BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00019183
         (591 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250227.1| pre-mRNA-processing protein 40C [Asparagus o...   233   1e-67
gb|OMO93899.1| hypothetical protein COLO4_16625 [Corchorus olito...   207   3e-60
ref|XP_021292779.1| pre-mRNA-processing protein 40C [Herrania um...   208   2e-59
gb|EOY01154.1| Pre-mRNA-processing protein 40C [Theobroma cacao]      207   6e-59
ref|XP_010906098.1| PREDICTED: pre-mRNA-processing protein 40C i...   208   7e-59
ref|XP_010906097.1| PREDICTED: pre-mRNA-processing protein 40C i...   208   8e-59
ref|XP_023882762.1| pre-mRNA-processing protein 40C isoform X2 [...   207   1e-58
ref|XP_023882754.1| pre-mRNA-processing protein 40C isoform X1 [...   207   1e-58
ref|XP_007045322.2| PREDICTED: pre-mRNA-processing protein 40C, ...   207   1e-58
gb|POF22764.1| pre-mrna-processing protein 40c [Quercus suber]        207   1e-58
ref|XP_010112279.1| pre-mRNA-processing protein 40C [Morus notab...   204   1e-57
gb|KJB15268.1| hypothetical protein B456_002G167700 [Gossypium r...   202   2e-57
gb|OMO60724.1| hypothetical protein CCACVL1_23916 [Corchorus cap...   202   4e-57
gb|KJB15269.1| hypothetical protein B456_002G167700 [Gossypium r...   202   7e-57
ref|XP_012467146.1| PREDICTED: pre-mRNA-processing protein 40C [...   202   8e-57
gb|KJB15270.1| hypothetical protein B456_002G167700 [Gossypium r...   202   8e-57
gb|KHG18458.1| Transcription elongation regulator 1 [Gossypium a...   201   1e-56
ref|XP_017637434.1| PREDICTED: pre-mRNA-processing protein 40C [...   201   1e-56
ref|XP_016703242.1| PREDICTED: pre-mRNA-processing protein 40C-l...   201   1e-56
ref|XP_016703241.1| PREDICTED: pre-mRNA-processing protein 40C-l...   201   1e-56

>ref|XP_020250227.1| pre-mRNA-processing protein 40C [Asparagus officinalis]
 gb|ONK55246.1| uncharacterized protein A4U43_UnF6000 [Asparagus officinalis]
          Length = 1105

 Score =  233 bits (594), Expect = 1e-67
 Identities = 129/202 (63%), Positives = 147/202 (72%), Gaps = 6/202 (2%)
 Frame = -2

Query: 590  VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
            +P+EV+EM+KNQE+D+ K N  ++ENT  +AEK SAPI +STPA+HTGGRD         
Sbjct: 562  IPSEVSEMKKNQESDASKGNMVQDENTNIVAEKVSAPIYISTPAMHTGGRDSMVVRPSGG 621

Query: 410  XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTV-----NVNSKDKVK 246
                SALDLIKKKLQEAG                 ELNGSRAAD V     ++NSKDK K
Sbjct: 622  QVSSSALDLIKKKLQEAGSPVTSTPLSPSAISTT-ELNGSRAADAVAKGQQSMNSKDKAK 680

Query: 245  DAN-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFK 69
            DAN E NM        DAESGP+KEECIIQF+EMLK+RGVAPF+KWDKELPKIVFDPRFK
Sbjct: 681  DANGEANMSDSSSDSDDAESGPTKEECIIQFREMLKKRGVAPFSKWDKELPKIVFDPRFK 740

Query: 68   AVPSYSARRSIFEHFVRTRAEE 3
            AVPS+SARRSIFEHFVRTRAEE
Sbjct: 741  AVPSHSARRSIFEHFVRTRAEE 762


>gb|OMO93899.1| hypothetical protein COLO4_16625 [Corchorus olitorius]
          Length = 631

 Score =  207 bits (528), Expect = 3e-60
 Identities = 111/200 (55%), Positives = 139/200 (69%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P+EVAE+RK Q++D+ K +A    N   +AEK SAP+++S PAV TGGRD         
Sbjct: 53  IPSEVAELRKKQDSDASKEHAVPVLNVDVVAEKGSAPVSLSAPAVSTGGRDAIPLRTPVV 112

