BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00017509
         (631 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK65675.1| uncharacterized protein A4U43_C07F39540 [Asparagu...    81   8e-15
ref|XP_020274223.1| LOW QUALITY PROTEIN: 5'-3' exoribonuclease 3...    78   4e-13
ref|XP_020247557.1| 5'-3' exoribonuclease 3 isoform X2 [Asparagu...    60   5e-07
ref|XP_020247549.1| 5'-3' exoribonuclease 3 isoform X1 [Asparagu...    60   5e-07

>gb|ONK65675.1| uncharacterized protein A4U43_C07F39540 [Asparagus officinalis]
          Length = 287

 Score = 81.3 bits (199), Expect = 8e-15
 Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
 Frame = -2

Query: 630 GPYVQNPPPRAYGGYVQNPPPRAYGAQQWQPRHGAGRGVPSNPQ-APPGRAYGNNHQE-G 457
           GPYVQN P R YGGY      + YGAQQWQP HG+GRG P N Q +P GR+YGNN+ E G
Sbjct: 210 GPYVQNEP-RVYGGY------QGYGAQQWQPWHGSGRGAPLNAQLSPVGRSYGNNNNEQG 262

Query: 456 NNRYSALH 433
           NNR+S+L+
Sbjct: 263 NNRFSSLN 270


>ref|XP_020274223.1| LOW QUALITY PROTEIN: 5'-3' exoribonuclease 3-like [Asparagus
            officinalis]
          Length = 1123

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
 Frame = -2

Query: 630  GPYVQNPPPRAYGGYVQNPPPRAYGAQQWQPRHGAGRGVPSNPQ-APPGRAYG-NNHQEG 457
            GPYVQN P R YGGY      + YGAQQWQP HG+GRG P + Q +P GR+YG NN+Q+G
Sbjct: 1045 GPYVQNEP-RVYGGY------QGYGAQQWQPWHGSGRGAPLSAQLSPVGRSYGNNNNQQG 1097

Query: 456  NNRYSA 439
            NNR+S+
Sbjct: 1098 NNRFSS 1103


>ref|XP_020247557.1| 5'-3' exoribonuclease 3 isoform X2 [Asparagus officinalis]
          Length = 1066

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 35/75 (46%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
 Frame = -2

Query: 627  PYVQNPPPRAY----GGYVQNPPPRAYGA------QQWQPRHGAGRGVPSNPQAPPGRAY 478
            PY QNPP  A     G YVQNPPP  YG+      QQWQPR+G GR    N + P     
Sbjct: 989  PYGQNPPHAAQIPVAGPYVQNPPPTVYGSHRTYETQQWQPRYGTGRAYDDNRRQP----- 1043

Query: 477  GNNHQEGNNRYSALH 433
                   NNRYSAL+
Sbjct: 1044 ------NNNRYSALN 1052


>ref|XP_020247549.1| 5'-3' exoribonuclease 3 isoform X1 [Asparagus officinalis]
          Length = 1067

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 35/75 (46%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
 Frame = -2

Query: 627  PYVQNPPPRAY----GGYVQNPPPRAYGA------QQWQPRHGAGRGVPSNPQAPPGRAY 478
            PY QNPP  A     G YVQNPPP  YG+      QQWQPR+G GR    N + P     
Sbjct: 990  PYGQNPPHAAQIPVAGPYVQNPPPTVYGSHRTYETQQWQPRYGTGRAYDDNRRQP----- 1044

Query: 477  GNNHQEGNNRYSALH 433
                   NNRYSAL+
Sbjct: 1045 ------NNNRYSALN 1053