BLASTX nr result
ID: Ophiopogon27_contig00016753
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00016753
(419 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK81378.1| uncharacterized protein A4U43_C01F28400 [Asparagu... 193 1e-60
ref|XP_020251677.1| DNA-directed RNA polymerase V subunit 5A-lik... 193 2e-60
ref|XP_010922167.1| PREDICTED: DNA-directed RNA polymerase V sub... 148 1e-42
ref|XP_010922166.1| PREDICTED: DNA-directed RNA polymerase V sub... 148 2e-42
ref|XP_016205086.1| DNA-directed RNA polymerase V subunit 5A [Ar... 144 2e-40
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerase V sub... 143 3e-40
gb|KQK93524.1| hypothetical protein SETIT_026794mg [Setaria ital... 142 3e-40
ref|XP_015969218.1| DNA-directed RNA polymerase V subunit 5A [Ar... 143 5e-40
ref|XP_018482373.1| PREDICTED: DNA-directed RNA polymerases IV a... 142 7e-40
ref|XP_004978645.1| DNA-directed RNA polymerase V subunit 5A [Se... 142 8e-40
ref|XP_020591378.1| DNA-directed RNA polymerase V subunit 5A-lik... 141 1e-39
ref|NP_001302841.1| DNA-directed RNA polymerases IV and V subuni... 141 2e-39
ref|XP_021668246.1| DNA-directed RNA polymerase V subunit 5A-lik... 142 2e-39
ref|XP_021908470.1| DNA-directed RNA polymerase V subunit 5A [Ca... 141 3e-39
emb|CBI30093.3| unnamed protein product, partial [Vitis vinifera] 143 4e-39
ref|XP_009141985.1| PREDICTED: DNA-directed RNA polymerases IV a... 140 4e-39
ref|XP_009418150.1| PREDICTED: DNA-directed RNA polymerase V sub... 140 4e-39
ref|XP_009141984.1| PREDICTED: DNA-directed RNA polymerases IV a... 140 4e-39
ref|XP_013727336.1| DNA-directed RNA polymerases IV and V subuni... 140 4e-39
ref|NP_001141853.1| uncharacterized protein LOC100273995 [Zea ma... 140 6e-39
>gb|ONK81378.1| uncharacterized protein A4U43_C01F28400 [Asparagus officinalis]
Length = 175
Score = 193 bits (491), Expect = 1e-60
Identities = 97/128 (75%), Positives = 115/128 (89%)
Frame = -1
Query: 389 MLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILVIFCGTAVVK 210
ML DRGY I+ +DI+Q+LADFR+SFG+ NP+LAK+KI+AVLLRDPS+RILV+FCG A VK
Sbjct: 1 MLWDRGYAISRSDIDQTLADFRSSFGE-NPELAKIKIEAVLLRDPSKRILVVFCGAAPVK 59
Query: 209 LSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITELLINITKHVL 30
L+TARDL+T Y KEN SRMILVLQSNMTSQTRE +KLLF FKVE+FH++ELLINITKH L
Sbjct: 60 LTTARDLSTQYSKENWSRMILVLQSNMTSQTREKMKLLFPFKVESFHVSELLINITKHAL 119
Query: 29 KPHHEPLS 6
P+HEPLS
Sbjct: 120 MPNHEPLS 127
>ref|XP_020251677.1| DNA-directed RNA polymerase V subunit 5A-like [Asparagus
officinalis]
Length = 185
Score = 193 bits (491), Expect = 2e-60
Identities = 97/128 (75%), Positives = 115/128 (89%)
Frame = -1
Query: 389 MLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILVIFCGTAVVK 210
ML DRGY I+ +DI+Q+LADFR+SFG+ NP+LAK+KI+AVLLRDPS+RILV+FCG A VK
Sbjct: 1 MLWDRGYAISRSDIDQTLADFRSSFGE-NPELAKIKIEAVLLRDPSKRILVVFCGAAPVK 59
Query: 209 LSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITELLINITKHVL 30
L+TARDL+T Y KEN SRMILVLQSNMTSQTRE +KLLF FKVE+FH++ELLINITKH L
Sbjct: 60 LTTARDLSTQYSKENWSRMILVLQSNMTSQTREKMKLLFPFKVESFHVSELLINITKHAL 119