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNV---NSKDKVKDA 240
               SALDLIKKKLQE+G                 ELNGSRA D   +   NSKD++KDA
Sbjct: 113 PGSSSALDLIKKKLQESGVPSSSSPVPVMPVPAAQELNGSRAVDVKGLQSENSKDQLKDA 172

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +GN+        D +SGPSKEECI QFKEMLKERGVAPF+KW+KELPK++FDPRFKA+
Sbjct: 173 NGDGNISDSSSDSEDTDSGPSKEECIKQFKEMLKERGVAPFSKWEKELPKLLFDPRFKAI 232

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           P++SARRS+FEH+V+TRAEE
Sbjct: 233 PTHSARRSLFEHYVKTRAEE 252


>ref|XP_021292779.1| pre-mRNA-processing protein 40C [Herrania umbratica]
          Length = 815

 Score =  208 bits (530), Expect = 2e-59
 Identities = 112/200 (56%), Positives = 137/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P+EVAE+RK Q+ND  K +A    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 271 IPSEVAELRKKQDNDFSKEHAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 330

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNV---NSKDKVKDA 240
               SALDLIKKKLQ++G                 ELNGSR  D   +   NSKDK+KDA
Sbjct: 331 PGSSSALDLIKKKLQDSGVPSSSSPVPVMPVTAAQELNGSRTVDVKGLQSENSKDKLKDA 390

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
             +GN+        D +SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 391 TGDGNISDSSSDSEDTDSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 450

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARR++FEH+V+TRAEE
Sbjct: 451 PSHSARRTLFEHYVKTRAEE 470


>gb|EOY01154.1| Pre-mRNA-processing protein 40C [Theobroma cacao]
          Length = 816

 Score =  207 bits (526), Expect = 6e-59
 Identities = 114/201 (56%), Positives = 139/201 (69%), Gaps = 5/201 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P+EVAE+RK Q+ND  K +A    N   +AEK S PI++S PAV TGGRD         
Sbjct: 271 IPSEVAELRKKQDNDVSKEHAVPVPNIDVVAEKGSTPISLSAPAVSTGGRDAMPLRTSVV 330

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXS-ELNGSRAADTVNV---NSKDKVKD 243
               SALDLIKKKLQ++G                + ELNGSRA D   +   NSKDK+KD
Sbjct: 331 PGSSSALDLIKKKLQDSGVPSSSSSSVPVMPVTAAQELNGSRAVDVKGLQSENSKDKLKD 390

Query: 242 AN-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKA 66
           AN +GN+        D +SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA
Sbjct: 391 ANGDGNISDSSSDSEDTDSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKA 450

Query: 65  VPSYSARRSIFEHFVRTRAEE 3
           +PS+SARR++FEH+V+TRAEE
Sbjct: 451 IPSHSARRTLFEHYVKTRAEE 471


>ref|XP_010906098.1| PREDICTED: pre-mRNA-processing protein 40C isoform X1 [Elaeis
            guineensis]
          Length = 1066

 Score =  208 bits (530), Expect = 7e-59
 Identities = 119/201 (59%), Positives = 138/201 (68%), Gaps = 5/201 (2%)
 Frame = -2

Query: 590  VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
            VPAEV E+RK+QE+D+LK NA +  N   +A+K SAPI+MS PAV TGGRD         
Sbjct: 533  VPAEVLELRKSQESDALKGNANQLTN---VADKGSAPISMSAPAVETGGRDSMALRTSGA 589

Query: 410  XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTV-----NVNSKDKVK 246
                SALDL+KKKLQ+AG                 +LNGS+A +T        NSKDKVK
Sbjct: 590  AVSSSALDLVKKKLQDAGTPVTSSPVPTPGPVAS-DLNGSKAVETAPKGQQGTNSKDKVK 648

Query: 245  DANEGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKA 66
            D  +GNM        D ESGP+KEECI QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA
Sbjct: 649  D--DGNMSDSSSDSDDEESGPTKEECISQFKEMLKERGVAPFSKWEKELPKIVFDPRFKA 706

