BLASTX nr result
ID: Ophiopogon27_contig00016790
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00016790
(614 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar... 385 e-124
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As... 385 e-120
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo... 369 e-120
dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subt... 356 e-120
ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Se... 367 e-119
gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [... 355 e-119
gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Paras... 355 e-119
gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papav... 370 e-119
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 379 e-119
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio... 369 e-118
gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magno... 369 e-118
gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicot... 368 e-118
gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus... 364 e-118
ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 iso... 379 e-118
ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 iso... 379 e-118
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 378 e-118
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend... 376 e-118
gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apos... 378 e-118
gb|AAQ08515.1| RNA polymerase II largest subunit, partial [Zea m... 367 e-118
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 377 e-117
>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
Length = 1009
Score = 385 bits (988), Expect = e-124
Identities = 194/204 (95%), Positives = 194/204 (95%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQPNITIDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLK
Sbjct: 83 PVKKSRGGCGAQQPNITIDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLK 142
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGLNPKYARPDWMILQVL SVMMDTSARSEDDLTHQLAMIIRH
Sbjct: 143 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRH 202
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 203 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 262
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 263 EGRIRGNLMGKRVDFSARTVITPD 286
>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 385 bits (988), Expect = e-120
Identities = 194/204 (95%), Positives = 194/204 (95%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQPNITIDGMKMVAEYKA KKKSDDPEQLPEPVERKQQLSAERVLSVLK
Sbjct: 164 PVKKSRGGCGAQQPNITIDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLK 223
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGLNPKYARPDWMILQVL SVMMDTSARSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRH 283
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 343
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 344 EGRIRGNLMGKRVDFSARTVITPD 367
>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
Length = 804
Score = 369 bits (946), Expect = e-120
Identities = 186/204 (91%), Positives = 192/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKK RGGCGAQQPNIT+DGMKMVAE+KAPKKK+DD EQLPEPVERKQ LSAERVL+VLK
Sbjct: 95 PVKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLK 153
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGLNPK+ARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 154 RISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 213
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 214 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 273
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 274 EGRIRGNLMGKRVDFSARTVITPD 297
>dbj|GAU22666.1| hypothetical protein TSUD_234880 [Trifolium subterraneum]
Length = 452
Score = 356 bits (914), Expect = e-120
Identities = 180/206 (87%), Positives = 188/206 (91%), Gaps = 2/206 (0%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQP ITI+GMKM+AEYKA +KKSDD EQLPEPVERKQ LSAERVL VLK
Sbjct: 163 PVKKSRGGCGAQQPKITIEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLK 222
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSE--DDLTHQLAMII 354
RISDEDC LLGLNPKYARPDW+ILQVL SVMMDTS+RSE DDLTHQLAMII
Sbjct: 223 RISDEDCQLLGLNPKYARPDWLILQVLPIPPPPVRPSVMMDTSSRSEASDDLTHQLAMII 282
Query: 355 RHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLK 534
RHNENL+RQERNG+PAHII+EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLK
Sbjct: 283 RHNENLKRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLK 342
Query: 535 AKEGRIRGNLMGKRVDFSARTVITPD 612
AKEGRIRGNLMGKRVDFSARTVITPD
Sbjct: 343 AKEGRIRGNLMGKRVDFSARTVITPD 368
>ref|XP_014660874.1| DNA-directed RNA polymerase II subunit 1 [Setaria italica]
gb|KQL00755.1| hypothetical protein SETIT_013247mg [Setaria italica]
Length = 860
Score = 367 bits (943), Expect = e-119
Identities = 185/204 (90%), Positives = 192/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKK RGGCGAQQPNIT+DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLK
Sbjct: 164 PVKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLK 222
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGLNPK+ARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 223 RISDEDCLLLGLNPKFARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 282
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 283 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 342
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 343 EGRIRGNLMGKRVDFSARTVITPD 366
