BLASTX nr result
ID: Ophiopogon27_contig00018795
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00018795
(702 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus... 323 e-100
ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein... 325 2e-99
ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 310 2e-95
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 307 2e-94
ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage fact... 303 1e-92
ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage fact... 277 3e-83
gb|PKA62212.1| hypothetical protein AXF42_Ash015097 [Apostasia s... 271 3e-81
gb|OAY74981.1| Polyadenylation and cleavage factor [Ananas comosus] 267 1e-80
ref|XP_020103161.1| polyadenylation and cleavage factor homolog ... 267 8e-80
gb|PKA50132.1| hypothetical protein AXF42_Ash020372 [Apostasia s... 260 3e-77
gb|PKI64725.1| hypothetical protein CRG98_014857 [Punica granatum] 240 2e-76
gb|EOY28631.1| PCF11P-similar protein 4, putative isoform 2 [The... 252 7e-76
gb|ERN19518.1| hypothetical protein AMTR_s00062p00031880 [Ambore... 257 8e-76
ref|XP_011628430.1| polyadenylation and cleavage factor homolog ... 257 9e-76
ref|XP_019257117.1| PREDICTED: polyadenylation and cleavage fact... 256 1e-75
gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium r... 253 1e-75
ref|XP_016492698.1| PREDICTED: polyadenylation and cleavage fact... 253 3e-75
ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage fact... 255 5e-75
ref|XP_015695514.1| PREDICTED: polyadenylation and cleavage fact... 253 6e-75
ref|XP_019195958.1| PREDICTED: polyadenylation and cleavage fact... 250 7e-75
>gb|ONK65902.1| uncharacterized protein A4U43_C06F2150 [Asparagus officinalis]
Length = 1031
Score = 323 bits (828), Expect = e-100
Identities = 164/211 (77%), Positives = 182/211 (86%), Gaps = 8/211 (3%)
Frame = -3
Query: 697 TSGIIVDRFRALARDNEDIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEGIADAIC 518
TSG+I+DRF+AL RD E++VQ YEELLSELTFNSKPIIT+LTIIAGEQRE GEGIADAI
Sbjct: 95 TSGLILDRFKALVRDGEEVVQAYEELLSELTFNSKPIITELTIIAGEQREFGEGIADAIF 154
Query: 517 ARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHTSMRHLF 338
RILEVPVDQKLPSLYLLDSIVKNIGREYVRYFA +LPKVFC AYNQVHSNMH +MRHLF
Sbjct: 155 GRILEVPVDQKLPSLYLLDSIVKNIGREYVRYFATQLPKVFCEAYNQVHSNMHPAMRHLF 214
Query: 337 GTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPLHGIHVNPKYLEARR 158
GTWSQVFPSSVLRKIE++LQFS+ E+QR GQ N+RNSESPSPRP HGIHVNPKYLEA+R
Sbjct: 215 GTWSQVFPSSVLRKIENKLQFSTNESQRSVGQTNIRNSESPSPRPSHGIHVNPKYLEAQR 274
Query: 157 QHQHSASAGI--------IDTEKIVHTVDIE 89
Q QHSAS + + TE V+T+ IE
Sbjct: 275 QLQHSASVVVDELISYPCVWTETSVYTLTIE 305
>ref|XP_020269462.1| LOW QUALITY PROTEIN: uncharacterized protein LOC109844760 [Asparagus
officinalis]
Length = 1407