Query: 29 KPHHEPLS 6
P+HEPLS
Sbjct: 120 MPNHEPLS 127
>ref|XP_010922167.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X2
[Elaeis guineensis]
Length = 188
Score = 148 bits (374), Expect = 1e-42
Identities = 75/137 (54%), Positives = 100/137 (72%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
+LARRT LEMLRDRGY I I +L +FR+ +G+ +PD +L + L P+ ++ V
Sbjct: 24 FLARRTVLEMLRDRGYPIPAEQINLTLDEFRSEYGE-SPDRNRLSLSYSLSSQPNNKVHV 82
Query: 236 IFCGTAVVKLSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITEL 57
IFCGT VKL+ R++ GKENL +IL+LQS MTS+ RE++K +F+FKVETFHITEL
Sbjct: 83 IFCGTEPVKLAVIREIYMQVGKENLYGLILILQSKMTSKAREAIKDIFKFKVETFHITEL 142
Query: 56 LINITKHVLKPHHEPLS 6
L+NITKHVLKP H+ L+
Sbjct: 143 LVNITKHVLKPRHDVLT 159
>ref|XP_010922166.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X1
[Elaeis guineensis]
Length = 217
Score = 148 bits (374), Expect = 2e-42
Identities = 75/137 (54%), Positives = 100/137 (72%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
+LARRT LEMLRDRGY I I +L +FR+ +G+ +PD +L + L P+ ++ V
Sbjct: 24 FLARRTVLEMLRDRGYPIPAEQINLTLDEFRSEYGE-SPDRNRLSLSYSLSSQPNNKVHV 82
Query: 236 IFCGTAVVKLSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITEL 57
IFCGT VKL+ R++ GKENL +IL+LQS MTS+ RE++K +F+FKVETFHITEL
Sbjct: 83 IFCGTEPVKLAVIREIYMQVGKENLYGLILILQSKMTSKAREAIKDIFKFKVETFHITEL 142
Query: 56 LINITKHVLKPHHEPLS 6
L+NITKHVLKP H+ L+
Sbjct: 143 LVNITKHVLKPRHDVLT 159
>ref|XP_016205086.1| DNA-directed RNA polymerase V subunit 5A [Arachis ipaensis]
Length = 232
Score = 144 bits (363), Expect = 2e-40
Identities = 77/138 (55%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YL+RRTTLEML+DRGY I ++I+ SL+ FRA GD +PD+ +L+ A L DPS+RILV
Sbjct: 39 YLSRRTTLEMLKDRGYSIPASEIDLSLSQFRAIHGD-SPDVDRLRFSATHLSDPSKRILV 97
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
IFCG +VK+++ R +A + +E LS +IL++QS +TSQ +++ L F FKVE F IT+
Sbjct: 98 IFCGQHIVKVTSIRSIAAQIVNRETLSGLILIVQSTITSQALKAVNL-FSFKVEIFQITD 156
Query: 59 LLINITKHVLKPHHEPLS 6
LLINITKHVLKP HE L+
Sbjct: 157 LLINITKHVLKPKHEILT 174
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X1
[Vitis vinifera]
Length = 229
Score = 143 bits (361), Expect = 3e-40
Identities = 79/138 (57%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YLARRT LEMLRDRGY I DI+ SL DFR SF PD +L+I A L DPS++ILV
Sbjct: 36 YLARRTLLEMLRDRGYSIPALDIDISLQDFR-SFYSQKPDPDRLRISAALRSDPSKKILV 94
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
IFCG VVK++ R +AT + K++LS++ILVLQ+++TSQ +++ L F F+VE F IT+
Sbjct: 95 IFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDL-FSFQVEKFQITD 153
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVLKP H L+
Sbjct: 154 LLVNITKHVLKPKHRVLT 171
>gb|KQK93524.1| hypothetical protein SETIT_026794mg [Setaria italica]
Length = 206
Score = 142 bits (359), Expect = 3e-40
Identities = 71/139 (51%), Positives = 101/139 (72%)
Frame = -1
Query: 419 LYLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRIL 240
L+LARRT LEMLRDRGY + ++ ++L +FRA + + P+L +L L D S ++
Sbjct: 46 LFLARRTALEMLRDRGYSVPEAELARTLPEFRAWWAE-KPELERLAFSTALAADQSSKVK 104
