BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00017622
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagu...   132   7e-33
ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase...   132   7e-33
ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA...    68   4e-10
ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subuni...    63   2e-08

>gb|ONK63108.1| uncharacterized protein A4U43_C07F11500 [Asparagus officinalis]
          Length = 705

 Score =  132 bits (333), Expect = 7e-33
 Identities = 77/161 (47%), Positives = 96/161 (59%)
 Frame = +2

Query: 2   AKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFQSTVIIGDSVNAVAPSTSS 181
           AKQLE+VV+AE                           +DFQST+I GD VN  + ++S+
Sbjct: 282 AKQLEEVVLAEKKKKKVKKSKSSSSNARKIASGRKNDKIDFQSTIITGDLVNVTSGTSST 341

Query: 182 VSFFGSGEQSAKESEDDAHIKNKTESISHIESDGVMCWEGANLEKKEASQKTGFKSSLKT 361
            S   S + S      + H+KNKTE + + ESD VM   G ++EKK  SQ+   KSSLKT
Sbjct: 342 SSLDSSSKDSV-----NVHVKNKTEPLGYGESDDVMLSGGVSMEKKHVSQENELKSSLKT 396

Query: 362 SRSKGGNRSVRWADERNSEALENKKDIPQVMQEEDPDISLR 484
           SRSKGGNRSV+WADE   E LE+KKD PQVM+EED D SLR
Sbjct: 397 SRSKGGNRSVKWADEVILEVLEDKKDTPQVMREEDLDSSLR 437


>ref|XP_020274285.1| LOW QUALITY PROTEIN: putative RNA polymerase II subunit B1 CTD
           phosphatase RPAP2 homolog [Asparagus officinalis]
          Length = 736

 Score =  132 bits (333), Expect = 7e-33
 Identities = 77/161 (47%), Positives = 96/161 (59%)
 Frame = +2

Query: 2   AKQLEDVVIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXLDFQSTVIIGDSVNAVAPSTSS 181
           AKQLE+VV+AE                           +DFQST+I GD VN  + ++S+
Sbjct: 313 AKQLEEVVLAEKKKKKVKKSKSSSSNARKIASGRKNDKIDFQSTIITGDLVNVTSGTSST 372

Query: 182 VSFFGSGEQSAKESEDDAHIKNKTESISHIESDGVMCWEGANLEKKEASQKTGFKSSLKT 361
            S   S + S      + H+KNKTE + + ESD VM   G ++EKK  SQ+   KSSLKT
Sbjct: 373 SSLDSSSKDSV-----NVHVKNKTEPLGYGESDDVMLSGGVSMEKKHVSQENELKSSLKT 427

Query: 362 SRSKGGNRSVRWADERNSEALENKKDIPQVMQEEDPDISLR 484
           SRSKGGNRSV+WADE   E LE+KKD PQVM+EED D SLR
Sbjct: 428 SRSKGGNRSVKWADEVILEVLEDKKDTPQVMREEDLDSSLR 468


>ref|XP_008781193.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA polymerase II subunit
           B1 CTD phosphatase RPAP2 homolog [Phoenix dactylifera]
          Length = 689

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 27/150 (18%)
 Frame = +2

Query: 116 LDFQSTVIIGDSVNAV---------------------APSTSSVSFFGSGEQSAKESEDD 232
           +DF+S +++GD   A                      AP  SSV+     EQ      ++
Sbjct: 278 VDFRSVIVMGDDAQASCVSTQNHSEQFNFTSPMIIDQAPKMSSVTAQNRPEQLDNNLNNE 337

Query: 233 AHIKNKTESISHIESDGVMCWEGANLEKKEASQKTGFKSSLKTSRSKGGNRSVRWADERN 412
            H++N+ E   ++E+          LEKKE   +T  KSSLK S SK G R+V+WADE  
Sbjct: 338 VHLENEIE---YLETAQKELKYRVKLEKKE---ETALKSSLKASGSKVGRRTVKWADEEK 391

Query: 413 SEALENKKDIPQ------VMQEEDPDISLR 484
            +ALE +KD P+         E+D D SLR
Sbjct: 392 DKALEERKDGPESNISTGASHEDDDDSSLR 421


>ref|XP_009389521.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Musa acuminata subsp. malaccensis]
          Length = 668

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 16/139 (11%)
 Frame = +2

Query: 116 LDFQSTVIIGDSV----NAVAPST-----SSVSFFGSGEQSAKESEDDAHIKNKTESISH 268
           ++F ST+I+G+ V    +A A +T     +S +F G  E    E +   H+++ T S   
Sbjct: 277 VEFMSTIIVGEQVPPGSSAAAQNTPKLDYTSTTFVGDKESLISELDSGIHMESTTGSQK- 335

Query: 269 IESDGVMCWEGANLEKKEASQKTG-FKSSLKTSRSKGGNRSVRWADERNSEALENKKD-- 439
                 + +E    EKK +  K    KSSLKTSRSK   RSV+WADER + A E +KD  
Sbjct: 336 ------VAYE---FEKKVSMDKGSVLKSSLKTSRSKNAGRSVKWADERENMAQEERKDDL 386

Query: 440 ----IPQVMQEEDPDISLR 484
                P+  Q ED D SLR
Sbjct: 387 KSSTKPEESQVED-DSSLR 404