Score = 325 bits (833), Expect = 2e-99
Identities = 159/196 (81%), Positives = 178/196 (90%)
Frame = -3
Query: 697 TSGIIVDRFRALARDNEDIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEGIADAIC 518
TSG+I+DRF+AL RD E++VQ YEELLSELTFNSKPIIT+LTIIAGEQRE GEGIADAI
Sbjct: 424 TSGLILDRFKALVRDGEEVVQAYEELLSELTFNSKPIITELTIIAGEQREFGEGIADAIF 483
Query: 517 ARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHTSMRHLF 338
RILEVPVDQKLPSLYLLDSIVKNIGREYVRYFA +LPKVFC AYNQVHSNMH +MRHLF
Sbjct: 484 GRILEVPVDQKLPSLYLLDSIVKNIGREYVRYFATQLPKVFCEAYNQVHSNMHPAMRHLF 543
Query: 337 GTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPLHGIHVNPKYLEARR 158
GTWSQVFPSSVLRKIE++LQFS+ E+QR GQ N+RNSESPSPRP HGIHVNPKYLEA+R
Sbjct: 544 GTWSQVFPSSVLRKIENKLQFSTNESQRSVGQTNIRNSESPSPRPSHGIHVNPKYLEAQR 603
Query: 157 QHQHSASAGIIDTEKI 110
Q QHSAS G++ +++
Sbjct: 604 QLQHSASVGVMTLKRM 619
>ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4-like [Phoenix dactylifera]
Length = 1063
Score = 310 bits (794), Expect = 2e-95
Identities = 155/245 (63%), Positives = 184/245 (75%), Gaps = 18/245 (7%)
Frame = -3
Query: 685 IVDRFRALARDNED------------------IVQVYEELLSELTFNSKPIITDLTIIAG 560
I+DRFRA+ R+ E+ IV++YEELLSELTFNSKPIIT+LTIIAG
Sbjct: 41 ILDRFRAMLREREEELREATGEDTPRPPTAGEIVRLYEELLSELTFNSKPIITELTIIAG 100
Query: 559 EQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYN 380
+ + EGIADAIC R+LEVP+DQKLPSLYLLDSIVKNIGREY+RYFA RLPKVFC AYN
Sbjct: 101 QHLQFAEGIADAICVRVLEVPLDQKLPSLYLLDSIVKNIGREYMRYFAARLPKVFCEAYN 160
Query: 379 QVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPL 200
QVH N + +MRHLFGTW QVFP SVLRKIED LQFS +++ + +G +MR SESPSPRP
Sbjct: 161 QVHPNQYPAMRHLFGTWFQVFPLSVLRKIEDELQFSPSKSNQSSGITSMRRSESPSPRPS 220
Query: 199 HGIHVNPKYLEARRQHQHSASAGIIDTEKIVHTVDIEEDAVERLATESPKGWSGASPKYH 20
HGIHVNPKYLEAR +HS + +++ VH D + +E A+E KGWSGASPK+H
Sbjct: 221 HGIHVNPKYLEARHLFKHSTAVRAVESHDKVHMTDFNGEQMEENASEGLKGWSGASPKFH 280
Query: 19 DTEHA 5
D EHA
Sbjct: 281 DIEHA 285
>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Elaeis guineensis]
Length = 1070
Score = 307 bits (787), Expect = 2e-94
Identities = 154/245 (62%), Positives = 184/245 (75%), Gaps = 18/245 (7%)
Frame = -3
Query: 685 IVDRFRALARDNED------------------IVQVYEELLSELTFNSKPIITDLTIIAG 560
I+DRFRA+ R+ ++ IV++YEELLSELTFNSKPIIT+LTIIAG
Sbjct: 41 ILDRFRAMLRERDEELREAIGEDPPPPPTAGEIVRLYEELLSELTFNSKPIITELTIIAG 100
Query: 559 EQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYN 380
+ + EGIADAICAR+LEVP+DQKLPSLYLLDSIVKNIGREYVRYFA RLPKVFC AYN
Sbjct: 101 QHPQLAEGIADAICARVLEVPLDQKLPSLYLLDSIVKNIGREYVRYFAARLPKVFCEAYN 160
Query: 379 QVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPL 200
QVH + + +MRHLFGTWSQVFP SVLRKIED LQFS ++ + +G +MR SESPSPRP
Sbjct: 161 QVHPSQYPAMRHLFGTWSQVFPLSVLRKIEDELQFSPSKNSQSSGITSMRQSESPSPRPS 220