Query: 65   VPSYSARRSIFEHFVRTRAEE 3
            VPSYSAR++IFEHFVRTR EE
Sbjct: 707  VPSYSARKTIFEHFVRTRVEE 727


>ref|XP_010906097.1| PREDICTED: pre-mRNA-processing protein 40C isoform X2 [Elaeis
            guineensis]
          Length = 1097

 Score =  208 bits (530), Expect = 8e-59
 Identities = 119/201 (59%), Positives = 138/201 (68%), Gaps = 5/201 (2%)
 Frame = -2

Query: 590  VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
            VPAEV E+RK+QE+D+LK NA +  N   +A+K SAPI+MS PAV TGGRD         
Sbjct: 564  VPAEVLELRKSQESDALKGNANQLTN---VADKGSAPISMSAPAVETGGRDSMALRTSGA 620

Query: 410  XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTV-----NVNSKDKVK 246
                SALDL+KKKLQ+AG                 +LNGS+A +T        NSKDKVK
Sbjct: 621  AVSSSALDLVKKKLQDAGTPVTSSPVPTPGPVAS-DLNGSKAVETAPKGQQGTNSKDKVK 679

Query: 245  DANEGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKA 66
            D  +GNM        D ESGP+KEECI QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA
Sbjct: 680  D--DGNMSDSSSDSDDEESGPTKEECISQFKEMLKERGVAPFSKWEKELPKIVFDPRFKA 737

Query: 65   VPSYSARRSIFEHFVRTRAEE 3
            VPSYSAR++IFEHFVRTR EE
Sbjct: 738  VPSYSARKTIFEHFVRTRVEE 758


>ref|XP_023882762.1| pre-mRNA-processing protein 40C isoform X2 [Quercus suber]
          Length = 999

 Score =  207 bits (528), Expect = 1e-58
 Identities = 112/202 (55%), Positives = 139/202 (68%), Gaps = 6/202 (2%)
 Frame = -2

Query: 590  VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
            +P EV E++K Q+ D+LK ++     T    EK SAPI+++ PA++TGGRD         
Sbjct: 454  IPNEVTELKKKQDRDTLKEHSILSTQTNLSTEKESAPISLNAPAINTGGRDALALKASVV 513

Query: 410  XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVN-----SKDKVK 246
                SALDLIKKKLQ++G                SELNGSRA DT+        S++KVK
Sbjct: 514  PGSSSALDLIKKKLQDSGTPVTSSPGPTPSGTAASELNGSRAVDTMAKGLQSEISREKVK 573

Query: 245  DAN-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFK 69
            DAN +GNM        DA+SGP+KEEC+IQFKEMLKERGVAPF+KW+KELPKIVFDPRFK
Sbjct: 574  DANGDGNMTESSSDSEDADSGPTKEECVIQFKEMLKERGVAPFSKWEKELPKIVFDPRFK 633

Query: 68   AVPSYSARRSIFEHFVRTRAEE 3
            A+PSYSARRS+FEH+V+TRAEE
Sbjct: 634  AIPSYSARRSLFEHYVKTRAEE 655


>ref|XP_023882754.1| pre-mRNA-processing protein 40C isoform X1 [Quercus suber]
          Length = 1001

 Score =  207 bits (528), Expect = 1e-58
 Identities = 112/202 (55%), Positives = 139/202 (68%), Gaps = 6/202 (2%)
 Frame = -2

Query: 590  VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
            +P EV E++K Q+ D+LK ++     T    EK SAPI+++ PA++TGGRD         
Sbjct: 456  IPNEVTELKKKQDRDTLKEHSILSTQTNLSTEKESAPISLNAPAINTGGRDALALKASVV 515

Query: 410  XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVN-----SKDKVK 246
                SALDLIKKKLQ++G                SELNGSRA DT+        S++KVK
Sbjct: 516  PGSSSALDLIKKKLQDSGTPVTSSPGPTPSGTAASELNGSRAVDTMAKGLQSEISREKVK 575

Query: 245  DAN-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFK 69
            DAN +GNM        DA+SGP+KEEC+IQFKEMLKERGVAPF+KW+KELPKIVFDPRFK
Sbjct: 576  DANGDGNMTESSSDSEDADSGPTKEECVIQFKEMLKERGVAPFSKWEKELPKIVFDPRFK 635

