BLASTX nr result

ID: Ophiopogon27_contig00016510 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00016510
         (369 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020259126.1| protein ROOT HAIR DEFECTIVE 3-like [Asparagu...    67   3e-10
ref|XP_010925000.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 iso...    58   3e-07
ref|XP_019706870.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 iso...    58   3e-07
ref|XP_010904950.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 [El...    57   7e-07
ref|XP_008807961.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik...    56   2e-06
gb|PKA57267.1| Protein root hair defective 3 [Apostasia shenzhen...    56   2e-06
ref|XP_020105607.1| protein ROOT HAIR DEFECTIVE 3-like [Ananas c...    54   6e-06
gb|OAY75409.1| Protein ROOT HAIR DEFECTIVE 3 [Ananas comosus]          54   6e-06

>ref|XP_020259126.1| protein ROOT HAIR DEFECTIVE 3-like [Asparagus officinalis]
 gb|ONK76557.1| uncharacterized protein A4U43_C03F29510 [Asparagus officinalis]
          Length = 842

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 33/39 (84%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
 Frame = -3

Query: 367 ELDSRSFRNGVNSDTISDA-SSNVTSSESGAEYTSPMKQ 254
           ELDSRSFRNG+N+D+ SDA SSN+TSSESGAEYTSPMKQ
Sbjct: 803 ELDSRSFRNGINNDSTSDAASSNITSSESGAEYTSPMKQ 841


>ref|XP_010925000.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 isoform X2 [Elaeis
           guineensis]
          Length = 902

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -3

Query: 367 ELDSRSFRNGVNSDTISDASSNVTSSESGAEYTSPMKQ 254
           ELDS+SFRNGV  ++ SDASSN++SSESGAEY+SP+ Q
Sbjct: 865 ELDSKSFRNGVYHNSTSDASSNISSSESGAEYSSPLTQ 902


>ref|XP_019706870.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 isoform X1 [Elaeis
           guineensis]
          Length = 903

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -3

Query: 367 ELDSRSFRNGVNSDTISDASSNVTSSESGAEYTSPMKQ 254
           ELDS+SFRNGV  ++ SDASSN++SSESGAEY+SP+ Q
Sbjct: 866 ELDSKSFRNGVYHNSTSDASSNISSSESGAEYSSPLTQ 903


>ref|XP_010904950.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 [Elaeis guineensis]
          Length = 861

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -3

Query: 367 ELDSRSFRNGVNSDTISDASSNVTSSESGAEYTSPMKQ 254
           EL S+ FRNG+  ++ SDASSN+TSSESGAEY+SP+KQ
Sbjct: 824 ELASKRFRNGIYDNSTSDASSNITSSESGAEYSSPLKQ 861


>ref|XP_008807961.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Phoenix dactylifera]
 ref|XP_008807967.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Phoenix dactylifera]
          Length = 808

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = -3

Query: 367 ELDSRSFRNGVNSDTISDASSNVTSSESGAEYTSPMKQ 254
           E+DS+SFRNGV +++ SDASSN++SSESG EY+SP+ Q
Sbjct: 771 EVDSKSFRNGVYNNSTSDASSNISSSESGPEYSSPLAQ 808


>gb|PKA57267.1| Protein root hair defective 3 [Apostasia shenzhenica]
          Length = 812

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
 Frame = -3

Query: 367 ELDSRSFRNGV-NSDTISDASSNVTSSESGAEYTSPMKQ 254
           ELDS+SF NGV NS   S+ASSNVTSS+SGAEYTSP+KQ
Sbjct: 771 ELDSKSFPNGVHNSLASSEASSNVTSSDSGAEYTSPVKQ 809


>ref|XP_020105607.1| protein ROOT HAIR DEFECTIVE 3-like [Ananas comosus]
          Length = 779

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -3

Query: 367 ELDSRSFRNGVNSDTISDASSNVTSSESGAEYTSP 263
           ELDS+SFRNGV S++ SDASSN++S ESG EY+SP
Sbjct: 742 ELDSKSFRNGVYSNSTSDASSNISSPESGVEYSSP 776


>gb|OAY75409.1| Protein ROOT HAIR DEFECTIVE 3 [Ananas comosus]
          Length = 825

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = -3

Query: 367 ELDSRSFRNGVNSDTISDASSNVTSSESGAEYTSP 263
           ELDS+SFRNGV S++ SDASSN++S ESG EY+SP
Sbjct: 788 ELDSKSFRNGVYSNSTSDASSNISSPESGVEYSSP 822


Top