BLASTX nr result
ID: Ophiopogon27_contig00018491
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00018491
(499 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX78425.1| DNA-directed RNA polymerase ii subunit rpb1-like ... 220 2e-71
ref|XP_021275284.1| DNA-directed RNA polymerase II subunit 1-lik... 230 4e-70
gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [... 225 4e-69
emb|CDP14969.1| unnamed protein product [Coffea canephora] >gi|6... 219 7e-69
gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Paras... 223 3e-68
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As... 233 5e-68
dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subt... 220 4e-67
ref|XP_007046584.2| PREDICTED: DNA-directed RNA polymerase II su... 230 7e-67
gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 230 7e-67
ref|XP_022751509.1| DNA-directed RNA polymerase II subunit 1 [Du... 230 7e-67
ref|XP_022550082.1| DNA-directed RNA polymerase II subunit 1-lik... 212 9e-67
gb|KVH98536.1| Aspartate decarboxylase-like domain-containing pr... 223 2e-66
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 229 2e-66
ref|XP_018807320.1| PREDICTED: DNA-directed RNA polymerase II su... 228 3e-66
emb|CDY71816.1| BnaAnng38860D [Brassica napus] 213 3e-66
gb|OIV94865.1| hypothetical protein TanjilG_22062 [Lupinus angus... 228 3e-66
ref|XP_019421112.1| PREDICTED: DNA-directed RNA polymerase II su... 228 3e-66
ref|XP_019421113.1| PREDICTED: DNA-directed RNA polymerase II su... 228 3e-66
gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna ... 223 4e-66
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An... 227 6e-66
>gb|PNX78425.1| DNA-directed RNA polymerase ii subunit rpb1-like protein [Trifolium
pratense]
gb|PNX83098.1| DNA-directed RNA polymerase ii subunit rpb1-like protein [Trifolium
pratense]
Length = 119
Score = 220 bits (560), Expect = 2e-71
Identities = 101/113 (89%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFP+SPAEV+KVR VQFGILSPDEIRQM+VVQ+EHGET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVSKVRMVQFGILSPDEIRQMAVVQIEHGETTERGKPKIGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+KTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKIL 113
>ref|XP_021275284.1| DNA-directed RNA polymerase II subunit 1-like [Herrania umbratica]
Length = 545
Score = 230 bits (586), Expect = 4e-70
Identities = 108/113 (95%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL 113
>gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [Trema orientalis]
Length = 460
Score = 225 bits (574), Expect = 4e-69
Identities = 106/113 (93%), Positives = 110/113 (97%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETM GKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMMGGKPKVAGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKIL 113
>emb|CDP14969.1| unnamed protein product [Coffea canephora]
emb|CDP01841.1| unnamed protein product [Coffea canephora]
Length = 295
Score = 219 bits (559), Expect = 7e-69
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV +EH ET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCMASMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKIL 113
>gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Parasponia andersonii]
Length = 460
Score = 223 bits (568), Expect = 3e-68
Identities = 105/113 (92%), Positives = 109/113 (96%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETM GKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMMGGKPKVAGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKIL 113
>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 233 bits (595), Expect = 5e-68
Identities = 111/113 (98%), Positives = 112/113 (99%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKV GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 113
>dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subterraneum]
Length = 452
Score = 220 bits (560), Expect = 4e-67
Identities = 101/113 (89%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFP+SPAEV+KVR VQFGILSPDEIRQM+VVQ+EHGET ERGKPK+GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVSKVRMVQFGILSPDEIRQMAVVQIEHGETTERGKPKIGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+KTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKIL 113
>ref|XP_007046584.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Theobroma
cacao]
Length = 1861
Score = 230 bits (586), Expect = 7e-67
Identities = 108/113 (95%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL 113
>gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao]
gb|EOX90742.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao]
gb|EOX90743.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao]
Length = 1861
Score = 230 bits (586), Expect = 7e-67
Identities = 108/113 (95%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL 113
>ref|XP_022751509.1| DNA-directed RNA polymerase II subunit 1 [Durio zibethinus]
Length = 1859
Score = 230 bits (586), Expect = 7e-67
Identities = 108/113 (95%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL 113
>ref|XP_022550082.1| DNA-directed RNA polymerase II subunit 1-like [Brassica napus]
Length = 227
Score = 212 bits (539), Expect = 9e-67
Identities = 98/113 (86%), Positives = 106/113 (93%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD RFP+SPAEV+KVR VQFGILSPDEIRQMSV+ VEH ET E+GKPKVGGLSD RLGTI
Sbjct: 1 MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVMHVEHSETTEKGKPKVGGLSDARLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRK+KCETC ANMAECPGHFGHLELAKPM+H+GFMKTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKVKCETCMANMAECPGHFGHLELAKPMYHVGFMKTVLSIMRCVCFNCSKIL 113
>gb|KVH98536.1| Aspartate decarboxylase-like domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 649
Score = 223 bits (568), Expect = 2e-66
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSVV +EHGET ERGKPKV GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL 113
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 229 bits (583), Expect = 2e-66
Identities = 108/113 (95%), Positives = 110/113 (97%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKIL 113
>ref|XP_018807320.1| PREDICTED: DNA-directed RNA polymerase II subunit 1, partial
[Juglans regia]
Length = 1671
Score = 228 bits (582), Expect = 3e-66
Identities = 107/113 (94%), Positives = 110/113 (97%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK+ GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETMERGKPKIAGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL 113
>emb|CDY71816.1| BnaAnng38860D [Brassica napus]
Length = 285
Score = 213 bits (541), Expect = 3e-66
Identities = 98/113 (86%), Positives = 106/113 (93%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD RFP+SPAEV+KVR VQFGILSPDEIRQMSV+ VEH ET E+GKPKVGGLSD RLGTI
Sbjct: 1 MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDTRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRK+KCETC ANMAECPGHFGHLELAKPM+H+GFMKTVL+IMRCVCFNCSKIL
Sbjct: 61 DRKVKCETCMANMAECPGHFGHLELAKPMYHVGFMKTVLSIMRCVCFNCSKIL 113
>gb|OIV94865.1| hypothetical protein TanjilG_22062 [Lupinus angustifolius]
Length = 1836
Score = 228 bits (581), Expect = 3e-66
Identities = 107/113 (94%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKIL 113
>ref|XP_019421112.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Lupinus angustifolius]
Length = 1827
Score = 228 bits (581), Expect = 3e-66
Identities = 107/113 (94%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKIL 113
>ref|XP_019421113.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Lupinus angustifolius]
Length = 1827
Score = 228 bits (581), Expect = 3e-66
Identities = 107/113 (94%), Positives = 111/113 (98%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKIL 113
>gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna angularis]
Length = 725
Score = 223 bits (569), Expect = 4e-66
Identities = 104/113 (92%), Positives = 110/113 (97%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGET ERGKPKVGGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKIL
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKIL 113
>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
Length = 1854
Score = 227 bits (579), Expect = 6e-66
Identities = 107/113 (94%), Positives = 110/113 (97%)
Frame = -3
Query: 341 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 162
MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 161 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKIL 3
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKIL
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKIL 113