Query: 239 VIFCGTAVVKLSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
V+FC VK++ R++ + +ENLSR+IL+LQS +TS++RES+K +F FKV+TF ITE
Sbjct: 105 VVFCPPEPVKIAVIREIYSRVQEENLSRLILILQSKITSKSRESIKEIFPFKVDTFQITE 164
Query: 59 LLINITKHVLKPHHEPLSA 3
LL+NITKHVLKP HE L+A
Sbjct: 165 LLVNITKHVLKPKHEVLTA 183
>ref|XP_015969218.1| DNA-directed RNA polymerase V subunit 5A [Arachis duranensis]
Length = 232
Score = 143 bits (360), Expect = 5e-40
Identities = 76/138 (55%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YL+RRTTLEML+DRGY I ++I+ SL+ FRA GD +PD+ +L+ A L DPS+RILV
Sbjct: 39 YLSRRTTLEMLKDRGYSIPASEIDLSLSQFRAIHGD-SPDVDRLRFSATHLSDPSKRILV 97
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
IFCG +VK+++ R +A + +E L+ +IL++QS +TSQ +++ L F FKVE F IT+
Sbjct: 98 IFCGQHIVKVTSIRSIAAQIVNRETLTGLILIVQSTITSQALKAVNL-FSFKVEIFQITD 156
Query: 59 LLINITKHVLKPHHEPLS 6
LLINITKHVLKP HE L+
Sbjct: 157 LLINITKHVLKPKHEILT 174
>ref|XP_018482373.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B
[Raphanus sativus]
Length = 222
Score = 142 bits (358), Expect = 7e-40
Identities = 73/138 (52%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YLARRTT+EMLRDRGY I+ DI +L +FRA +GD P++ +L+I A D S++I V
Sbjct: 29 YLARRTTMEMLRDRGYDISNEDINLTLHEFRALYGD-RPNVDRLRISAQHCSDSSRKIAV 87
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
+FCG+ +VK++ R++A + G+ENL+ +ILVLQS++T+Q ++++L F FKVE FH+TE
Sbjct: 88 VFCGSGIVKVNAIREIAADVLGRENLTGLILVLQSDITNQALKAVEL-FSFKVELFHLTE 146
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVL+P H+ L+
Sbjct: 147 LLVNITKHVLRPKHQVLN 164
>ref|XP_004978645.1| DNA-directed RNA polymerase V subunit 5A [Setaria italica]
gb|KQK93523.1| hypothetical protein SETIT_026794mg [Setaria italica]
Length = 240
Score = 142 bits (359), Expect = 8e-40
Identities = 71/139 (51%), Positives = 101/139 (72%)
Frame = -1
Query: 419 LYLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRIL 240
L+LARRT LEMLRDRGY + ++ ++L +FRA + + P+L +L L D S ++
Sbjct: 46 LFLARRTALEMLRDRGYSVPEAELARTLPEFRAWWAE-KPELERLAFSTALAADQSSKVK 104
Query: 239 VIFCGTAVVKLSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
V+FC VK++ R++ + +ENLSR+IL+LQS +TS++RES+K +F FKV+TF ITE
Sbjct: 105 VVFCPPEPVKIAVIREIYSRVQEENLSRLILILQSKITSKSRESIKEIFPFKVDTFQITE 164
Query: 59 LLINITKHVLKPHHEPLSA 3
LL+NITKHVLKP HE L+A
Sbjct: 165 LLVNITKHVLKPKHEVLTA 183
>ref|XP_020591378.1| DNA-directed RNA polymerase V subunit 5A-like [Phalaenopsis
equestris]
Length = 217
Score = 141 bits (356), Expect = 1e-39
Identities = 75/138 (54%), Positives = 98/138 (71%)
Frame = -1
Query: 419 LYLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRIL 240
L+LARRT LEMLRDRGY +A D+E +L+ FR+ +G PDL +L+I L+ DPS++IL
Sbjct: 23 LFLARRTILEMLRDRGYVVAPPDLELTLSSFRSHYGQC-PDLERLRISTNLVSDPSKKIL 81
Query: 239 VIFCGTAVVKLSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
VIFCG VKL+T + + +GKE L RMI+V Q+ TS+ R+ + +KVETF ITE
Sbjct: 82 VIFCGPEPVKLATVQAIFNQFGKEKLYRMIIVFQNKTTSKARDCTENFPLYKVETFQITE 141
Query: 59 LLINITKHVLKPHHEPLS 6
LLINITKH L P HE L+
Sbjct: 142 LLINITKHALMPKHEILN 159
>ref|NP_001302841.1| DNA-directed RNA polymerases IV and V subunit 5B-like [Brassica
