLYYGDKI 570
A LR +F IH L +G +I
Sbjct: 958 VAGLRPEFVIHEDGSLRFGSRI 979
>ref|XP_020266818.1| uncharacterized protein LOC109842338 [Asparagus officinalis]
Length = 540
Score = 187 bits (475), Expect = 2e-53
Identities = 85/104 (81%), Positives = 97/104 (93%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVL Q GHV+AYASRQLK+HE+NYPTHDLELAAVIFALK+WR+YLLG++V ++TDHKS K
Sbjct: 383 CVLQQDGHVVAYASRQLKKHEQNYPTHDLELAAVIFALKLWRYYLLGEQVKVFTDHKSLK 442
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRP 314
YIFTQ ELNMR+RRWLEL+ADYD+DLQYHPGKVNVVPD LSR P
Sbjct: 443 YIFTQKELNMRQRRWLELIADYDIDLQYHPGKVNVVPDALSRLP 486
>ref|XP_020262691.1| uncharacterized protein LOC109838678 [Asparagus officinalis]
Length = 905
Score = 191 bits (485), Expect = 5e-53
Identities = 87/104 (83%), Positives = 97/104 (93%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVL Q GHV+AYASRQLK+HE+NYPTHDLELAAVIFALK+WRHYLLG++V ++TDHKS K
Sbjct: 791 CVLQQDGHVVAYASRQLKKHEQNYPTHDLELAAVIFALKLWRHYLLGEQVKVFTDHKSLK 850
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRP 314
YIFTQ ELNMR+RRWLELMADYD+DLQYHPGKVNVVPD LSR P
Sbjct: 851 YIFTQKELNMRQRRWLELMADYDIDLQYHPGKVNVVPDALSRLP 894
>dbj|GAV84963.1| hypothetical protein CFOL_v3_28404, partial [Cephalotus
follicularis]
Length = 148
Score = 172 bits (435), Expect = 1e-51
Identities = 84/121 (69%), Positives = 95/121 (78%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ G VIAYASRQLK HE+NYPTHDLELAAVIFALKIWRHYL G + I+TDHKS K
Sbjct: 28 CVLMQQGKVIAYASRQLKTHEQNYPTHDLELAAVIFALKIWRHYLYGAKCEIFTDHKSLK 87
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRPREHVFADHSAEETSER 362
YIFTQ ELNMR+RRWLEL+ DYD +QYHPGK NVV D LSR+ ++ + +E R
Sbjct: 88 YIFTQKELNMRQRRWLELIKDYDCTIQYHPGKANVVADALSRKSMGNLAMMITTQEDLIR 147
Query: 363 D 365
D
Sbjct: 148 D 148
>ref|XP_020266186.1| uncharacterized protein LOC109841648 [Asparagus officinalis]
Length = 1038
Score = 186 bits (473), Expect = 3e-51
Identities = 84/104 (80%), Positives = 96/104 (92%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVL Q GHV+AYASRQLK+HE+NYPTHDLELAAVIF+LK+WRHYLLG++V ++TDHKS K
Sbjct: 888 CVLQQDGHVVAYASRQLKKHEQNYPTHDLELAAVIFSLKLWRHYLLGEQVKVFTDHKSLK 947
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRP 314
YIFTQ ELNMR+RRWLELM DY++DLQYHPGKVNVVPD LSR P
Sbjct: 948 YIFTQKELNMRQRRWLELMVDYNIDLQYHPGKVNVVPDALSRLP 991
>gb|AMQ13099.1| RNase H, partial [Crocus sativus]
Length = 104
Score = 167 bits (422), Expect = 3e-50
Identities = 76/101 (75%), Positives = 87/101 (86%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQHG VIAYASR L+ HE NYPTHDLELAAV+ ALK+WRHYL G+RV ++TDHKS K
Sbjct: 4 CVLMQHGKVIAYASRGLRVHEVNYPTHDLELAAVVHALKLWRHYLYGERVEVFTDHKSLK 63
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLS 305
YIFTQ ELNMR+RRWLE + D+D+D+QYHPGK NVV D LS
Sbjct: 64 YIFTQKELNMRQRRWLEFLKDFDLDMQYHPGKANVVADALS 104
>ref|XP_019104866.1| PREDICTED: uncharacterized protein LOC109134912 [Beta vulgaris
