BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00016809
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020275448.1| RNA-binding protein CP33, chloroplastic [Asp...    69   7e-11
gb|OVA17133.1| RNA recognition motif domain [Macleaya cordata]         65   3e-09
ref|XP_010247638.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    62   2e-08
ref|XP_008442930.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    62   2e-08
gb|EEF38281.1| ribonucleoprotein, chloroplast, putative [Ricinus...    59   2e-08
ref|XP_018851191.1| PREDICTED: RNA-binding protein CP33, chlorop...    59   2e-08
ref|XP_023760908.1| 33 kDa ribonucleoprotein, chloroplastic [Lac...    62   3e-08
emb|CDP10586.1| unnamed protein product [Coffea canephora]             59   1e-07
ref|XP_021771263.1| 33 kDa ribonucleoprotein, chloroplastic-like...    60   1e-07
ref|XP_022934919.1| 33 kDa ribonucleoprotein, chloroplastic [Cuc...    60   1e-07
ref|XP_022983024.1| 33 kDa ribonucleoprotein, chloroplastic [Cuc...    60   1e-07
ref|XP_023527627.1| 33 kDa ribonucleoprotein, chloroplastic [Cuc...    60   1e-07
gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlise...    59   1e-07
gb|POE61243.1| 33 kda ribonucleoprotein, chloroplastic [Quercus ...    59   2e-07
gb|PON42095.1| Splicing factor-like protein [Parasponia andersonii]    59   2e-07
ref|XP_018851178.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...    59   2e-07
gb|KVH90552.1| Nucleotide-binding, alpha-beta plait [Cynara card...    58   2e-07
ref|XP_015577819.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...    59   3e-07
ref|XP_022151379.1| RNA-binding protein CP33, chloroplastic [Mom...    59   3e-07
ref|XP_021769597.1| 33 kDa ribonucleoprotein, chloroplastic-like...    59   3e-07

>ref|XP_020275448.1| RNA-binding protein CP33, chloroplastic [Asparagus officinalis]
          Length = 313

 Score = 68.9 bits (167), Expect = 7e-11
 Identities = 30/46 (65%), Positives = 40/46 (86%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAAT 140
           RG+GF+TF S ED Q+A++ +NGKEV+GRPLRLN+AS+R+S  AAT
Sbjct: 260 RGFGFVTFVSEEDVQNAMEAMNGKEVQGRPLRLNLASQRASNTAAT 305


>gb|OVA17133.1| RNA recognition motif domain [Macleaya cordata]
          Length = 321

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAATL*GHRSVA*REGHD 182
           RG+GF+TF+S EDAQSAI  LNG  VEGRPLRLN+A+ R++T ++ +    S    + H+
Sbjct: 253 RGFGFVTFSSAEDAQSAIDALNGVAVEGRPLRLNLAAERANTTSSQVEETSSERETDIHE 312

Query: 183 N 185
           N
Sbjct: 313 N 313


>ref|XP_010247638.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Nelumbo
           nucifera]
          Length = 319

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 27/41 (65%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSS 125
           RG+GF+TFAS E+AQSA+++++G EVEGRPLRLN+A+ R+S
Sbjct: 253 RGFGFVTFASAEEAQSALESMDGVEVEGRPLRLNMAAERAS 293


>ref|XP_008442930.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cucumis melo]
          Length = 321

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 26/45 (57%), Positives = 39/45 (86%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAA 137
           RG+GF++F + EDA+SA++++NG EVEGRPLRLN+A+ R+ T+ A
Sbjct: 257 RGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAERAPTSPA 301


>gb|EEF38281.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
          Length = 107

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 26/45 (57%), Positives = 37/45 (82%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAA 137
           RG+GF++F S EDA++A+ ++NG EVEGRPLRLN+A+ R+ T  A
Sbjct: 43  RGFGFVSFESAEDAEAALNSMNGVEVEGRPLRLNLAADRARTPPA 87


>ref|XP_018851191.1| PREDICTED: RNA-binding protein CP33, chloroplastic-like [Juglans
           regia]
 ref|XP_018851192.1| PREDICTED: RNA-binding protein CP33, chloroplastic-like [Juglans
           regia]
 ref|XP_018851193.1| PREDICTED: RNA-binding protein CP33, chloroplastic-like [Juglans
           regia]
          Length = 124

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSST 128
           RG+GF++F + EDA+SA+  +NG EVEGRPLRLN A+ RSS+
Sbjct: 58  RGFGFVSFETAEDAESALNAMNGVEVEGRPLRLNSAAERSSS 99


>ref|XP_023760908.1| 33 kDa ribonucleoprotein, chloroplastic [Lactuca sativa]
 gb|PLY87683.1| hypothetical protein LSAT_6X34901 [Lactuca sativa]
          Length = 339

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAATL*GHRS 158
           RG+GF+TF+SPE A+SA+  +NG EVEGRPLRLN+A  +   + +T  G  S
Sbjct: 273 RGFGFVTFSSPEAAESALNAMNGLEVEGRPLRLNLAEGKGDVSRSTRAGRSS 324


>emb|CDP10586.1| unnamed protein product [Coffea canephora]
          Length = 189

