BLASTX nr result

ID: Ophiopogon27_contig00019188 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00019188
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258075.1| uncharacterized protein LOC109834463 isoform...    58   4e-07
ref|XP_020258074.1| uncharacterized protein LOC109834463 isoform...    58   4e-07

>ref|XP_020258075.1| uncharacterized protein LOC109834463 isoform X2 [Asparagus
           officinalis]
          Length = 413

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 52/136 (38%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
 Frame = +1

Query: 25  NRCSSYVDSAVNAGLRGPKRRHEESRATDL---AKNSWMSTERIRSRKKRSSLDQSMPE- 192
           N+  S+V +  N+  RG KRR +E +  D    AKN+ +  +R R RKK +SLD S  E 
Sbjct: 48  NKSISHVGNNTNSDSRGTKRRLDERKPIDSSHSAKNTSIR-KRTRRRKKHNSLDLSNHEG 106

Query: 193 ----------ARIAHVTRSELNDVKSSESXXXXXXXXXXXXXTEVGASACEVISDEGLEV 342
                     A  AH  RSE NDVK  E              T  GA AC+ + +E L  
Sbjct: 107 SHRDTHLSKVANDAHEIRSESNDVKRVE---PRKRRRRKKRRTGSGAPACDALLEEPLR- 162

Query: 343 KSRLKSIIVLPTVEKE 390
            SRLKSI+V  TV  E
Sbjct: 163 NSRLKSIVVKETVPVE 178


>ref|XP_020258074.1| uncharacterized protein LOC109834463 isoform X1 [Asparagus
           officinalis]
 gb|ONK76378.1| uncharacterized protein A4U43_C03F27060 [Asparagus officinalis]
          Length = 415

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 52/136 (38%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
 Frame = +1

Query: 25  NRCSSYVDSAVNAGLRGPKRRHEESRATDL---AKNSWMSTERIRSRKKRSSLDQSMPE- 192
           N+  S+V +  N+  RG KRR +E +  D    AKN+ +  +R R RKK +SLD S  E 
Sbjct: 50  NKSISHVGNNTNSDSRGTKRRLDERKPIDSSHSAKNTSIR-KRTRRRKKHNSLDLSNHEG 108

Query: 193 ----------ARIAHVTRSELNDVKSSESXXXXXXXXXXXXXTEVGASACEVISDEGLEV 342
                     A  AH  RSE NDVK  E              T  GA AC+ + +E L  
Sbjct: 109 SHRDTHLSKVANDAHEIRSESNDVKRVE---PRKRRRRKKRRTGSGAPACDALLEEPLR- 164

Query: 343 KSRLKSIIVLPTVEKE 390
            SRLKSI+V  TV  E
Sbjct: 165 NSRLKSIVVKETVPVE 180


Top