BLASTX nr result

ID: Ophiopogon27_contig00016737 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00016737
         (669 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267004.1| reticulon-like protein B11 [Asparagus offici...    50   2e-07

>ref|XP_020267004.1| reticulon-like protein B11 [Asparagus officinalis]
          Length = 185

 Score = 50.1 bits (118), Expect(2) = 2e-07
 Identities = 28/39 (71%), Positives = 30/39 (76%)
 Frame = +3

Query: 210 LVSIIFFRAKSAILFNRHVTLNPNLEISNVVMEKATETV 326
           LVSIIFF AKSA L NR +   PNLEISN V+EKATE V
Sbjct: 49  LVSIIFFWAKSATLLNRPLPPIPNLEISNEVVEKATERV 87



 Score = 33.1 bits (74), Expect(2) = 2e-07
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +1

Query: 328 VWINHVLVMAIGMCIG*DRKVFLQV 402
           VWIN VL +A  + +G DRKVFLQV
Sbjct: 89  VWINRVLSVARDIGVGRDRKVFLQV 113


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