>gb|PON82669.1| DNA-directed RNA polymerase, subunit beta-prime [Trema orientalis]
Length = 460
Score = 355 bits (911), Expect = e-119
Identities = 179/207 (86%), Positives = 189/207 (91%), Gaps = 3/207 (1%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQP +TIDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLK
Sbjct: 163 PVKKSRGGCGAQQPKLTIDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLK 222
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSE---DDLTHQLAMI 351
RISDEDC LLGLNPKYARPDWMILQVL SVMMDTS+RSE DDLTHQLAMI
Sbjct: 223 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEASFDDLTHQLAMI 282
Query: 352 IRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRL 531
IRHNENLRRQERNG+PAHII+EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRL
Sbjct: 283 IRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRL 342
Query: 532 KAKEGRIRGNLMGKRVDFSARTVITPD 612
KAKEGRIRGNLMGKRVDFSARTVITPD
Sbjct: 343 KAKEGRIRGNLMGKRVDFSARTVITPD 369
>gb|PON49951.1| DNA-directed RNA polymerase, subunit gamma [Parasponia andersonii]
Length = 460
Score = 355 bits (911), Expect = e-119
Identities = 179/207 (86%), Positives = 189/207 (91%), Gaps = 3/207 (1%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQP +TIDGMK++AEYK+ +KKSD+ EQLPEPVERKQ L+AERVLSVLK
Sbjct: 163 PVKKSRGGCGAQQPKLTIDGMKIIAEYKSQRKKSDEQEQLPEPVERKQTLTAERVLSVLK 222
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSE---DDLTHQLAMI 351
RISDEDC LLGLNPKYARPDWMILQVL SVMMDTS+RSE DDLTHQLAMI
Sbjct: 223 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEASFDDLTHQLAMI 282
Query: 352 IRHNENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRL 531
IRHNENLRRQERNG+PAHII+EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRL
Sbjct: 283 IRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRL 342
Query: 532 KAKEGRIRGNLMGKRVDFSARTVITPD 612
KAKEGRIRGNLMGKRVDFSARTVITPD
Sbjct: 343 KAKEGRIRGNLMGKRVDFSARTVITPD 369
>gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papaver orientale]
Length = 1010
Score = 370 bits (950), Expect = e-119
Identities = 183/204 (89%), Positives = 191/204 (93%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQP +TI+GMKM+AEYK +KK+DDPEQLPEPVERKQQL+AERVLSVLK
Sbjct: 82 PVKKSRGGCGAQQPKLTIEGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLK 141
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDC+LLGLNPKYARPDWMILQVL SVMMDTSARSEDDLTHQLAMIIRH
Sbjct: 142 RISDEDCILLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRH 201
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLR+QERNGAPAHII EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 202 NENLRKQERNGAPAHIILEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 261
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 262 EGRIRGNLMGKRVDFSARTVITPD 285
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 379 bits (974), Expect = e-119
Identities = 190/204 (93%), Positives = 193/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
P+KKSRGGCGAQQPNITIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PMKKSRGGCGAQQPNITIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLNPKYARPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 343
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 344 EGRIRGNLMGKRVDFSARTVITPD 367
>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron
tulipifera]
Length = 1010
Score = 369 bits (948), Expect = e-118
Identities = 183/204 (89%), Positives = 191/204 (93%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKK RGGCGAQQP +T++GMKM+AEYKA +KK+DD EQLPEPVERKQQLSAERVLSVLK
Sbjct: 82 PVKKRRGGCGAQQPKLTVEGMKMIAEYKATRKKNDDQEQLPEPVERKQQLSAERVLSVLK 141
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 142 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 201
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 202 NENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 261
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 262 EGRIRGNLMGKRVDFSARTVITPD 285
>gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
Length = 1010
Score = 369 bits (948), Expect = e-118
Identities = 183/204 (89%), Positives = 191/204 (93%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKK RGGCGAQQP +T++GMKM+AEYKA +KK+DD EQLPEPVERKQQLSAERVLSVLK
Sbjct: 82 PVKKRRGGCGAQQPKLTVEGMKMIAEYKATRKKNDDQEQLPEPVERKQQLSAERVLSVLK 141
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 142 RISDEDCLLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 201
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 202 NENLRRQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 261
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 262 EGRIRGNLMGKRVDFSARTVITPD 285
>gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicotiana tabacum]
Length = 1010
Score = 368 bits (945), Expect = e-118
Identities = 181/204 (88%), Positives = 191/204 (93%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQP I+IDGMKMVAEYK KKKSDDPEQ+PEPVERKQQLSAERVLS+LK
Sbjct: 82 PVKKSRGGCGAQQPKISIDGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILK 141
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
R+SDEDCLLLGLNP+YARPDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 142 RVSDEDCLLLGLNPEYARPDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 201
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENL+RQERNGAPAHII+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+K
Sbjct: 202 NENLKRQERNGAPAHIISEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSK 261