napus]
ref|XP_013631808.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B
[Brassica oleracea var. oleracea]
gb|AAF81222.1| RPB5d [Brassica napus]
emb|CDY14763.1| BnaC04g47600D [Brassica napus]
Length = 223
Score = 141 bits (356), Expect = 2e-39
Identities = 74/138 (53%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YLARRTT+EMLRDRGY I+ DI +L +FRA +G D P++ +L+I A D S++I V
Sbjct: 29 YLARRTTMEMLRDRGYDISNEDINLTLQEFRALYG-DRPNVDRLRISAQHCSDSSKKIAV 87
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
+FCG+ +VK+S RD+A + G+ENL+ +ILVLQS++T+Q ++++ LF FKVE F +TE
Sbjct: 88 VFCGSGIVKVSAIRDIAADVLGRENLTGLILVLQSDITNQALKAVE-LFSFKVELFQLTE 146
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVL+P H L+
Sbjct: 147 LLVNITKHVLRPKHHVLN 164
>ref|XP_021668246.1| DNA-directed RNA polymerase V subunit 5A-like isoform X1 [Hevea
brasiliensis]
Length = 237
Score = 142 bits (357), Expect = 2e-39
Identities = 75/138 (54%), Positives = 103/138 (74%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YL+RRT EMLRDRGY ++ ++IEQSL +FRA G NPD+ +LK A DPS+R+LV
Sbjct: 44 YLSRRTVFEMLRDRGYSVSSSEIEQSLQEFRAIHGQ-NPDINRLKFSATHKSDPSKRMLV 102
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
IFCGT VVK+S+ R +A + + +L+ +IL+LQ+ +T+Q +++ L F FKVE F IT+
Sbjct: 103 IFCGTGVVKVSSVRVIAAQIVNRGSLTGLILILQNQITNQALKAVDL-FTFKVEMFQITD 161
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVLKP HE +S
Sbjct: 162 LLVNITKHVLKPKHEVMS 179
>ref|XP_021908470.1| DNA-directed RNA polymerase V subunit 5A [Carica papaya]
Length = 236
Score = 141 bits (355), Expect = 3e-39
Identities = 75/138 (54%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YL+RRT LEML+DRGY +AV++I+ SL +FRA G NPD+ +L+ DPS+RILV
Sbjct: 43 YLSRRTALEMLKDRGYEVAVSEIDLSLEEFRAVHGQ-NPDVERLRFSVHHRSDPSKRILV 101
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
IFCGT VVK++T R +A+ + K +L+ +IL++Q+++TSQ +++ L F FKVE F ITE
Sbjct: 102 IFCGTGVVKVNTIRSIASQIVNKGSLTGLILIVQNHITSQALKAIDL-FSFKVEIFQITE 160
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVLKP H L+
Sbjct: 161 LLVNITKHVLKPKHRVLT 178
>emb|CBI30093.3| unnamed protein product, partial [Vitis vinifera]
Length = 330
Score = 143 bits (361), Expect = 4e-39
Identities = 79/138 (57%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YLARRT LEMLRDRGY I DI+ SL DFR SF PD +L+I A L DPS++ILV
Sbjct: 137 YLARRTLLEMLRDRGYSIPALDIDISLQDFR-SFYSQKPDPDRLRISAALRSDPSKKILV 195
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
IFCG VVK++ R +AT + K++LS++ILVLQ+++TSQ +++ L F F+VE F IT+
Sbjct: 196 IFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDL-FSFQVEKFQITD 254
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVLKP H L+
Sbjct: 255 LLVNITKHVLKPKHRVLT 272
>ref|XP_009141985.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B isoform
X2 [Brassica rapa]
Length = 220
Score = 140 bits (353), Expect = 4e-39
Identities = 72/138 (52%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YLARRTT+EMLRDRGY I+ DI +L +FR+ +GD P++ +L+I A D S++I V
Sbjct: 29 YLARRTTMEMLRDRGYDISNEDINLTLQEFRSLYGDP-PNVDRLRISAQHCSDSSKKIAV 87