subsp. vulgaris]
Length = 355
Score = 173 bits (439), Expect = 1e-49
Identities = 77/108 (71%), Positives = 90/108 (83%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQHG VIAYASR L+ HE+NYP HDLELAAV+FALK+WRHYL G ++TDHKS K
Sbjct: 194 CVLMQHGKVIAYASRHLRPHEKNYPVHDLELAAVVFALKLWRHYLCGVSCKVFTDHKSLK 253
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRPREHV 326
YIFTQ ++NMR+RRWLEL+ DYD+D+QYHPGK N V D LSRRPR +
Sbjct: 254 YIFTQKDMNMRQRRWLELLKDYDIDIQYHPGKTNKVADALSRRPRSEL 301
>emb|CBL94133.1| putative polyprotein (retrotransposon protein) [Malus domestica]
Length = 362
Score = 172 bits (437), Expect = 2e-49
Identities = 75/105 (71%), Positives = 93/105 (88%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQH VIAYASRQLK HERNYPTHDLELAA++FALKIWRHYL G++ I+TDHKS +
Sbjct: 99 CVLMQHSRVIAYASRQLKTHERNYPTHDLELAAIVFALKIWRHYLYGEKCKIFTDHKSLQ 158
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRPR 317
Y+FTQ++LN+R+RRWLEL++DYD ++YHPG+ NVV D LSR+P+
Sbjct: 159 YLFTQHDLNLRQRRWLELLSDYDCTIEYHPGRANVVADALSRKPQ 203
>gb|PNX70480.1| retrotransposon-related protein, partial [Trifolium pratense]
Length = 219
Score = 167 bits (424), Expect = 5e-49
Identities = 76/103 (73%), Positives = 89/103 (86%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQHG VIAYASRQLK+HE+NYPTHDLE+AAVIFALKIWRHYL G+ + IYTDHKS +
Sbjct: 58 CVLMQHGKVIAYASRQLKRHEQNYPTHDLEMAAVIFALKIWRHYLYGETLEIYTDHKSLQ 117
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRR 311
YIF Q +LN+R+RRW+EL+ DYD + YHPGK NVV D LSR+
Sbjct: 118 YIFKQRDLNLRQRRWMELLKDYDCTILYHPGKANVVADALSRK 160
>gb|PON54551.1| Ribonuclease H-like domain containing protein, partial [Parasponia
andersonii]
Length = 197
Score = 166 bits (420), Expect = 9e-49
Identities = 74/103 (71%), Positives = 88/103 (85%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ+G ++AYASRQLK++E+ YPTHDLELAAV+FALKIWRHYL G+R IYTDHKS K
Sbjct: 66 CVLMQNGKIVAYASRQLKEYEKKYPTHDLELAAVVFALKIWRHYLYGERCQIYTDHKSLK 125
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRR 311
Y FTQ ELNMR+R+WLEL+ DYD ++ YHPGK NVV D SR+
Sbjct: 126 YFFTQKELNMRQRKWLELVKDYDCEINYHPGKANVVADAQSRK 168
>gb|AAL76005.1|AF466646_13 putative polyprotein [Zea mays]
Length = 343
Score = 170 bits (430), Expect = 2e-48
Identities = 81/122 (66%), Positives = 97/122 (79%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ GHVIAY SRQL++HE NYPTHDLELAAV+ ALKIWRHY++G + +YTDHKS K
Sbjct: 139 CVLMQEGHVIAYVSRQLRKHELNYPTHDLELAAVVHALKIWRHYIMGTKCQVYTDHKSLK 198
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRPREHVFADHSAEETSER 362
YIFTQ +LN+R+RRWLEL+ DYD+++ YHPGK N+V D LSR +EHV HSA
Sbjct: 199 YIFTQKDLNLRQRRWLELIKDYDLEIHYHPGKANLVADALSR--KEHV---HSAIVAQLP 253
Query: 363 DE 368
DE
Sbjct: 254 DE 255
>gb|OMO58913.1| reverse transcriptase [Corchorus capsularis]
Length = 1477
Score = 170 bits (430), Expect(2) = 2e-48
