BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00016791
         (971 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As...   578   0.0  
ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Se...   542   0.0  
gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [...   526   0.0  
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial...   561   0.0  
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso...   563   0.0  
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso...   563   0.0  
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su...   563   0.0  
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su...   563   0.0  
gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Paras...   523   0.0  
ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [An...   560   0.0  
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su...   559   0.0  
ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [De...   559   0.0  
dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subt...   518   0.0  
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos...   556   0.0  
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...   548   0.0  
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su...   553   e-180
gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus...   528   e-180
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...   543   e-176
ref|XP_004972809.1| DNA-directed RNA polymerase II subunit 1 [Se...   542   e-176
ref|XP_015649819.1| PREDICTED: DNA-directed RNA polymerase II su...   542   e-176

>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
 gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
          Length = 1843

 Score =  578 bits (1489), Expect = 0.0
 Identities = 290/317 (91%), Positives = 292/317 (92%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKV GLSDPRLGTI
Sbjct: 1   MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61  DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEDDVR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKKKCA             DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181 IDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
 gb|KQL00755.1| hypothetical protein SETIT_013247mg [Setaria italica]
          Length = 860

 Score =  542 bits (1397), Expect = 0.0
 Identities = 270/317 (85%), Positives = 285/317 (89%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV+Q+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61  DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKK CA             DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           +DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 300 TEFAQLLQFHIATYFDN 316


>gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [Trema orientalis]
          Length = 460

 Score =  526 bits (1356), Expect = 0.0
 Identities = 264/320 (82%), Positives = 282/320 (88%), Gaps = 3/320 (0%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETM  GKPKV GLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMMGGKPKVAGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DEED +
Sbjct: 61  DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEEDHK 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLK+I DACK+K KC              +EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKC-EGGDEIDVQGQESEEPVKKSRGGCGAQQPKLT 179

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSE---DDLTHQLAMIIRHNENLRRQERNGAPA 62
           RPDWMILQVL        PSVMMDTS+RSE   DDLTHQLAMIIRHNENLRRQERNG+PA
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEASFDDLTHQLAMIIRHNENLRRQERNGSPA 299

Query: 61  HIITEFAQLLQFHIATYFDN 2
           HII+EFAQLLQFHIATYFDN
Sbjct: 300 HIISEFAQLLQFHIATYFDN 319


>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
          Length = 1705

 Score =  561 bits (1447), Expect = 0.0
 Identities = 279/317 (88%), Positives = 288/317 (90%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPK+RLKRIYDACK+KKKCA             +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
           equestris]
          Length = 1827

 Score =  563 bits (1452), Expect = 0.0
 Identities = 282/317 (88%), Positives = 287/317 (90%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEEDAR
Sbjct: 61  DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKKKCA             +EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
           equestris]
          Length = 1827

 Score =  563 bits (1452), Expect = 0.0
 Identities = 282/317 (88%), Positives = 287/317 (90%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAEC GHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEEDAR
Sbjct: 61  DRKMKCETCMANMAECSGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDAR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKKKCA             +EPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQSQQDSEEPVKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
           dactylifera]
          Length = 1842

 Score =  563 bits (1452), Expect = 0.0
 Identities = 279/317 (88%), Positives = 289/317 (91%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPK+RLKRIYDACK+KKKCA             +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
           guineensis]
          Length = 1842

 Score =  563 bits (1450), Expect = 0.0
 Identities = 279/317 (88%), Positives = 289/317 (91%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPK+RLKRIYDACK+KKKCA             +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDCLLLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Parasponia andersonii]
          Length = 460

 Score =  523 bits (1347), Expect = 0.0
 Identities = 262/320 (81%), Positives = 281/320 (87%), Gaps = 3/320 (0%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD+RFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETM  GKPKV GLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMMGGKPKVAGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DE+D +
Sbjct: 61  DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLK+I DACK+K KC              +EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKAKC-EGGDEIDVQGQESEEPVKKSRGGCGAQQPKLT 179

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 180 IDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYA 239

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSE---DDLTHQLAMIIRHNENLRRQERNGAPA 62
           RPDWMILQVL        PSVMMDTS+RSE   DDLTHQLAMIIRHNENLRRQERNG+PA
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEASFDDLTHQLAMIIRHNENLRRQERNGSPA 299