Query: 199 HGIHVNPKYLEARRQHQHSASAGIIDTEKIVHTVDIEEDAVERLATESPKGWSGASPKYH 20
HGIHVNPKYLEAR +HS + +++ H D + + +E A+E KGWSG SPK+H
Sbjct: 221 HGIHVNPKYLEARHLFKHSTTMRAVESHDKAHMTDFDGEQMEGNASEGLKGWSGGSPKFH 280
Query: 19 DTEHA 5
D EHA
Sbjct: 281 DIEHA 285
>ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera]
ref|XP_008808981.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera]
ref|XP_008808982.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera]
ref|XP_008808983.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera]
Length = 1065
Score = 303 bits (775), Expect = 1e-92
Identities = 155/248 (62%), Positives = 181/248 (72%), Gaps = 22/248 (8%)
Frame = -3
Query: 685 IVDRFRALARDNED----------------------IVQVYEELLSELTFNSKPIITDLT 572
I+DRFRA+ R+ E+ IV++Y+ELLSELTFNSKPIITDL+
Sbjct: 42 ILDRFRAMLREREEELREATGEDPPPSPPPPHTAGEIVRLYKELLSELTFNSKPIITDLS 101
Query: 571 IIAGEQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFC 392
IIAG+ + EGIA+AICARILEVPVDQKLPSLYLLDSIVKNIGR+YVRYFA RLPKVFC
Sbjct: 102 IIAGQHSQFAEGIANAICARILEVPVDQKLPSLYLLDSIVKNIGRDYVRYFAARLPKVFC 161
Query: 391 GAYNQVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPS 212
AYNQVH + SMRHLFGTW QVFP SVLRKIED LQFS E ++ +G ++ R+SESPS
Sbjct: 162 EAYNQVHPTQYPSMRHLFGTWFQVFPLSVLRKIEDELQFSPTENKQSSGMSSTRHSESPS 221
Query: 211 PRPLHGIHVNPKYLEARRQHQHSASAGIIDTEKIVHTVDIEEDAVERLATESPKGWSGAS 32
RP HGIHVNPKYLEAR+Q +H D VHT D + + +E A+E KGW GAS
Sbjct: 222 SRPSHGIHVNPKYLEARQQLKHPTLMCAADGHDKVHTTDFDGERMEGRASEGSKGWQGAS 281
Query: 31 PKYHDTEH 8
PK+HD EH
Sbjct: 282 PKFHDIEH 289
>ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Musa acuminata subsp. malaccensis]
ref|XP_009399216.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1039
Score = 277 bits (708), Expect = 3e-83
Identities = 135/215 (62%), Positives = 168/215 (78%)
Frame = -3
Query: 649 EDIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVDQKLPSLY 470
+D+V+ YE++L+ELTFNSKPII++LT+IAG Q + + IADAICAR+LEVPVDQKLPSLY
Sbjct: 60 DDVVRCYEDVLAELTFNSKPIISELTMIAGHQVRYAKEIADAICARVLEVPVDQKLPSLY 119
Query: 469 LLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHTSMRHLFGTWSQVFPSSVLRKIE 290
L+DSIVKNIG EYV+ A RLPKVFC AYNQVH + ++ MRHLF TWSQVFP SVL+KIE
Sbjct: 120 LIDSIVKNIGHEYVKILATRLPKVFCEAYNQVHPSQYSPMRHLFKTWSQVFPLSVLQKIE 179
Query: 289 DRLQFSSAETQRPAGQANMRNSESPSPRPLHGIHVNPKYLEARRQHQHSASAGIIDTEKI 110
D LQFS +E +RP+G A+ R S+S SP P HGIHVNPKYLEARRQ + S+ +DT K
Sbjct: 180 DELQFSPSENERPSGIASTRPSKSTSPCPSHGIHVNPKYLEARRQFEQSSVIHAVDTHKN 239
Query: 109 VHTVDIEEDAVERLATESPKGWSGASPKYHDTEHA 5
D + + +E L++E P+GWSGA+ K H HA
Sbjct: 240 AQESDYDLERLEGLSSEKPEGWSGATRKLHSMPHA 274
>gb|PKA62212.1| hypothetical protein AXF42_Ash015097 [Apostasia shenzhenica]
Length = 985
Score = 271 bits (692), Expect = 3e-81