Identities = 77/103 (74%), Positives = 90/103 (87%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ+G V+AYASRQLK +ERNYPTHDLELAAV+FALKIWRHYL G++ I+TDHKS K
Sbjct: 909 CVLMQNGKVVAYASRQLKPYERNYPTHDLELAAVVFALKIWRHYLYGEKCEIFTDHKSLK 968
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRR 311
YIFTQ E+NMR+RRWLEL+ DYD+ + YHPGK NVV D LSR+
Sbjct: 969 YIFTQKEINMRQRRWLELLKDYDLTISYHPGKANVVADALSRK 1011
Score = 50.4 bits (119), Expect(2) = 2e-48
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 334 ITQQKKLLKEMRELDLIVVCRVTVAERLMTIQVKPTLIERIKEAQSSDPKLQQFREQVEA 513
+T Q+ +L ++R ++ I V + + L +++++P LIERIKEAQ D LQ+ R +E
Sbjct: 1020 LTSQRSILDDLRRME-IGVRKHGIEGMLASLRIQPMLIERIKEAQLVDSALQKVRANIET 1078
Query: 514 NLRFDFQIH-PSRLYYGDKI 570
DF+ H L +GD++
Sbjct: 1079 GAPSDFRTHDDGSLRFGDRL 1098
>emb|CAA73042.1| polyprotein, partial [Ananas comosus]
Length = 871
Score = 168 bits (426), Expect(2) = 2e-48
Identities = 76/108 (70%), Positives = 92/108 (85%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ VIAYASRQLK++E+NYPTHDLELAAV+FALK+WRHYL G+R +YTDHKS K
Sbjct: 326 CVLMQDDKVIAYASRQLKEYEKNYPTHDLELAAVVFALKLWRHYLYGERCEVYTDHKSLK 385
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRPREHV 326
Y+FTQ ELN+R+RRWLEL+ DYD+ + YHPGK NVV D LSR+ E++
Sbjct: 386 YLFTQKELNLRQRRWLELLKDYDLTILYHPGKANVVADALSRKSMENL 433
Score = 52.0 bits (123), Expect(2) = 2e-48
Identities = 27/74 (36%), Positives = 49/74 (66%)
Frame = +1
Query: 316 ESMFLQITQQKKLLKEMRELDLIVVCRVTVAERLMTIQVKPTLIERIKEAQSSDPKLQQF 495
E++ + + Q +L+++M+ L+L +V T RLMT+ V+PTL++RIKE Q+SD +LQ+
Sbjct: 431 ENLAMHVVTQPRLIEQMKRLELEIVTPDTPM-RLMTLVVQPTLLDRIKEKQASDVELQKI 489
Query: 496 REQVEANLRFDFQI 537
+ ++ DF +
Sbjct: 490 KGKMVDGCTGDFTL 503
>gb|PON68450.1| Ribonuclease H-like domain containing protein [Parasponia
andersonii]
Length = 265
Score = 167 bits (423), Expect = 2e-48
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ+G VIAYASRQLK+ E+ YPTHDLELAAV+FALKIWRHYL G+R IYTDHKS K
Sbjct: 143 CVLMQNGKVIAYASRQLKECEKKYPTHDLELAAVVFALKIWRHYLYGERCKIYTDHKSLK 202
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRP 314
Y FTQ ELNMR+RRWLEL+ DYD ++ YH GK NVV D LSR+P
Sbjct: 203 YFFTQKELNMRQRRWLELVKDYDCEINYHLGKANVVADALSRKP 246
>gb|AIA19160.1| RNase H, partial [uncultured bacterium]
Length = 206
Score = 165 bits (418), Expect = 2e-48
Identities = 75/103 (72%), Positives = 88/103 (85%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ G V+AY+SRQLK HE+NYPTHDLELAAV+ ALK WRHYL G + IYTDHKS K
Sbjct: 102 CVLMQEGRVVAYSSRQLKIHEKNYPTHDLELAAVVHALKTWRHYLYGQKCDIYTDHKSLK 161
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRR 311
YIFTQ+ELNMR+RRWLEL+ DY++++ YHPGK NVV D LSR+
Sbjct: 162 YIFTQSELNMRQRRWLELIKDYELEIHYHPGKANVVADALSRK 204
>gb|PKA59558.1| hypothetical protein AXF42_Ash018025 [Apostasia shenzhenica]
Length = 220
Score = 166 bits (419), Expect = 3e-48
Identities = 82/134 (61%), Positives = 98/134 (73%), Gaps = 4/134 (2%)
Frame = +3
