BLASTX nr result
ID: Ophiopogon27_contig00018642
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00018642
(578 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK56065.1| uncharacterized protein A4U43_C10F3780 [Asparagus... 95 3e-21
ref|XP_008788694.1| PREDICTED: TATA box-binding protein-associat... 91 7e-18
ref|XP_009391049.1| PREDICTED: TATA box-binding protein-associat... 89 6e-17
ref|XP_020113039.1| TATA box-binding protein-associated factor R... 77 4e-13
ref|XP_020113036.1| TATA box-binding protein-associated factor R... 77 4e-13
gb|OAY63659.1| TATA box-binding protein-associated factor RNA po... 77 5e-13
ref|XP_020581401.1| TATA box-binding protein-associated factor R... 72 4e-11
ref|XP_020581400.1| TATA box-binding protein-associated factor R... 72 4e-11
ref|XP_020679675.1| TATA box-binding protein-associated factor R... 65 7e-09
gb|PKU82052.1| TATA box-binding protein-associated factor RNA po... 65 7e-09
gb|KMZ74802.1| hypothetical protein ZOSMA_122G00700 [Zostera mar... 62 8e-08
ref|XP_021763385.1| TATA box-binding protein-associated factor R... 58 2e-06
gb|PHU03510.1| hypothetical protein BC332_28761 [Capsicum chinense] 58 2e-06
gb|PHT68960.1| hypothetical protein T459_28447 [Capsicum annuum] 58 2e-06
gb|PHT34906.1| hypothetical protein CQW23_26706 [Capsicum baccatum] 58 2e-06
ref|XP_016547726.1| PREDICTED: TATA box-binding protein-associat... 58 2e-06
ref|XP_016547723.1| PREDICTED: TATA box-binding protein-associat... 58 2e-06
>gb|ONK56065.1| uncharacterized protein A4U43_C10F3780 [Asparagus officinalis]
Length = 159
Score = 94.7 bits (234), Expect = 3e-21
Identities = 60/135 (44%), Positives = 68/135 (50%)
Frame = +1
Query: 172 GCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLADGALYNISYARSYSQSQNPS 351
G + DFY DDD YYCT CGSQSQDLIHT TADE+LLADG LYNI + R+ +
Sbjct: 8 GTSTRDFYLDDDG--YYCTQCGSQSQDLIHTQTADENLLADGTLYNIRHTRTLLSQELDR 65
Query: 352 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAGFDDDEVSEPRDFGSRPSGFGSCSDK 531
T F G DD +SE R FGS G SD+
Sbjct: 66 TLGRRPAAKQENE------------------DFFGVGDDGLSESRGFGS-----GLVSDR 102
Query: 532 EAMADGIRLRYVEGL 576
E + D IR RYVEGL
Sbjct: 103 EELMDVIRFRYVEGL 117
>ref|XP_008788694.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B [Phoenix dactylifera]
Length = 744
Score = 91.3 bits (225), Expect = 7e-18
Identities = 57/145 (39%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Frame = +1
Query: 160 LHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD----GALYNISYARS 327
L+C GC G +F DDG +YC CGSQSQ+++ T ADED+L D GA+Y++ + R+
Sbjct: 24 LYCDGCGGREF-EAGDDGFFYCQQCGSQSQEVVATGCADEDILGDGSGTGAVYSLFHHRA 82
Query: 328 YSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--VKFAGFDDDEVSEPRDFGSR 501
+S PS P + GF DDE SEPRDFGS
Sbjct: 83 RKKSDAPSAAPKISRDELLRSLTQSLSGSARKREEAEPSAARPYGF-DDETSEPRDFGS- 140
Query: 502 PSGFGSCSDKEAMADGIRLRYVEGL 576
G D E +A GIRLRYV+G+
Sbjct: 141 ----GPWPDAETLAGGIRLRYVQGM 161
>ref|XP_009391049.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B [Musa acuminata subsp.
malaccensis]
ref|XP_018679650.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B [Musa acuminata subsp.
malaccensis]
ref|XP_018679651.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B [Musa acuminata subsp.
malaccensis]
ref|XP_018679652.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B [Musa acuminata subsp.
malaccensis]
ref|XP_018679653.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B [Musa acuminata subsp.
