BLASTX nr result

ID: Ophiopogon27_contig00017961 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00017961
         (490 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261618.1| U11/U12 small nuclear ribonucleoprotein 25 k...    55   3e-06

>ref|XP_020261618.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X1
           [Asparagus officinalis]
 ref|XP_020261619.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X1
           [Asparagus officinalis]
 ref|XP_020261620.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X1
           [Asparagus officinalis]
 ref|XP_020261621.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X1
           [Asparagus officinalis]
 ref|XP_020261622.1| U11/U12 small nuclear ribonucleoprotein 25 kDa protein isoform X1
           [Asparagus officinalis]
 gb|ONK72609.1| uncharacterized protein A4U43_C04F21190 [Asparagus officinalis]
          Length = 172

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 29/47 (61%), Positives = 30/47 (63%)
 Frame = -3

Query: 488 INDDSLLSAYGIHNNSKVHFTPYVMSREFQXXXXXXXXXXXHGLRKR 348
           IND +LLS YGI NNSKVHF PYVMSRE Q           HGL KR
Sbjct: 125 INDSALLSDYGIRNNSKVHFIPYVMSRELQKHSRRKKHRFFHGLSKR 171


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