Query: 12 MQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPKYIF 191
MQ G VIAYASRQLK HE NYPTHDLELAAVIFALKIWRHYL + I+TDHKS KYIF
Sbjct: 1 MQSGKVIAYASRQLKNHEVNYPTHDLELAAVIFALKIWRHYLYRTKCEIFTDHKSLKYIF 60
Query: 192 TQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRRPREHVFADHSA----EETSE 359
TQ ELN+R+RRWLEL+ DYDVD+QYHPGK N+V D L+R+ + + A E +
Sbjct: 61 TQKELNLRQRRWLELLKDYDVDIQYHPGKANIVADALNRKSASNTLTNQEALIKEIEQLQ 120
Query: 360 RDERIGFDSRVQSY 401
+ RI D R+ ++
Sbjct: 121 LETRISDDKRMVAH 134
>gb|AAQ56518.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 345
Score = 169 bits (427), Expect = 5e-48
Identities = 76/103 (73%), Positives = 89/103 (86%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
C+LMQ GHV+AYASRQL+ HE NYPTHDLELA V+ ALKIWRHYL+G+R IYTDHKS K
Sbjct: 56 CMLMQEGHVVAYASRQLRPHEGNYPTHDLELAIVVHALKIWRHYLIGNRCEIYTDHKSLK 115
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRR 311
YIFTQ++LN+R+RRWLEL+ DYDV + YHPGK NVV D LSR+
Sbjct: 116 YIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRK 158
>gb|OMO91869.1| reverse transcriptase [Corchorus capsularis]
Length = 1401
Score = 168 bits (426), Expect(2) = 7e-48
Identities = 78/103 (75%), Positives = 88/103 (85%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ G VIAYASRQLK +E+NYPTHDLELAAV+FALKIWRHYL G+ IYTDHKS K
Sbjct: 844 CVLMQDGRVIAYASRQLKPYEQNYPTHDLELAAVVFALKIWRHYLYGESCEIYTDHKSLK 903
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRR 311
Y+FTQ ELNMR+RRWLEL+ DYD+ + YHPGK NVV D LSR+
Sbjct: 904 YLFTQKELNMRQRRWLELIKDYDLSINYHPGKANVVVDALSRK 946
Score = 50.1 bits (118), Expect(2) = 7e-48
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 319 SMFLQITQQKKLLKEMRELDLIVVCRVTVAERLMTIQVKPTLIERIKEAQSSDPKLQQFR 498
SM IT Q++LL+E+ + VV + L ++ V+P+LIERIK AQ D +L + +
Sbjct: 950 SMAALITTQRRLLEELDGEQIEVVMQGE-GVLLASLVVQPSLIERIKVAQKDDLELCRIK 1008
Query: 499 EQVEANLRFDFQIH-PSRLYYGDKI 570
E VE L+ DF IH L +G ++
Sbjct: 1009 EDVENGLKTDFNIHIDGTLQFGSRL 1033
>gb|OMO55593.1| reverse transcriptase [Corchorus capsularis]
Length = 1385
Score = 167 bits (422), Expect(2) = 7e-48
Identities = 76/103 (73%), Positives = 89/103 (86%)
Frame = +3
Query: 3 CVLMQHGHVIAYASRQLKQHERNYPTHDLELAAVIFALKIWRHYLLGDRVLIYTDHKSPK 182
CVLMQ+ V+AYASRQLK +ERNYPTHDLELAAV+FALKIWRHYL G++ I+TDHKS K
Sbjct: 789 CVLMQNEKVVAYASRQLKPYERNYPTHDLELAAVVFALKIWRHYLYGEKCEIFTDHKSLK 848
Query: 183 YIFTQNELNMRRRRWLELMADYDVDLQYHPGKVNVVPDVLSRR 311
YIFTQ E+NMR+RRWLEL+ DYD+ + YHPGK NVV D LSR+
Sbjct: 849 YIFTQKEINMRQRRWLELLKDYDLTISYHPGKANVVADALSRK 891
Score = 51.6 bits (122), Expect(2) = 7e-48
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +1
Query: 334 ITQQKKLLKEMRELDLIVVCRVTVAERLMTIQVKPTLIERIKEAQSSDPKLQQFREQVEA 513
+T Q+ +L ++R +++ V T L +++++PTLIERIKEAQ D LQ+ R +E
Sbjct: 900 LTSQRSILDDLRRMEIGVRKHGTEG-MLASLRIQPTLIERIKEAQLVDSALQKVRANIET 958
Query: 514 NLRFDFQIH 540
+ DF+IH
Sbjct: 959 GVPSDFRIH 967