malaccensis]
Length = 742
Score = 88.6 bits (218), Expect = 6e-17
Identities = 56/143 (39%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = +1
Query: 160 LHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD----GALYNISYARS 327
L C C G +F DDG YYC CGSQSQD++ T A+ED+ D GALY+I R+
Sbjct: 36 LFCDACGGVEF-DSGDDGFYYCRLCGSQSQDVLDTGYAEEDVFGDAQGSGALYHIHRHRA 94
Query: 328 YSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAGFDDDEVSEPRDFGSRPS 507
SQ+P+ DDE SEPRDFG+
Sbjct: 95 QKHSQDPAAHAISKDDVLRSLSKSLAAGSGGAVKKEQEKALPYGFDDEPSEPRDFGA--- 151
Query: 508 GFGSCSDKEAMADGIRLRYVEGL 576
G C D E +A GIRLRYV+GL
Sbjct: 152 --GPCLDAETLARGIRLRYVQGL 172
>ref|XP_020113039.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B isoform X2 [Ananas comosus]
Length = 720
Score = 77.4 bits (189), Expect = 4e-13
Identities = 55/154 (35%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Frame = +1
Query: 154 RNLHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD----GALYNISYA 321
R LHC GC +F DDG YYC CGSQSQD++ T ADED++ D GALY+ +
Sbjct: 28 RVLHCDGCGASEF-DGGDDGFYYCRHCGSQSQDVVDTGCADEDVVGDGSGRGALYSFFHH 86
Query: 322 RSYSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAG---------FDDDEV 474
RS S +T + G F+++E
Sbjct: 87 RS-RPSAAAATPSAPKLSREDILRSLARSVASLKSGDEEEEERGGKGEGERPYAFEEEEG 145
Query: 475 SEPRDFGSRPSGFGSCSDKEAMADGIRLRYVEGL 576
EPRDFG+ P G +D EA IR RYV+GL
Sbjct: 146 EEPRDFGAGP---GLGADAEAAGAAIRARYVQGL 176
>ref|XP_020113036.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B isoform X1 [Ananas comosus]
ref|XP_020113037.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B isoform X1 [Ananas comosus]
ref|XP_020113038.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B isoform X1 [Ananas comosus]
Length = 721
Score = 77.4 bits (189), Expect = 4e-13
Identities = 55/154 (35%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Frame = +1
Query: 154 RNLHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD----GALYNISYA 321
R LHC GC +F DDG YYC CGSQSQD++ T ADED++ D GALY+ +
Sbjct: 28 RVLHCDGCGASEF-DGGDDGFYYCRHCGSQSQDVVDTGCADEDVVGDGSGRGALYSFFHH 86
Query: 322 RSYSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAG---------FDDDEV 474
RS S +T + G F+++E
Sbjct: 87 RS-RPSAAAATPSAPKLSREDILRSLARSVASLKSGDEEEEERGGKGEGERPYAFEEEEG 145
Query: 475 SEPRDFGSRPSGFGSCSDKEAMADGIRLRYVEGL 576
EPRDFG+ P G +D EA IR RYV+GL
Sbjct: 146 EEPRDFGAGP---GLGADAEAAGAAIRARYVQGL 176
>gb|OAY63659.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B [Ananas comosus]
Length = 1053
Score = 77.4 bits (189), Expect = 5e-13
Identities = 55/154 (35%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Frame = +1
Query: 154 RNLHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD----GALYNISYA 321
R LHC GC +F DDG YYC CGSQSQD++ T ADED++ D GALY+ +
Sbjct: 28 RVLHCDGCGASEF-DGGDDGFYYCRHCGSQSQDVVDTGCADEDVVGDGSGRGALYSFFHH 86
Query: 322 RSYSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAG---------FDDDEV 474
RS S +T + G F+++E
Sbjct: 87 RS-RPSAAAATPSAPKLSREDILRSLARSVASLKSGDEEEEERGGKGEGERPYAFEEEEG 145
Query: 475 SEPRDFGSRPSGFGSCSDKEAMADGIRLRYVEGL 576
EPRDFG+ P G +D EA IR RYV+GL
Sbjct: 146 EEPRDFGAGP---GLGADAEAAGAAIRARYVQGL 176