Query: 68   AVPSYSARRSIFEHFVRTRAEE 3
            A+PSYSARRS+FEH+V+TRAEE
Sbjct: 636  AIPSYSARRSLFEHYVKTRAEE 657


>ref|XP_007045322.2| PREDICTED: pre-mRNA-processing protein 40C, partial [Theobroma
           cacao]
          Length = 899

 Score =  207 bits (526), Expect = 1e-58
 Identities = 114/201 (56%), Positives = 139/201 (69%), Gaps = 5/201 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P+EVAE+RK Q+ND  K +A    N   +AEK S PI++S PAV TGGRD         
Sbjct: 354 IPSEVAELRKKQDNDVSKEHAVPVPNIDVVAEKGSTPISLSAPAVSTGGRDAMPLRTSVV 413

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXS-ELNGSRAADTVNV---NSKDKVKD 243
               SALDLIKKKLQ++G                + ELNGSRA D   +   NSKDK+KD
Sbjct: 414 PGSSSALDLIKKKLQDSGVPSSSSSSVPVMPVTAAQELNGSRAVDVKGLQSENSKDKLKD 473

Query: 242 AN-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKA 66
           AN +GN+        D +SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA
Sbjct: 474 ANGDGNISDSSSDSEDTDSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKA 533

Query: 65  VPSYSARRSIFEHFVRTRAEE 3
           +PS+SARR++FEH+V+TRAEE
Sbjct: 534 IPSHSARRTLFEHYVKTRAEE 554


>gb|POF22764.1| pre-mrna-processing protein 40c [Quercus suber]
          Length = 1052

 Score =  207 bits (528), Expect = 1e-58
 Identities = 112/202 (55%), Positives = 139/202 (68%), Gaps = 6/202 (2%)
 Frame = -2

Query: 590  VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
            +P EV E++K Q+ D+LK ++     T    EK SAPI+++ PA++TGGRD         
Sbjct: 507  IPNEVTELKKKQDRDTLKEHSILSTQTNLSTEKESAPISLNAPAINTGGRDALALKASVV 566

Query: 410  XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVN-----SKDKVK 246
                SALDLIKKKLQ++G                SELNGSRA DT+        S++KVK
Sbjct: 567  PGSSSALDLIKKKLQDSGTPVTSSPGPTPSGTAASELNGSRAVDTMAKGLQSEISREKVK 626

Query: 245  DAN-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFK 69
            DAN +GNM        DA+SGP+KEEC+IQFKEMLKERGVAPF+KW+KELPKIVFDPRFK
Sbjct: 627  DANGDGNMTESSSDSEDADSGPTKEECVIQFKEMLKERGVAPFSKWEKELPKIVFDPRFK 686

Query: 68   AVPSYSARRSIFEHFVRTRAEE 3
            A+PSYSARRS+FEH+V+TRAEE
Sbjct: 687  AIPSYSARRSLFEHYVKTRAEE 708


>ref|XP_010112279.1| pre-mRNA-processing protein 40C [Morus notabilis]
 gb|EXC33082.1| Transcription elongation regulator 1 [Morus notabilis]
          Length = 829

 Score =  204 bits (518), Expect = 1e-57
 Identities = 113/202 (55%), Positives = 134/202 (66%), Gaps = 6/202 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK QE+D  K N+T   N   +AEK S PIN++ PA++TGGRD         
Sbjct: 282 IPNEVTELRKKQESDIPKENSTSVPNNNVLAEKGSTPINLNAPAINTGGRDAMALRSTSA 341

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTV-----NVNSKDKVK 246
               SALDLIKKKLQE G                SE NGSRA +       + +SKDK K
Sbjct: 342 QGSSSALDLIKKKLQEFGTPVTSSSGQVQPGIAASESNGSRAVEPTAKGQQSESSKDKPK 401

Query: 245 DAN-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFK 69
           DAN + NM        DA+SGP+KEECIIQFKEMLKERGVAPF+KW+KELPKIVFDPRFK
Sbjct: 402 DANGDRNMTDSSSDSEDADSGPTKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFK 461

Query: 68  AVPSYSARRSIFEHFVRTRAEE 3
           A+PSYS RRS+FEH+V+TR EE
Sbjct: 462 AIPSYSLRRSLFEHYVKTRVEE 483


>gb|KJB15268.1| hypothetical protein B456_002G167700 [Gossypium raimondii]
          Length = 736