Identities = 140/201 (69%), Positives = 160/201 (79%), Gaps = 19/201 (9%)
Frame = -3
Query: 685 IVDRFRALARDNED-------------------IVQVYEELLSELTFNSKPIITDLTIIA 563
I+DRFRA+ R+ E+ IV +YEELLSELTFNSKPIIT+LTIIA
Sbjct: 34 ILDRFRAMLREREEELRAAGIGEGDPPPPYGREIVGMYEELLSELTFNSKPIITELTIIA 93
Query: 562 GEQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAY 383
GEQREH +GIADA+CARI EVP DQKLPSLYLLDSIVKNIGREYVRYFA RLPKVFC AY
Sbjct: 94 GEQREHAKGIADAVCARIDEVPQDQKLPSLYLLDSIVKNIGREYVRYFASRLPKVFCEAY 153
Query: 382 NQVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRP 203
+QVHS++H +MRHLFGTWSQVFP SVL KIEDRL+ S+ E QRP G AN+RNSE+P PRP
Sbjct: 154 SQVHSSLHPAMRHLFGTWSQVFPVSVLSKIEDRLKLSTPENQRPPGLANVRNSETP-PRP 212
Query: 202 LHGIHVNPKYLEARRQHQHSA 140
IH+NPKYLEAR+Q ++ A
Sbjct: 213 SSVIHINPKYLEARKQFENPA 233
>gb|OAY74981.1| Polyadenylation and cleavage factor [Ananas comosus]
Length = 860
Score = 267 bits (683), Expect = 1e-80
Identities = 134/199 (67%), Positives = 160/199 (80%), Gaps = 18/199 (9%)
Frame = -3
Query: 685 IVDRFRALARDNED------------------IVQVYEELLSELTFNSKPIITDLTIIAG 560
I++RFRA+ R+ E+ +V++YEE+L+ELTFNSKPIIT+LTIIAG
Sbjct: 45 ILERFRAMIREREEEMSEVLDGDPPPPPTAAEVVRMYEEVLAELTFNSKPIITELTIIAG 104
Query: 559 EQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYN 380
+ + +GIA+AICARILEVP+DQKLPSLYLLDSIVKNIG++YVR+FA RLPKVFC AYN
Sbjct: 105 QHIQFAQGIANAICARILEVPMDQKLPSLYLLDSIVKNIGQDYVRHFASRLPKVFCEAYN 164
Query: 379 QVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPL 200
QVH +++++MRHLFGTWSQVFPSSVLRKIED LQFS E QR G AN+R SESPSPRP
Sbjct: 165 QVHPSLYSAMRHLFGTWSQVFPSSVLRKIEDALQFSPRENQRSLGIANLRQSESPSPRPS 224
Query: 199 HGIHVNPKYLEARRQHQHS 143
HGIHVNPKYLEAR Q + S
Sbjct: 225 HGIHVNPKYLEARNQFKSS 243
>ref|XP_020103161.1| polyadenylation and cleavage factor homolog 4-like [Ananas comosus]
Length = 999
Score = 267 bits (683), Expect = 8e-80
Identities = 134/199 (67%), Positives = 160/199 (80%), Gaps = 18/199 (9%)
Frame = -3
Query: 685 IVDRFRALARDNED------------------IVQVYEELLSELTFNSKPIITDLTIIAG 560
I++RFRA+ R+ E+ +V++YEE+L+ELTFNSKPIIT+LTIIAG
Sbjct: 45 ILERFRAMIREREEEMSEVLDGDPPPPPTAAEVVRMYEEVLAELTFNSKPIITELTIIAG 104
Query: 559 EQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYN 380
+ + +GIA+AICARILEVP+DQKLPSLYLLDSIVKNIG++YVR+FA RLPKVFC AYN
Sbjct: 105 QHIQFAQGIANAICARILEVPMDQKLPSLYLLDSIVKNIGQDYVRHFASRLPKVFCEAYN 164
Query: 379 QVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPL 200
QVH +++++MRHLFGTWSQVFPSSVLRKIED LQFS E QR G AN+R SESPSPRP
Sbjct: 165 QVHPSLYSAMRHLFGTWSQVFPSSVLRKIEDALQFSPRENQRSLGIANLRQSESPSPRPS 224
Query: 199 HGIHVNPKYLEARRQHQHS 143
HGIHVNPKYLEAR Q + S
Sbjct: 225 HGIHVNPKYLEARNQFKSS 243
>gb|PKA50132.1| hypothetical protein AXF42_Ash020372 [Apostasia shenzhenica]
Length = 986