>ref|XP_020581401.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B isoform X2 [Phalaenopsis equestris]
Length = 652
Score = 71.6 bits (174), Expect = 4e-11
Identities = 49/155 (31%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Frame = +1
Query: 124 ETTQTSPSSHRNLHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD--- 294
E+ Q P +HR+L C C DF DDG +YC+ CGSQSQ++ T +D+
Sbjct: 12 ESPQWKPDNHRSLFCDVCGCEDF-GGGDDGFFYCSQCGSQSQNVADTQADADDIYGGDGG 70
Query: 295 -GALYNISYARSYSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAGFDDDE 471
GA+Y+I + R+ +S + GF+D
Sbjct: 71 VGAIYSIFHHRAKGRSSRSPSKPNFKLPSKEEVLRSLTQAAADSHKKESVASLYGFEDGS 130
Query: 472 VSEPRDFGSRPSGFGSCSDKEAMADGIRLRYVEGL 576
S P+DFGS C D E A RLRYV+GL
Sbjct: 131 -SSPQDFGS-----VDCRDTERAAGETRLRYVQGL 159
>ref|XP_020581400.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B isoform X1 [Phalaenopsis equestris]
Length = 678
Score = 71.6 bits (174), Expect = 4e-11
Identities = 49/155 (31%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Frame = +1
Query: 124 ETTQTSPSSHRNLHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD--- 294
E+ Q P +HR+L C C DF DDG +YC+ CGSQSQ++ T +D+
Sbjct: 12 ESPQWKPDNHRSLFCDVCGCEDF-GGGDDGFFYCSQCGSQSQNVADTQADADDIYGGDGG 70
Query: 295 -GALYNISYARSYSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAGFDDDE 471
GA+Y+I + R+ +S + GF+D
Sbjct: 71 VGAIYSIFHHRAKGRSSRSPSKPNFKLPSKEEVLRSLTQAAADSHKKESVASLYGFEDGS 130
Query: 472 VSEPRDFGSRPSGFGSCSDKEAMADGIRLRYVEGL 576
S P+DFGS C D E A RLRYV+GL
Sbjct: 131 -SSPQDFGS-----VDCRDTERAAGETRLRYVQGL 159
>ref|XP_020679675.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B [Dendrobium catenatum]
Length = 667
Score = 65.1 bits (157), Expect = 7e-09
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +1
Query: 154 RNLHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD---GALYNISYAR 324
R+L C C DF + DDG +YC CGSQSQ+++ T +D+ + GA+YN+ Y R
Sbjct: 12 RSLFCDICGCEDF-KGSDDGFFYCLQCGSQSQNVVDTQADADDVYGEGGVGAVYNMFYHR 70
Query: 325 SYSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAGFDDDEVSEPRDFGSRP 504
+ +S S+ GF+D +S P+DFG+R
Sbjct: 71 AKGRSSLSSSKPNFKLPSKEDILGSRTQSAVDSSKEEPLASHYGFEDG-LSSPQDFGTR- 128
Query: 505 SGFGSCSDKEAMADGIRLRYVEGL 576
D E RLRYV+GL
Sbjct: 129 ----DYKDTEKAVGETRLRYVQGL 148
>gb|PKU82052.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B [Dendrobium catenatum]
Length = 671
Score = 65.1 bits (157), Expect = 7e-09
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +1
Query: 154 RNLHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLLAD---GALYNISYAR 324
R+L C C DF + DDG +YC CGSQSQ+++ T +D+ + GA+YN+ Y R
Sbjct: 12 RSLFCDICGCEDF-KGSDDGFFYCLQCGSQSQNVVDTQADADDVYGEGGVGAVYNMFYHR 70
Query: 325 SYSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKFAGFDDDEVSEPRDFGSRP 504
+ +S S+ GF+D +S P+DFG+R
Sbjct: 71 AKGRSSLSSSKPNFKLPSKEDILGSRTQSAVDSSKEEPLASHYGFEDG-LSSPQDFGTR- 128
Query: 505 SGFGSCSDKEAMADGIRLRYVEGL 576
D E RLRYV+GL
Sbjct: 129 ----DYKDTEKAVGETRLRYVQGL 148
>gb|KMZ74802.1| hypothetical protein ZOSMA_122G00700 [Zostera marina]
Length = 680
Score = 62.0 bits (149), Expect = 8e-08
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Frame = +1
Query: 97 DDDNNWNYQ----ETTQTSPSSHRNLHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHT 264