Query: 61  HIITEFAQLLQFHIATYFDN 2
           HII+EFAQLLQFHIATYFDN
Sbjct: 300 HIISEFAQLLQFHIATYFDN 319


>ref|XP_020113244.1| DNA-directed RNA polymerase II subunit 1 [Ananas comosus]
 gb|OAY68410.1| DNA-directed RNA polymerase II subunit rpb1 [Ananas comosus]
          Length = 1854

 Score =  560 bits (1443), Expect = 0.0
 Identities = 279/317 (88%), Positives = 288/317 (90%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MDMRFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKK+CA             DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           +DGMKMVAE+KA KKKSDD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPKYA
Sbjct: 181 VDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
           subsp. malaccensis]
          Length = 1832

 Score =  559 bits (1441), Expect = 0.0
 Identities = 278/317 (87%), Positives = 287/317 (90%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD RFP+SPAEVAKVRTVQFGILSPDEIRQMSVVQ+EHGETMERGKPK  GLSDPRLGTI
Sbjct: 1   MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADEED R
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKKKC+             +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKMVAEYKAPKKKSD+ EQLPEP ERKQ LSAERVLSVLKRISDEDCLLLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           +EFAQLLQFHIATYFDN
Sbjct: 301 SEFAQLLQFHIATYFDN 317


>ref|XP_020676053.1| DNA-directed RNA polymerase II subunit 1 [Dendrobium catenatum]
          Length = 1841

 Score =  559 bits (1441), Expect = 0.0
 Identities = 278/317 (87%), Positives = 286/317 (90%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADEED R
Sbjct: 61  DRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKKKCA             +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           +DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 VDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subterraneum]
          Length = 452

 Score =  518 bits (1335), Expect = 0.0
 Identities = 257/319 (80%), Positives = 282/319 (88%), Gaps = 2/319 (0%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD+RFP+SPAEV+KVR VQFGILSPDEIRQM+VVQ+EHGET ERGKPK+GGLSDPRLGTI
Sbjct: 1   MDIRFPFSPAEVSKVRMVQFGILSPDEIRQMAVVQIEHGETTERGKPKIGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE D +
Sbjct: 61  DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADENDHK 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQAL+I+NPKNRL++I DACK+K KC              +EPVKK RGGCGAQQP IT
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKC-EGGDDIDLPGQDTEEPVKKSRGGCGAQQPKIT 179

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           I+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYA
Sbjct: 180 IEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYA 239

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSE--DDLTHQLAMIIRHNENLRRQERNGAPAH 59
           RPDW+ILQVL        PSVMMDTS+RSE  DDLTHQLAMIIRHNENL+RQERNG+PAH
Sbjct: 240 RPDWLILQVLPIPPPPVRPSVMMDTSSRSEASDDLTHQLAMIIRHNENLKRQERNGSPAH 299

Query: 58  IITEFAQLLQFHIATYFDN 2
           II+EFAQLLQFHIATYFDN
Sbjct: 300 IISEFAQLLQFHIATYFDN 318


>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
          Length = 1806

 Score =  556 bits (1433), Expect = 0.0
 Identities = 275/317 (86%), Positives = 285/317 (89%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           M+ RF YSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   METRFAYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKAGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D R
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEDDTR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRL+RIYDACKSKKKCA             +EP+KK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLRRIYDACKSKKKCAGGDDIDVQGQQDSEEPIKKSRGGCGAQQPNIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLKRISDEDC LLGLNPKYA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCQLLGLNPKYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAM+IRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1516

 Score =  548 bits (1413), Expect = 0.0
 Identities = 279/339 (82%), Positives = 287/339 (84%), Gaps = 19/339 (5%)
 Frame = -2

Query: 961  SYTMDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRL 782
            S  MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRL
Sbjct: 41   SVDMDIRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRL 100

Query: 781  GTIDRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADE- 605
            GTIDRKMKCETC ANMAEC GHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADE 
Sbjct: 101  GTIDRKMKCETCMANMAECSGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEL 160

Query: 604  ------------------EDARFKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXX 479
                              ED RFKQALKIRNPKNRLKRIYDACKSKKKCA          
Sbjct: 161  YLFSCLAISLLTSIAFSQEDTRFKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDLQGQ 220

