BLASTX nr result

ID: Ophiopogon27_contig00018277 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00018277
         (831 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK73838.1| WD40 repeat-like protein [Rhizophagus irregularis...    80   4e-13
gb|PKC71592.1| WD40 repeat-like protein [Rhizophagus irregularis]      77   4e-12
dbj|GBC12936.1| compass subunit protein swd1 [Rhizophagus irregu...    77   4e-12
dbj|GBC12937.1| compass subunit protein swd1 [Rhizophagus irregu...    77   4e-12
gb|EXX71079.1| Swd1p [Rhizophagus irregularis DAOM 197198w] >gi|...    77   4e-12

>gb|PKK73838.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY45359.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 488

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = -1

Query: 156 EDELIYLVDSEVESFISTKTLETQQPESSTRSDHSVNNIVICTIGNN 16
           +DELIYLVDSEVESFISTKTLETQQPESSTRSDHS NN++I +  NN
Sbjct: 408 DDELIYLVDSEVESFISTKTLETQQPESSTRSDHSSNNVIIPSSTNN 454


>gb|PKC71592.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 452

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -1

Query: 156 EDELIYLVDSEVESFISTKTLETQQPESSTRSDHSVNNIVICTIGNN 16
           +DELIYLVDSEVESFISTKTLETQQPESSTRSD S NN++I +  NN
Sbjct: 372 DDELIYLVDSEVESFISTKTLETQQPESSTRSDQSSNNVIIPSSTNN 418


>dbj|GBC12936.1| compass subunit protein swd1 [Rhizophagus irregularis DAOM 181602]
          Length = 459

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -1

Query: 156 EDELIYLVDSEVESFISTKTLETQQPESSTRSDHSVNNIVICTIGNN 16
           +DELIYLVDSEVESFISTKTLETQQPESSTRSD S NN++I +  NN
Sbjct: 379 DDELIYLVDSEVESFISTKTLETQQPESSTRSDQSSNNVIIPSSTNN 425


>dbj|GBC12937.1| compass subunit protein swd1 [Rhizophagus irregularis DAOM 181602]
          Length = 468

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -1

Query: 156 EDELIYLVDSEVESFISTKTLETQQPESSTRSDHSVNNIVICTIGNN 16
           +DELIYLVDSEVESFISTKTLETQQPESSTRSD S NN++I +  NN
Sbjct: 388 DDELIYLVDSEVESFISTKTLETQQPESSTRSDQSSNNVIIPSSTNN 434


>gb|EXX71079.1| Swd1p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC12935.1| COMPASS subunit protein SWD1 [Rhizophagus irregularis DAOM 181602]
 gb|PKC11955.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY18382.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|POG67904.1| hypothetical protein GLOIN_2v1481188 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 488

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -1

Query: 156 EDELIYLVDSEVESFISTKTLETQQPESSTRSDHSVNNIVICTIGNN 16
           +DELIYLVDSEVESFISTKTLETQQPESSTRSD S NN++I +  NN
Sbjct: 408 DDELIYLVDSEVESFISTKTLETQQPESSTRSDQSSNNVIIPSSTNN 454


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