Score = 260 bits (665), Expect = 3e-77
Identities = 136/201 (67%), Positives = 157/201 (78%), Gaps = 19/201 (9%)
Frame = -3
Query: 685 IVDRFRALARDNED-------------------IVQVYEELLSELTFNSKPIITDLTIIA 563
I+DRFRA+ R+ E+ IV +Y+ELLSELTFNSKPIIT+LTIIA
Sbjct: 34 ILDRFRAMLREREEELRAAGIGGGDPPPPYGREIVGMYKELLSELTFNSKPIITELTIIA 93
Query: 562 GEQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAY 383
GEQREH +GIADA+CA I EVP DQKLPSLYLLDSIVKNIGREYVRYFA RLPKVFC AY
Sbjct: 94 GEQREHAKGIADAVCAWINEVPQDQKLPSLYLLDSIVKNIGREYVRYFAARLPKVFCEAY 153
Query: 382 NQVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRP 203
+QVHS++H +MRHLFGTWSQVFP SVL KIEDRL+ S+ E QRP G AN+RNSE +PRP
Sbjct: 154 SQVHSSLHPAMRHLFGTWSQVFPISVLSKIEDRLKLSTPENQRPPGLANVRNSE--TPRP 211
Query: 202 LHGIHVNPKYLEARRQHQHSA 140
IH+NPKYLE R+Q ++ A
Sbjct: 212 SSVIHINPKYLEDRKQFENPA 232
>gb|PKI64725.1| hypothetical protein CRG98_014857 [Punica granatum]
Length = 257
Score = 240 bits (613), Expect = 2e-76
Identities = 127/192 (66%), Positives = 150/192 (78%), Gaps = 10/192 (5%)
Frame = -3
Query: 685 IVDRFRALA--RDNE--------DIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEG 536
I+DRFRAL RD+E +IV++YE +L+ELTFNSKPIITDLTIIAGEQ+ +GEG
Sbjct: 38 ILDRFRALLKLRDDEGLSPPGSDEIVRIYESMLTELTFNSKPIITDLTIIAGEQKANGEG 97
Query: 535 IADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHT 356
IADAICARI+E PVDQKLPSLYLLDSIVKNIG+EYVR+F+ RLP+VFC AY QV +M+
Sbjct: 98 IADAICARIIEAPVDQKLPSLYLLDSIVKNIGKEYVRHFSSRLPEVFCEAYRQVDPSMYG 157
Query: 355 SMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPLHGIHVNPK 176
SMRHLFGTWS FP VLRKIE L+FS+ E + G ++R+ E SPRP HGIHVNPK
Sbjct: 158 SMRHLFGTWSTYFPPQVLRKIETELRFSTQERNQTGGVTSLRSPE--SPRPSHGIHVNPK 215
Query: 175 YLEARRQHQHSA 140
Y+ RQ HSA
Sbjct: 216 YV---RQLDHSA 224
>gb|EOY28631.1| PCF11P-similar protein 4, putative isoform 2 [Theobroma cacao]
Length = 733
Score = 252 bits (644), Expect = 7e-76
Identities = 133/207 (64%), Positives = 154/207 (74%), Gaps = 22/207 (10%)
Frame = -3
Query: 685 IVDRFRALARDNED----------------------IVQVYEELLSELTFNSKPIITDLT 572
I +RF+AL + ED IVQ+YE +LSELTFNSKPIITDLT
Sbjct: 13 ISERFKALLKQREDDLRVSGGDDGDDEVAATPSRGEIVQLYEAVLSELTFNSKPIITDLT 72
Query: 571 IIAGEQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFC 392
IIAGEQREHGEGIADAICARILEVPV+QKLPSLYLLDSIVKNIGREYVR+F+ RLP+VFC
Sbjct: 73 IIAGEQREHGEGIADAICARILEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFC 132
Query: 391 GAYNQVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPS 212
AY QV+ N++ +MRHLFGTWS VFP SVLRKIE +LQFS + Q+ G ++R+SE S
Sbjct: 133 EAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQLQFSQSANQQSPGVTSLRSSE--S 190
Query: 211 PRPLHGIHVNPKYLEARRQHQHSASAG 131
PRP HGIHVNPKYL Q + S+G
Sbjct: 191 PRPTHGIHVNPKYLRQLEQQSGADSSG 217