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRS 122
           RG+GFI+FAS E+  SA++ +NG EVEGRPLRLN+A +RS
Sbjct: 134 RGFGFISFASAEEVDSALEAMNGVEVEGRPLRLNLAQQRS 173


>ref|XP_021771263.1| 33 kDa ribonucleoprotein, chloroplastic-like [Chenopodium quinoa]
          Length = 315

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 27/43 (62%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTN 131
           RG+GFITF++ E A+SA+ T+NG E+EGRPLRLN+AS R+ +N
Sbjct: 264 RGFGFITFSTAEAAESALTTMNGVELEGRPLRLNMASDRARSN 306


>ref|XP_022934919.1| 33 kDa ribonucleoprotein, chloroplastic [Cucurbita moschata]
 ref|XP_022934920.1| 33 kDa ribonucleoprotein, chloroplastic [Cucurbita moschata]
          Length = 327

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 26/45 (57%), Positives = 38/45 (84%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAA 137
           RG+GF++F + EDA+SA+ ++NG EVEGRPLRLN+A+ R+ T+ A
Sbjct: 263 RGFGFVSFETAEDAESALDSMNGVEVEGRPLRLNMAADRAPTSPA 307


>ref|XP_022983024.1| 33 kDa ribonucleoprotein, chloroplastic [Cucurbita maxima]
          Length = 328

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 26/45 (57%), Positives = 38/45 (84%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAA 137
           RG+GF++F + EDA+SA+ ++NG EVEGRPLRLN+A+ R+ T+ A
Sbjct: 264 RGFGFVSFETAEDAESALDSMNGVEVEGRPLRLNMAADRAPTSPA 308


>ref|XP_023527627.1| 33 kDa ribonucleoprotein, chloroplastic [Cucurbita pepo subsp.
           pepo]
          Length = 331

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 26/45 (57%), Positives = 38/45 (84%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAA 137
           RG+GF++F + EDA+SA+ ++NG EVEGRPLRLN+A+ R+ T+ A
Sbjct: 267 RGFGFVSFETAEDAESALDSMNGVEVEGRPLRLNMAADRAPTSPA 311


>gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlisea aurea]
          Length = 204

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 23/43 (53%), Positives = 38/43 (88%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTN 131
           RG+GF+TF+S ++A SA+ T+NG E+EGRPL+L++A +R++T+
Sbjct: 156 RGFGFVTFSSSQEANSALNTMNGTEIEGRPLKLDLAEQRTATS 198


>gb|POE61243.1| 33 kda ribonucleoprotein, chloroplastic [Quercus suber]
          Length = 200

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/42 (57%), Positives = 37/42 (88%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSST 128
           RG+GF++F + EDA+SA+ ++NG EVEGRPLRLN+A++R+ +
Sbjct: 134 RGFGFVSFETAEDAESALSSMNGVEVEGRPLRLNMAAQRAQS 175


>gb|PON42095.1| Splicing factor-like protein [Parasponia andersonii]
          Length = 324

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 26/41 (63%), Positives = 35/41 (85%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSS 125
           RG+GF++F + E AQSA+  +NG EVEGRPLRLN+AS+R+S
Sbjct: 259 RGFGFVSFETAEAAQSALDAMNGVEVEGRPLRLNIASQRAS 299


>ref|XP_018851178.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Juglans regia]
 ref|XP_018851179.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Juglans regia]
 ref|XP_018851180.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Juglans regia]
 ref|XP_018851181.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Juglans regia]
          Length = 326

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSST 128
           RG+GF++F + EDA+SA+  +NG EVEGRPLRLN A+ RSS+
Sbjct: 260 RGFGFVSFETAEDAESALNAMNGVEVEGRPLRLNSAAERSSS 301


>gb|KVH90552.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 200

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 25/46 (54%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAAT 140
           RG+GF+TF+S E A+SA+  +NGKE+EGRPLRLN+A+  S +  ++
Sbjct: 139 RGFGFVTFSSVEAAESALNAMNGKEIEGRPLRLNLAADASRSGRSS 184


>ref|XP_015577819.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein CP33,
           chloroplastic [Ricinus communis]
          Length = 304

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 26/45 (57%), Positives = 37/45 (82%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAA 137
           RG+GF++F S EDA++A+ ++NG EVEGRPLRLN+A+ R+ T  A
Sbjct: 240 RGFGFVSFESAEDAEAALNSMNGVEVEGRPLRLNLAADRARTPPA 284


>ref|XP_022151379.1| RNA-binding protein CP33, chloroplastic [Momordica charantia]
          Length = 317

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 25/45 (55%), Positives = 38/45 (84%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTNAA 137
           RG+GF++F + EDA+SA+ ++NG EVEGRPLRLN+A+ ++ T+ A
Sbjct: 253 RGFGFVSFETAEDAESAMNSMNGVEVEGRPLRLNIAAGQAPTSPA 297


>ref|XP_021769597.1| 33 kDa ribonucleoprotein, chloroplastic-like [Chenopodium quinoa]
          Length = 317

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 26/43 (60%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   RGYGFITFASPEDAQSAIQTLNGKEVEGRPLRLNVASRRSSTN 131
           RG+GFITF++ + A+SA+ T+NG E+EGRPLRLN+AS R+ +N
Sbjct: 266 RGFGFITFSTADAAESALTTMNGVELEGRPLRLNMASDRARSN 308