BLASTX nr result

ID: Ophiopogon27_contig00018563 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00018563
         (652 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK74792.1| uncharacterized protein A4U43_C03F10190 [Asparagu...    60   5e-07
ref|XP_020258376.1| rRNA biogenesis protein RRP5 [Asparagus offi...    60   6e-07

>gb|ONK74792.1| uncharacterized protein A4U43_C03F10190 [Asparagus officinalis]
          Length = 930

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 39/69 (56%), Positives = 40/69 (57%)
 Frame = -2

Query: 324 MVAHGEKTKRKSLNQNPNKLLAPKSQXXXXXXXXXXXXXXXXXXXXPLPTSLLVQDDDPE 145
           M AHGEK K+KS  QNPN L APKSQ                     L TSLLVQDDDPE
Sbjct: 1   MAAHGEK-KKKSQKQNPNHL-APKSQKPFKRSKKEKIPKEPASTDS-LSTSLLVQDDDPE 57

Query: 144 FPRGGGSFL 118
           FPRGGGS L
Sbjct: 58  FPRGGGSVL 66


>ref|XP_020258376.1| rRNA biogenesis protein RRP5 [Asparagus officinalis]
          Length = 1915

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 39/69 (56%), Positives = 40/69 (57%)
 Frame = -2

Query: 324 MVAHGEKTKRKSLNQNPNKLLAPKSQXXXXXXXXXXXXXXXXXXXXPLPTSLLVQDDDPE 145
           M AHGEK K+KS  QNPN L APKSQ                     L TSLLVQDDDPE
Sbjct: 1   MAAHGEK-KKKSQKQNPNHL-APKSQKPFKRSKKEKIPKEPASTDS-LSTSLLVQDDDPE 57

Query: 144 FPRGGGSFL 118
           FPRGGGS L
Sbjct: 58  FPRGGGSVL 66


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