>gb|ERN19518.1| hypothetical protein AMTR_s00062p00031880 [Amborella trichopoda]
Length = 1045
Score = 257 bits (656), Expect = 8e-76
Identities = 139/240 (57%), Positives = 170/240 (70%), Gaps = 13/240 (5%)
Frame = -3
Query: 685 IVDRFRALARD----------NEDIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEG 536
I+DRF+A R+ +ED+V +Y E LSELTFN KPIIT+LTIIAGEQ+E+ +G
Sbjct: 28 ILDRFKAYLREREEEEEMGVSSEDVVALYMEELSELTFNCKPIITELTIIAGEQQEYAKG 87
Query: 535 IADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHT 356
I AIC RI+EVP +QKLPSLYLLDSIVKNIG EYV YF+ RLP VFC AY QV +
Sbjct: 88 IVAAICVRIIEVPAEQKLPSLYLLDSIVKNIGGEYVNYFSLRLPDVFCKAYRQVDPGQYQ 147
Query: 355 SMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRP-AGQANMRNSESPSPRPLHGIHVNP 179
+MRHLFGTW+ +FPSSVLR IE LQFS +RP +G A R S+S PRP HGIHVNP
Sbjct: 148 AMRHLFGTWTGIFPSSVLRAIEVELQFS--PVRRPSSGMAPSRPSDSQPPRPAHGIHVNP 205
Query: 178 KYLEARRQHQHSASAGII--DTEKIVHTVDIEEDAVERLATESPKGWSGASPKYHDTEHA 5
KYLEARRQ + + +I + E +H E + +ER+A ESP+GWSGASP+ H + A
Sbjct: 206 KYLEARRQFE---NPNVIKRERENNLHMTAFEGERMERVALESPEGWSGASPRLHTNQQA 262
>ref|XP_011628430.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Amborella
trichopoda]
ref|XP_011628431.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Amborella
trichopoda]
ref|XP_020531516.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Amborella
trichopoda]
ref|XP_020531517.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Amborella
trichopoda]
Length = 1054
Score = 257 bits (656), Expect = 9e-76
Identities = 139/240 (57%), Positives = 170/240 (70%), Gaps = 13/240 (5%)
Frame = -3
Query: 685 IVDRFRALARD----------NEDIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEG 536
I+DRF+A R+ +ED+V +Y E LSELTFN KPIIT+LTIIAGEQ+E+ +G
Sbjct: 28 ILDRFKAYLREREEEEEMGVSSEDVVALYMEELSELTFNCKPIITELTIIAGEQQEYAKG 87
Query: 535 IADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHT 356
I AIC RI+EVP +QKLPSLYLLDSIVKNIG EYV YF+ RLP VFC AY QV +
Sbjct: 88 IVAAICVRIIEVPAEQKLPSLYLLDSIVKNIGGEYVNYFSLRLPDVFCKAYRQVDPGQYQ 147
Query: 355 SMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRP-AGQANMRNSESPSPRPLHGIHVNP 179
+MRHLFGTW+ +FPSSVLR IE LQFS +RP +G A R S+S PRP HGIHVNP
Sbjct: 148 AMRHLFGTWTGIFPSSVLRAIEVELQFS--PVRRPSSGMAPSRPSDSQPPRPAHGIHVNP 205
Query: 178 KYLEARRQHQHSASAGII--DTEKIVHTVDIEEDAVERLATESPKGWSGASPKYHDTEHA 5
KYLEARRQ + + +I + E +H E + +ER+A ESP+GWSGASP+ H + A
Sbjct: 206 KYLEARRQFE---NPNVIKRERENNLHMTAFEGERMERVALESPEGWSGASPRLHTNQQA 262
>ref|XP_019257117.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Nicotiana
attenuata]
gb|OIS96062.1| polyadenylation and cleavage factor -like 4 [Nicotiana attenuata]
Length = 982
Score = 256 bits (653), Expect = 1e-75
Identities = 131/205 (63%), Positives = 160/205 (78%)
Frame = -3
