BLASTX nr result

ID: Ophiopogon27_contig00018345 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00018345
         (541 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269372.1| uncharacterized protein LOC109844668 isoform...    58   6e-07
ref|XP_020269371.1| insulin-like growth factor 2 mRNA-binding pr...    58   8e-07
ref|XP_020269369.1| uncharacterized protein LOC109844668 isoform...    58   8e-07
ref|XP_008444344.1| PREDICTED: RNA-binding protein 48 isoform X2...    54   7e-06

>ref|XP_020269372.1| uncharacterized protein LOC109844668 isoform X3 [Asparagus
           officinalis]
 ref|XP_020269373.1| uncharacterized protein LOC109844668 isoform X3 [Asparagus
           officinalis]
 gb|ONK67295.1| uncharacterized protein A4U43_C06F18670 [Asparagus officinalis]
          Length = 201

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -2

Query: 318 QEYFSSPSMNQTVQLVREKLDKIKSSTDAAVQAGPASK 205
           +EYF S SMNQTVQLVREKLDKIKSS D  V+AGPASK
Sbjct: 155 KEYFPSSSMNQTVQLVREKLDKIKSSAD-NVEAGPASK 191


>ref|XP_020269371.1| insulin-like growth factor 2 mRNA-binding protein 1 isoform X2
           [Asparagus officinalis]
          Length = 233

 Score = 57.8 bits (138), Expect = 8e-07
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -2

Query: 318 QEYFSSPSMNQTVQLVREKLDKIKSSTDAAVQAGPASK 205
           +EYF S SMNQTVQLVREKLDKIKSS D  V+AGPASK
Sbjct: 187 KEYFPSSSMNQTVQLVREKLDKIKSSAD-NVEAGPASK 223


>ref|XP_020269369.1| uncharacterized protein LOC109844668 isoform X1 [Asparagus
           officinalis]
 ref|XP_020269370.1| uncharacterized protein LOC109844668 isoform X1 [Asparagus
           officinalis]
          Length = 235

 Score = 57.8 bits (138), Expect = 8e-07
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -2

Query: 318 QEYFSSPSMNQTVQLVREKLDKIKSSTDAAVQAGPASK 205
           +EYF S SMNQTVQLVREKLDKIKSS D  V+AGPASK
Sbjct: 189 KEYFPSSSMNQTVQLVREKLDKIKSSAD-NVEAGPASK 225


>ref|XP_008444344.1| PREDICTED: RNA-binding protein 48 isoform X2 [Cucumis melo]
 ref|XP_008444345.1| PREDICTED: RNA-binding protein 48 isoform X2 [Cucumis melo]
          Length = 174

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = -2

Query: 318 QEYFSSPSMNQTVQLVREKLDKIKSSTDAAVQAGPASK 205
           Q+YF+S SMNQTV LVREKLDKI+SS++  +QAGPASK
Sbjct: 128 QDYFASESMNQTVHLVREKLDKIQSSSE-HLQAGPASK 164


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