 Score =  202 bits (513), Expect = 2e-57
 Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK Q+++  K NA    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 192 IPNEVTELRKKQDSEVSKENAVSVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 251

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVNS---KDKVKDA 240
               SALDLIKKKLQ+ G                 ELNGSRA D   + S   KDK+KDA
Sbjct: 252 PGSSSALDLIKKKLQDPGVPSSSPVPVVPVTATH-ELNGSRAVDVKGLQSESNKDKLKDA 310

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +G++        DA+SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 311 NGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 370

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARRS+FEH+V+TRAEE
Sbjct: 371 PSHSARRSLFEHYVKTRAEE 390


>gb|OMO60724.1| hypothetical protein CCACVL1_23916 [Corchorus capsularis]
          Length = 896

 Score =  202 bits (515), Expect = 4e-57
 Identities = 111/201 (55%), Positives = 138/201 (68%), Gaps = 5/201 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSI-AEKTSAPINMSTPAVHTGGRDXXXXXXXX 414
           +P+EVAE+RK Q++D+ K +A    N   + AEK SAP+++S PAV TGGRD        
Sbjct: 351 IPSEVAELRKKQDSDASKEHAVPVLNVVDVVAEKGSAPVSLSAPAVSTGGRDAIPLRTPV 410

Query: 413 XXXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNV---NSKDKVKD 243
                SALDLIKKKLQE+G                 ELNGSR  D   +   NSKDK+KD
Sbjct: 411 VPGSSSALDLIKKKLQESGVPSSSSPVPVMPVPAAQELNGSREVDVKGLQSENSKDKLKD 470

Query: 242 AN-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKA 66
           AN +GN+        D +SGPSKEECI QFKEMLKERGVAPF+KW+KELPK++FDPRFKA
Sbjct: 471 ANGDGNISDSSSDSEDTDSGPSKEECIKQFKEMLKERGVAPFSKWEKELPKLLFDPRFKA 530

Query: 65  VPSYSARRSIFEHFVRTRAEE 3
           +P++SARRS+FEH+V+TRAEE
Sbjct: 531 IPTHSARRSLFEHYVKTRAEE 551


>gb|KJB15269.1| hypothetical protein B456_002G167700 [Gossypium raimondii]
          Length = 886

 Score =  202 bits (513), Expect = 7e-57
 Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK Q+++  K NA    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 343 IPNEVTELRKKQDSEVSKENAVSVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 402

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVNS---KDKVKDA 240
               SALDLIKKKLQ+ G                 ELNGSRA D   + S   KDK+KDA
Sbjct: 403 PGSSSALDLIKKKLQDPGVPSSSPVPVVPVTATH-ELNGSRAVDVKGLQSESNKDKLKDA 461

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +G++        DA+SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 462 NGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 521

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARRS+FEH+V+TRAEE
Sbjct: 522 PSHSARRSLFEHYVKTRAEE 541


>ref|XP_012467146.1| PREDICTED: pre-mRNA-processing protein 40C [Gossypium raimondii]
 gb|KJB15267.1| hypothetical protein B456_002G167700 [Gossypium raimondii]
          Length = 887

 Score =  202 bits (513), Expect = 8e-57
 Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK Q+++  K NA    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 343 IPNEVTELRKKQDSEVSKENAVSVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 402

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVNS---KDKVKDA 240
               SALDLIKKKLQ+ G                 ELNGSRA D   + S   KDK+KDA
Sbjct: 403 PGSSSALDLIKKKLQDPGVPSSSPVPVVPVTATH-ELNGSRAVDVKGLQSESNKDKLKDA 461

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +G++        DA+SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 462 NGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 521

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARRS+FEH+V+TRAEE
Sbjct: 522 PSHSARRSLFEHYVKTRAEE 541


>gb|KJB15270.1| hypothetical protein B456_002G167700 [Gossypium raimondii]
          Length = 888

 Score =  202 bits (513), Expect = 8e-57
 Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK Q+++  K NA    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 344 IPNEVTELRKKQDSEVSKENAVSVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 403