Query: 649 EDIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVDQKLPSLY 470
++IV++YE LS+LTFNSKP+ITDLTIIAGEQREHG+GIADAIC+RILEVPV+QKLPSLY
Sbjct: 68 DEIVRLYELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLY 127
Query: 469 LLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHTSMRHLFGTWSQVFPSSVLRKIE 290
LLDSIVKNIGR+YVR+F+ LP+VFC AY QVH +MH +MRHLFGTWS VFP+ VLRKIE
Sbjct: 128 LLDSIVKNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIE 187
Query: 289 DRLQFSSAETQRPAGQANMRNSESPSPRPLHGIHVNPKYLEARRQHQHSASAGIIDTEKI 110
RLQFS + Q+ +G + R SE SPRP HGIHVNPKYLEARRQ HS + + E +
Sbjct: 188 TRLQFSQSGAQQSSGLTSSRASE--SPRPTHGIHVNPKYLEARRQLGHS-TIDSVRAENL 244
Query: 109 VHTVDIEEDAVERLATESPKGWSGA 35
+ + +A + L+T S S +
Sbjct: 245 AGHISSDLEAKQVLSTASKNARSSS 269
>gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
Length = 831
Score = 253 bits (647), Expect = 1e-75
Identities = 129/182 (70%), Positives = 148/182 (81%), Gaps = 9/182 (4%)
Frame = -3
Query: 649 EDIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVDQKLPSLY 470
E+IVQ+YE +LSELTFNSKPIITDLTIIAGEQREHGEGIADAICARI+EVPV+QKLPSLY
Sbjct: 47 EEIVQLYEVVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLY 106
Query: 469 LLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHTSMRHLFGTWSQVFPSSVLRKIE 290
LLDSIVKNIGREYVRYF+ RLP+VFC AY QV+ N+H +MRHLFGTWS VFP SVLRKIE
Sbjct: 107 LLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIE 166
Query: 289 DRLQFSSAETQRPAGQANMRNSESPSPRPLHGIHVNPKYL---------EARRQHQHSAS 137
+LQFS Q+ +G ++++SE SPRP HGIHVNPKYL ++ QH S
Sbjct: 167 MQLQFSQTGNQQSSGVTSLQSSE--SPRPTHGIHVNPKYLRQFEQQSGADSNTQHVRGMS 224
Query: 136 AG 131
AG
Sbjct: 225 AG 226
>ref|XP_016492698.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Nicotiana tabacum]
Length = 900
Score = 253 bits (647), Expect = 3e-75
Identities = 125/169 (73%), Positives = 145/169 (85%)
Frame = -3
Query: 649 EDIVQVYEELLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVDQKLPSLY 470
++IV++YE LS+LTFNSKP+ITDLTIIAGEQREHG+GIADAIC+RILEVPV+QKLPSLY
Sbjct: 68 DEIVRLYELFLSDLTFNSKPVITDLTIIAGEQREHGQGIADAICSRILEVPVEQKLPSLY 127
Query: 469 LLDSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHTSMRHLFGTWSQVFPSSVLRKIE 290
LLDSIVKNIGR+YVR+F+ LP+VFC AY QVH +MH +MRHLFGTWS VFP+ VLRKIE
Sbjct: 128 LLDSIVKNIGRDYVRHFSAHLPEVFCEAYRQVHPSMHPAMRHLFGTWSTVFPAPVLRKIE 187
Query: 289 DRLQFSSAETQRPAGQANMRNSESPSPRPLHGIHVNPKYLEARRQHQHS 143
RLQFS + Q+ +G + R SE SPRP HGIHVNPKYLEARRQ HS
Sbjct: 188 TRLQFSQSGAQQSSGLTSSRASE--SPRPTHGIHVNPKYLEARRQLGHS 234
>ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Elaeis guineensis]
Length = 1053
Score = 255 bits (651), Expect = 5e-75
Identities = 133/210 (63%), Positives = 157/210 (74%), Gaps = 18/210 (8%)
Frame = -3
Query: 685 IVDRFRALARDNED------------------IVQVYEELLSELTFNSKPIITDLTIIAG 560