++ N W+ Q Q PSS + C C DF + +DG +YCT CG QSQDLI T
Sbjct: 5 EERNLWSQQADPNSEAQNQPSS-QGKQCIECGCGDF-ENGNDGFFYCTNCGFQSQDLIET 62
Query: 265 ATADEDLLADG---ALYNISYARSYSQSQNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXX 435
A +E++ G LY++ + YSQS P+
Sbjct: 63 AINEEEIGTLGETAGLYSVRHTARYSQSSQPTQQPFVPTQEDILKALTGSNGDPENDEEA 122
Query: 436 XPVKFA-GFDDDEVSEPRDFGSRPSGFGSCSDKEAMADGIRLRYVEGL 576
+ GF +DE +P + S G D + + +RLRY++GL
Sbjct: 123 NELDMMYGFVEDENLQPGE-----SVAGPVMDPMDVVEAVRLRYLQGL 165
>ref|XP_021763385.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B-like [Chenopodium quinoa]
ref|XP_021763386.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B-like [Chenopodium quinoa]
ref|XP_021763387.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B-like [Chenopodium quinoa]
Length = 693
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Frame = +1
Query: 160 LHCGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLL----ADGALYNISYARS 327
L C C Y D+DDG +YCT C SQ+ D+I A ADED + GA+YN ++ R+
Sbjct: 9 LECSTCGYLGLYMDEDDGRFYCTNCNSQAADIIDNANADEDFIDKGTHGGAIYNAAHRRA 68
>gb|PHU03510.1| hypothetical protein BC332_28761 [Capsicum chinense]
Length = 640
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 166 CGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLL-ADGALYNISYARSYSQSQ 342
C C F D DG +YCT CGSQ+ D+I T D+DL DG +Y+ S R YSQ
Sbjct: 9 CEVCGNISFV-DGGDGFFYCTRCGSQANDIIDTGVDDDDLFNVDGGIYSASQRRQYSQVP 67
Query: 343 NPST 354
P T
Sbjct: 68 KPET 71
>gb|PHT68960.1| hypothetical protein T459_28447 [Capsicum annuum]
Length = 640
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 166 CGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLL-ADGALYNISYARSYSQSQ 342
C C F D DG +YCT CGSQ+ D+I T D+DL DG +Y+ S R YSQ
Sbjct: 9 CEVCGNISFV-DGGDGFFYCTRCGSQANDIIDTGVDDDDLFNVDGGIYSASQRRQYSQVP 67
Query: 343 NPST 354
P T
Sbjct: 68 KPET 71
>gb|PHT34906.1| hypothetical protein CQW23_26706 [Capsicum baccatum]
Length = 640
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 166 CGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLL-ADGALYNISYARSYSQSQ 342
C C F D DG +YCT CGSQ+ D+I T D+DL DG +Y+ S R YSQ
Sbjct: 9 CEVCGNISFV-DGGDGFFYCTRCGSQANDIIDTGVDDDDLFNVDGGIYSASQRRQYSQVP 67
Query: 343 NPST 354
P T
Sbjct: 68 KPET 71
>ref|XP_016547726.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B isoform X2 [Capsicum annuum]
Length = 640
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 166 CGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLL-ADGALYNISYARSYSQSQ 342
C C F D DG +YCT CGSQ+ D+I T D+DL DG +Y+ S R YSQ
Sbjct: 9 CEVCGNISFV-DGGDGFFYCTRCGSQANDIIDTGVDDDDLFNVDGGIYSASQRRQYSQVP 67
Query: 343 NPST 354
P T
Sbjct: 68 KPET 71
>ref|XP_016547723.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B isoform X1 [Capsicum annuum]
ref|XP_016547725.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B isoform X1 [Capsicum annuum]
Length = 641
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 166 CGGCNGHDFYRDDDDGHYYCTGCGSQSQDLIHTATADEDLL-ADGALYNISYARSYSQSQ 342
C C F D DG +YCT CGSQ+ D+I T D+DL DG +Y+ S R YSQ
Sbjct: 9 CEVCGNISFV-DGGDGFFYCTRCGSQANDIIDTGVDDDDLFNVDGGIYSASQRRQYSQVP 67
Query: 343 NPST 354
P T
Sbjct: 68 KPET 71