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVNS---KDKVKDA 240
               SALDLIKKKLQ+ G                 ELNGSRA D   + S   KDK+KDA
Sbjct: 404 PGSSSALDLIKKKLQDPGVPSSSPVPVVPVTATH-ELNGSRAVDVKGLQSESNKDKLKDA 462

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +G++        DA+SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 463 NGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 522

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARRS+FEH+V+TRAEE
Sbjct: 523 PSHSARRSLFEHYVKTRAEE 542


>gb|KHG18458.1| Transcription elongation regulator 1 [Gossypium arboreum]
          Length = 876

 Score =  201 bits (512), Expect = 1e-56
 Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK Q+++  K NA    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 296 IPYEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 355

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVNS---KDKVKDA 240
               SALDLIKKKLQ+ G                 ELNGSRA D   + S   KDK+KDA
Sbjct: 356 PGSSSALDLIKKKLQDPGVPSSSPVPVMPVTATH-ELNGSRAVDVKGLQSESNKDKLKDA 414

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +G++        DA+SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 415 NGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 474

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARRS+FEH+V+TRAEE
Sbjct: 475 PSHSARRSLFEHYVKTRAEE 494


>ref|XP_017637434.1| PREDICTED: pre-mRNA-processing protein 40C [Gossypium arboreum]
          Length = 885

 Score =  201 bits (512), Expect = 1e-56
 Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK Q+++  K NA    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 342 IPYEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 401

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVNS---KDKVKDA 240
               SALDLIKKKLQ+ G                 ELNGSRA D   + S   KDK+KDA
Sbjct: 402 PGSSSALDLIKKKLQDPGVPSSSPVPVMPVTATH-ELNGSRAVDVKGLQSESNKDKLKDA 460

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +G++        DA+SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 461 NGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 520

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARRS+FEH+V+TRAEE
Sbjct: 521 PSHSARRSLFEHYVKTRAEE 540


>ref|XP_016703242.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2
           [Gossypium hirsutum]
          Length = 885

 Score =  201 bits (512), Expect = 1e-56
 Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK Q+++  K NA    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 342 IPNEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 401

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVNS---KDKVKDA 240
               SALDLIKKKLQ+ G                 ELNGSRA D   + S   KDK+KDA
Sbjct: 402 PGSSSALDLIKKKLQDPGVPSSSPVPVMPVTATH-ELNGSRAVDVKGLQSESNKDKLKDA 460

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +G++        DA+SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 461 NGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 520

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARRS+FEH+V+TRAEE
Sbjct: 521 PSHSARRSLFEHYVKTRAEE 540


>ref|XP_016703241.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1
           [Gossypium hirsutum]
          Length = 886

 Score =  201 bits (512), Expect = 1e-56
 Identities = 112/200 (56%), Positives = 136/200 (68%), Gaps = 4/200 (2%)
 Frame = -2

Query: 590 VPAEVAEMRKNQENDSLKTNATEEENTGSIAEKTSAPINMSTPAVHTGGRDXXXXXXXXX 411
           +P EV E+RK Q+++  K NA    N   +AEK S PI++S PAV+TGGRD         
Sbjct: 342 IPNEVTELRKKQDSEVSKENAVPVPNIDVVAEKGSTPISLSAPAVNTGGRDAMPLRTSVV 401

Query: 410 XXXXSALDLIKKKLQEAGXXXXXXXXXXXXXXXXSELNGSRAADTVNVNS---KDKVKDA 240
               SALDLIKKKLQ+ G                 ELNGSRA D   + S   KDK+KDA
Sbjct: 402 PGSSSALDLIKKKLQDPGVPSSSPVPVMPVTATH-ELNGSRAVDVKGLQSESNKDKLKDA 460

Query: 239 N-EGNMXXXXXXXXDAESGPSKEECIIQFKEMLKERGVAPFAKWDKELPKIVFDPRFKAV 63
           N +G++        DA+SGPSKEECI+QFKEMLKERGVAPF+KW+KELPKIVFDPRFKA+
Sbjct: 461 NGDGSISDSSSDSEDADSGPSKEECIMQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAI 520

Query: 62  PSYSARRSIFEHFVRTRAEE 3
           PS+SARRS+FEH+V+TRAEE
Sbjct: 521 PSHSARRSLFEHYVKTRAEE 540