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
+FCG+ +VK++ R++A + G+ENL+ +ILVLQS++T+Q ++++L F FKVE FH+TE
Sbjct: 88 VFCGSGIVKVNAIREIAADVLGRENLTGLILVLQSDITNQALKAVEL-FSFKVELFHLTE 146
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVL+P H L+
Sbjct: 147 LLVNITKHVLRPKHRVLN 164
>ref|XP_009418150.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Musa
acuminata subsp. malaccensis]
Length = 221
Score = 140 bits (353), Expect = 4e-39
Identities = 75/138 (54%), Positives = 98/138 (71%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
+LARRT LEMLRDRG+ I D+ SL FRA FGD NP L L+I + +P +++LV
Sbjct: 28 FLARRTLLEMLRDRGFPIPDDDLAISLPAFRARFGD-NPKLEDLRISTTIPSNPRKKLLV 86
Query: 236 IFCGTAVVKLSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITEL 57
IFCG KLST R++ + KE+L+ +ILVLQS MTS+ RE + +F+F++E F ITEL
Sbjct: 87 IFCGIEPFKLSTVREIYSWVSKEHLTGLILVLQSKMTSKARELTEEIFKFRLEIFQITEL 146
Query: 56 LINITKHVLKPHHEPLSA 3
L+NITKHVLKP H L+A
Sbjct: 147 LVNITKHVLKPRHVLLAA 164
>ref|XP_009141984.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B isoform
X1 [Brassica rapa]
Length = 223
Score = 140 bits (353), Expect = 4e-39
Identities = 72/138 (52%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YLARRTT+EMLRDRGY I+ DI +L +FR+ +GD P++ +L+I A D S++I V
Sbjct: 29 YLARRTTMEMLRDRGYDISNEDINLTLQEFRSLYGDP-PNVDRLRISAQHCSDSSKKIAV 87
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
+FCG+ +VK++ R++A + G+ENL+ +ILVLQS++T+Q ++++L F FKVE FH+TE
Sbjct: 88 VFCGSGIVKVNAIREIAADVLGRENLTGLILVLQSDITNQALKAVEL-FSFKVELFHLTE 146
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVL+P H L+
Sbjct: 147 LLVNITKHVLRPKHRVLN 164
>ref|XP_013727336.1| DNA-directed RNA polymerases IV and V subunit 5B [Brassica napus]
Length = 223
Score = 140 bits (353), Expect = 4e-39
Identities = 72/138 (52%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = -1
Query: 416 YLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRILV 237
YLARRTT+EMLRDRGY I+ DI +L +FR+ +GD P++ +L+I A D S++I V
Sbjct: 29 YLARRTTMEMLRDRGYDISNEDINLTLQEFRSLYGDP-PNVDRLRISAQHCSDSSKKIAV 87
Query: 236 IFCGTAVVKLSTARDLAT-LYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
+FCG+ +VK++ R++A + G+ENL+ +ILVLQS++T+Q ++++L F FKVE FH+TE
Sbjct: 88 VFCGSGIVKVNAIREIAADVLGRENLTGLILVLQSDITNQALKAVEL-FSFKVELFHLTE 146
Query: 59 LLINITKHVLKPHHEPLS 6
LL+NITKHVL+P H L+
Sbjct: 147 LLVNITKHVLRPKHRVLN 164
>ref|NP_001141853.1| uncharacterized protein LOC100273995 [Zea mays]
gb|ACF87172.1| unknown [Zea mays]
Length = 248
Score = 140 bits (354), Expect = 6e-39
Identities = 72/139 (51%), Positives = 98/139 (70%)
Frame = -1
Query: 419 LYLARRTTLEMLRDRGYGIAVTDIEQSLADFRASFGDDNPDLAKLKIDAVLLRDPSQRIL 240
L+LARRT LEMLRDRGY + ++ ++L +FRA + + P+L +L L DPS ++
Sbjct: 54 LFLARRTALEMLRDRGYAVPEEELARTLPEFRA-WWEYRPELERLAFSTTLTSDPSSKVK 112
Query: 239 VIFCGTAVVKLSTARDLATLYGKENLSRMILVLQSNMTSQTRESLKLLFQFKVETFHITE 60
V+FC VK++ R + T ENLSR+IL+LQ + S TRES+K +F+FKV+TF ITE
Sbjct: 113 VVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEIFRFKVDTFQITE 172
Query: 59 LLINITKHVLKPHHEPLSA 3
LL+NITKHVLKP HE L+A
Sbjct: 173 LLVNITKHVLKPKHEVLTA 191