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 262 EGRIRGNLMGKRVDFSARTVITPD 285
>gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus suber]
Length = 836
Score = 364 bits (934), Expect = e-118
Identities = 180/204 (88%), Positives = 189/204 (92%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
P KKSRGGCGAQQP +TI+GMKM+AEYKA +KKSDD EQLPEPVERKQ L+AERVLS+LK
Sbjct: 161 PAKKSRGGCGAQQPKLTIEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSILK 220
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDC LLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 221 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 280
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLR+QERNGAPAHII+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 281 NENLRKQERNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 340
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 341 EGRIRGNLMGKRVDFSARTVITPD 364
>ref|XP_020585525.1| DNA-directed RNA polymerase II subunit 1 isoform X1 [Phalaenopsis
equestris]
Length = 1827
Score = 379 bits (972), Expect = e-118
Identities = 191/204 (93%), Positives = 192/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDC LLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 343
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 344 EGRIRGNLMGKRVDFSARTVITPD 367
>ref|XP_020585526.1| DNA-directed RNA polymerase II subunit 1 isoform X2 [Phalaenopsis
equestris]
Length = 1827
Score = 379 bits (972), Expect = e-118
Identities = 191/204 (93%), Positives = 192/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDC LLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 343
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 344 EGRIRGNLMGKRVDFSARTVITPD 367
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 378 bits (971), Expect = e-118
Identities = 189/204 (92%), Positives = 193/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
P+KKSRGGCGAQQPNITIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PIKKSRGGCGAQQPNITIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGL+PKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLSPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 343
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 344 EGRIRGNLMGKRVDFSARTVITPD 367
>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
Length = 1516
Score = 376 bits (965), Expect = e-118
Identities = 188/204 (92%), Positives = 192/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
P+KKSRGGCGAQQPNIT+DGMKMVAEYKAPKKKS+D EQLPEPVERKQ LSAERVLSVLK
Sbjct: 226 PIKKSRGGCGAQQPNITVDGMKMVAEYKAPKKKSEDQEQLPEPVERKQILSAERVLSVLK 285
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDC LLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 286 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 345
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 346 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 405
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 406 EGRIRGNLMGKRVDFSARTVITPD 429
>gb|PKA55713.1| DNA-directed RNA polymerase II subunit RPB1 [Apostasia shenzhenica]
Length = 1806
Score = 378 bits (970), Expect = e-118
Identities = 189/204 (92%), Positives = 192/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
P+KKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PIKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDC LLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAM+IRH
Sbjct: 224 RISDEDCQLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRH 283
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 343
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 344 EGRIRGNLMGKRVDFSARTVITPD 367
>gb|AAQ08515.1| RNA polymerase II largest subunit, partial [Zea mays]
Length = 1009
Score = 367 bits (943), Expect = e-118
Identities = 184/204 (90%), Positives = 192/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
P+KK RGGCGAQQPNIT+DGMKMVAE+KAPKKK+DD +QLPEPVERKQ LSAERVL+VLK
Sbjct: 82 PIKK-RGGCGAQQPNITVDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLK 140
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGLNPKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 141 RISDEDCLLLGLNPKYARPDWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 200
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 201 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAK 260
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 261 EGRIRGNLMGKRVDFSARTVITPD 284
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 377 bits (968), Expect = e-117
Identities = 188/204 (92%), Positives = 193/204 (94%)
Frame = +1
Query: 1 PVKKSRGGCGAQQPNITIDGMKMVAEYKAPKKKSDDPEQLPEPVERKQQLSAERVLSVLK 180
P+KKSRGGCGAQQPNITIDGMKM+AEYKAPKKKSDD EQLPEPVERKQ LSAERVLSVLK
Sbjct: 164 PIKKSRGGCGAQQPNITIDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLK 223
Query: 181 RISDEDCLLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRH 360
RISDEDCLLLGL+PKYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRH
Sbjct: 224 RISDEDCLLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRH 283
Query: 361 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAK 540
NENLRRQERNGAPAHIITEFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAK
Sbjct: 284 NENLRRQERNGAPAHIITEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAK 343
Query: 541 EGRIRGNLMGKRVDFSARTVITPD 612
EGRIRGNLMGKRVDFSARTVITPD
Sbjct: 344 EGRIRGNLMGKRVDFSARTVITPD 367