I+DRFRA+ R+ E+ IV+ Y+ELLSELTFNSKP+IT+L+IIAG
Sbjct: 63 ILDRFRAMLREREEELRKATGDDPPPPPTAGEIVRFYKELLSELTFNSKPVITELSIIAG 122
Query: 559 EQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYN 380
+ + EGIADAICAR+LEVPVDQKLP LYLLDSIVKNIGREYV+YFA LPKVFC AYN
Sbjct: 123 QHSQFAEGIADAICARVLEVPVDQKLPCLYLLDSIVKNIGREYVKYFAACLPKVFCEAYN 182
Query: 379 QVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPL 200
QV +++MRHLFGTW QVFP SVL KIED LQFS E ++ +G + R+SESPS RP
Sbjct: 183 QVPPTQYSAMRHLFGTWFQVFPLSVLHKIEDELQFSPTENKQSSGITSTRHSESPSSRPS 242
Query: 199 HGIHVNPKYLEARRQHQHSASAGIIDTEKI 110
HGIHVNPKYLEAR+Q +HS S DTE +
Sbjct: 243 HGIHVNPKYLEARQQLKHSTS----DTEHV 268
>ref|XP_015695514.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like,
partial [Oryza brachyantha]
Length = 913
Score = 253 bits (646), Expect = 6e-75
Identities = 131/206 (63%), Positives = 153/206 (74%), Gaps = 1/206 (0%)
Frame = -3
Query: 640 VQVYEELLSELTFNSKPIITDLTIIAGEQRE-HGEGIADAICARILEVPVDQKLPSLYLL 464
V+VY E+LSELTFN KPIIT+LTIIAG+ GIA+AICARI EV DQKLPSLYLL
Sbjct: 1 VRVYVEVLSELTFNCKPIITELTIIAGQHAALAARGIAEAICARICEVSADQKLPSLYLL 60
Query: 463 DSIVKNIGREYVRYFADRLPKVFCGAYNQVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDR 284
DSIVKNIGREYV +FA RL KVFC AY +VH N H +MRHLFGTWSQVFPSSVLR IED
Sbjct: 61 DSIVKNIGREYVGHFAARLQKVFCDAYRKVHRNQHAAMRHLFGTWSQVFPSSVLRGIEDE 120
Query: 283 LQFSSAETQRPAGQANMRNSESPSPRPLHGIHVNPKYLEARRQHQHSASAGIIDTEKIVH 104
LQFS E +RPA +++R SES SPRP HGIHVNPKYLEA++Q +H+ S T
Sbjct: 121 LQFSPLENKRPAAVSDIRQSESISPRPSHGIHVNPKYLEAQQQFKHTTSVHQPITRGNRQ 180
Query: 103 TVDIEEDAVERLATESPKGWSGASPK 26
D+EED + L ++S +GW + K
Sbjct: 181 MTDLEEDQINGLTSKSSRGWPATNLK 206
>ref|XP_019195958.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X4 [Ipomoea nil]
Length = 751
Score = 250 bits (638), Expect = 7e-75
Identities = 135/242 (55%), Positives = 171/242 (70%), Gaps = 23/242 (9%)
Frame = -3
Query: 685 IVDRFRALARDNED------------------IVQVYEELLSELTFNSKPIITDLTIIAG 560
I+DRF+ + ++ ++ +V++YE +LSELTFNSKPIIT+LTIIAG
Sbjct: 39 ILDRFKTMLKEPDEEVRVSLEDGGISPSTMDMVVRLYEIVLSELTFNSKPIITELTIIAG 98
Query: 559 EQREHGEGIADAICARILEVPVDQKLPSLYLLDSIVKNIGREYVRYFADRLPKVFCGAYN 380
EQREHG+GIA+AICARILE PV+ KLPSLYLLDSIVKNIGREY+R+F+ RLP+VFC AY
Sbjct: 99 EQREHGQGIANAICARILEAPVEHKLPSLYLLDSIVKNIGREYIRHFSARLPEVFCEAYR 158
Query: 379 QVHSNMHTSMRHLFGTWSQVFPSSVLRKIEDRLQFSSAETQRPAGQANMRNSESPSPRPL 200
QV NM ++RHLFGTWS VFPSSVLRKIE LQFS + + + +G N+R SE SPRP
Sbjct: 159 QVQPNMFAALRHLFGTWSTVFPSSVLRKIEACLQFSPSTSHQSSGLTNLRASE--SPRPG 216
Query: 199 HGIHVNPKYLEARRQHQHSASAGIIDTEKIVHT-----VDIEEDAVERLATESPKGWSGA 35
HGIHVNPKYLEARRQ ++ + EK+ T + + DAV+ L T + + +
Sbjct: 217 HGIHVNPKYLEARRQLVGHSTINAVGAEKLSSTGRAGLISSDIDAVKLLPTAAARTVRPS 276
Query: 34 SP 29
SP
Sbjct: 277 SP 278