Query: 478  XXXDEPVKKIRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERV 299
               +EP+KK RGGCGAQQPNIT+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERV
Sbjct: 221  QDSEEPIKKSRGGCGAQQPNITVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERV 280

Query: 298  LSVLKRISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLA 119
            LSVLKRISDEDC LLGLNPKYARPDWMILQVL        PSVMMDTS+RSEDDLTHQLA
Sbjct: 281  LSVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLA 340

Query: 118  MIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 2
            MIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDN
Sbjct: 341  MIIRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDN 379


>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
           guineensis]
          Length = 1842

 Score =  553 bits (1426), Expect = e-180
 Identities = 274/317 (86%), Positives = 287/317 (90%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV Q+EHGETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLAIMRCVCFNCSKILADE+DAR
Sbjct: 61  DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPK+RLKRI DACKSKKKCA             +EP+KK RGGCG+QQP IT
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           IDGMKMVAEYKAPKKKSDD +QLPEPVERKQ LSA+RVLSVLKRISDEDC+LLGLNP+YA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 301 TEFAQLLQFHIATYFDN 317


>gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus suber]
          Length = 836

 Score =  528 bits (1359), Expect = e-180
 Identities = 262/315 (83%), Positives = 280/315 (88%)
 Frame = -2

Query: 946 MRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTIDR 767
           MRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQVEH ETMERGKPKVGGLSDPRLGTIDR
Sbjct: 1   MRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQVEHSETMERGKPKVGGLSDPRLGTIDR 60

Query: 766 KMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDARFK 587
           K+KCETCTANMAECPGHFGHLELAKPMFHIGF+KTVL+IMR VCFNCSKILADEED +FK
Sbjct: 61  KLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRSVCFNCSKILADEEDHKFK 120

Query: 586 QALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNITID 407
           QALKI+NPKNRLK+I DACK+K KC              ++P KK RGGCGAQQP +TI+
Sbjct: 121 QALKIKNPKNRLKKILDACKNKTKC-EGGDELEVQGQDSEQPAKKSRGGCGAQQPKLTIE 179

Query: 406 GMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYARP 227
           GMKM+AEYKA +KKSDD EQLPEPVERKQ L+AERVLS+LKRISDEDC LLGLNPKYARP
Sbjct: 180 GMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSILKRISDEDCQLLGLNPKYARP 239

Query: 226 DWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITE 47
           DWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII+E
Sbjct: 240 DWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGAPAHIISE 299

Query: 46  FAQLLQFHIATYFDN 2
           FAQLLQFHIATYFDN
Sbjct: 300 FAQLLQFHIATYFDN 314


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza
           brachyantha]
          Length = 1855

 Score =  543 bits (1398), Expect = e-176
 Identities = 271/317 (85%), Positives = 285/317 (89%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61  DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKK CA             DEPVK+ RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNIT 179

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           +DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180 VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 300 TEFAQLLQFHIATYFDN 316


>ref|XP_004972809.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
 gb|KQL00756.1| hypothetical protein SETIT_013115mg [Setaria italica]
          Length = 1852

 Score =  542 bits (1397), Expect = e-176
 Identities = 270/317 (85%), Positives = 285/317 (89%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV+Q+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61  DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKK CA             DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           +DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 300 TEFAQLLQFHIATYFDN 316


>ref|XP_015649819.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza sativa
           Japonica Group]
          Length = 1855

 Score =  542 bits (1397), Expect = e-176
 Identities = 271/317 (85%), Positives = 285/317 (89%)
 Frame = -2

Query: 952 MDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVGGLSDPRLGTI 773
           MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSDPRLGTI
Sbjct: 1   MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60

Query: 772 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEEDAR 593
           D+K+KCETC A MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61  DQKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120

Query: 592 FKQALKIRNPKNRLKRIYDACKSKKKCAXXXXXXXXXXXXXDEPVKKIRGGCGAQQPNIT 413
           FKQALKIRNPKNRLKRIYDACKSKK CA             DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179

Query: 412 IDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 233
           +DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDCLLLGLNPK+A
Sbjct: 180 VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239

Query: 232 RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 53
           RPDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299

Query: 52  TEFAQLLQFHIATYFDN 2
           TEFAQLLQFHIATYFDN
Sbjct: 300 TEFAQLLQFHIATYFDN 316