BLASTX nr result

ID: Ophiopogon27_contig00016338 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00016338
         (716 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248864.1| putative RING-H2 finger protein ATL69 [Aspar...    72   1e-11
ref|XP_010919220.1| PREDICTED: RING-H2 finger protein ATL1 [Elae...    63   3e-08
ref|XP_008803264.1| PREDICTED: RING-H2 finger protein ATL7-like ...    58   2e-06

>ref|XP_020248864.1| putative RING-H2 finger protein ATL69 [Asparagus officinalis]
 gb|ONK56704.1| uncharacterized protein A4U43_C10F11870 [Asparagus officinalis]
          Length = 189

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 33/55 (60%), Positives = 42/55 (76%)
 Frame = -2

Query: 715 NDTFEVPAIFGVLQQTGSAELPSDHSHQWLLPSHQQSDGIENNQEIHDSVSINIG 551
           +D FEVP  F VL +  + E   +HS+QWLLPSH++S+GIE+NQE  DSVSINIG
Sbjct: 134 SDMFEVPPEFEVLHEQNNTEHTDEHSNQWLLPSHRRSEGIESNQETRDSVSINIG 188


>ref|XP_010919220.1| PREDICTED: RING-H2 finger protein ATL1 [Elaeis guineensis]
          Length = 204

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = -2

Query: 691 IFGVLQQTGSAELPSDHSHQWLLPSHQQSDGIENNQEIHDSVSINIG 551
           +FG     G+ E  SD S+QWLLP HQ+S+G ENNQEIH+SVS+ IG
Sbjct: 146 LFGAHHMVGNTEGSSDQSNQWLLPGHQRSEGSENNQEIHESVSVVIG 192


>ref|XP_008803264.1| PREDICTED: RING-H2 finger protein ATL7-like [Phoenix dactylifera]
          Length = 203

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = -2

Query: 715 NDTFEVP----AIFGVLQQTGSAELPSDHSHQWLLPSHQQSDGIENNQEIHDSVSINIGE 548
           ND F+       +F      G+ E  SD S+QWLLP HQ+S+  ENNQEIH+SVS+ I  
Sbjct: 134 NDAFDAKYAASPLFDAHHTVGNPEGSSDRSNQWLLPGHQRSEASENNQEIHESVSVVIAV 193

Query: 547 P 545
           P
Sbjct: 194 P 194


Top