BLASTX nr result
ID: Ophiopogon27_contig00016077
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00016077
(568 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|... 229 7e-72
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 230 5e-69
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 236 1e-68
gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposo... 226 7e-68
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo... 224 1e-67
ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281... 227 1e-67
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 232 2e-67
dbj|GAU47849.1| hypothetical protein TSUD_404260 [Trifolium subt... 230 2e-67
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024... 233 2e-67
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 232 3e-67
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 232 3e-67
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 232 4e-67
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 224 4e-67
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 231 6e-67
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 228 3e-66
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 229 5e-66
gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposo... 219 6e-66
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 227 6e-66
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 226 1e-65
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 228 1e-65
>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
Length = 324
Score = 229 bits (584), Expect = 7e-72
Identities = 108/164 (65%), Positives = 131/164 (79%), Gaps = 6/164 (3%)
Frame = -1
Query: 475 PSSYKEAIAADDSDRWVVAMESEMESLDRNQTWSLVDLPKGSRAIGCRWVFRKKDS---- 308
P++YK+A+ + + D+W +AM EM+SL +N TW L +LPKG +AIGC+WVF KK+
Sbjct: 110 PTTYKDAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKKAIGCKWVFAKKEGFPNQ 169
Query: 307 --EHYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLH 134
YKARLVAKGYAQKEG+DYNE+FSPVVKH+SIR++L +V Q DLEL QMDVKTAFLH
Sbjct: 170 VDVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIMLALVAQLDLELVQMDVKTAFLH 229
Query: 133 GELEEKIYMKQPEGYIVDGKEQKVCLLQKSLYGLKQSPRQWYKR 2
G LEE+IYM QPEG+ V GKE VC L+KSLYGLKQS RQWYKR
Sbjct: 230 GNLEEEIYMTQPEGFKVAGKENMVCKLEKSLYGLKQSSRQWYKR 273
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 230 bits (586), Expect = 5e-69
Identities = 116/199 (58%), Positives = 144/199 (72%), Gaps = 11/199 (5%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFAL-----LTEVGEPSSYKEAIAADDSDRWVVAMESEME 401
+ +R P RY E ++ A+AL + EPS+Y EAI +DD +RW+ AM EME
Sbjct: 168 KPKRSTKPPQRY-IEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEME 226
Query: 400 SLDRNQTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEI 239
SL++N TW LV LPK + I C+W+F++K D YKARLVAKGY+Q G+D+N++
Sbjct: 227 SLEKNHTWELVKLPKEKKPIRCKWIFKRKECISPSDEAMYKARLVAKGYSQIPGIDFNDV 286
Query: 238 FSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVC 59
FSPVVKH+SIR LL +V D ELEQMDVKTAFLHGELEE IYM+QPEG++V GKE VC
Sbjct: 287 FSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVC 346
Query: 58 LLQKSLYGLKQSPRQWYKR 2
L+KSLYGLKQSPRQWYKR
Sbjct: 347 RLKKSLYGLKQSPRQWYKR 365
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 236 bits (603), Expect = 1e-68
Identities = 114/183 (62%), Positives = 141/183 (77%), Gaps = 6/183 (3%)
Frame = -1
Query: 535 RYGWEPSDYGAFALLTEVGEPSSYKEAIAADDSDRWVVAMESEMESLDRNQTWSLVDLPK 356
R+G+EP + + AL G+P++Y++AI + +S W+ AM EMESL +N W LV PK
Sbjct: 762 RFGFEPEEDVSRALSISQGDPTTYEDAIESVESAGWIGAMTEEMESLHKNSVWELVPKPK 821
Query: 355 GSRAIGCRWVFRKKDSEH------YKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRLLLV 194
+ +GC+WVFRKK+ H YKARLVAKGY+QKEGVDY+EIFSPVVKHTSIRLLL
Sbjct: 822 ERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLLLS 881
Query: 193 VVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLLQKSLYGLKQSPRQ 14
+ Q+D+E+EQMDVKTAFLHG+LEE IYM QPEG++ GKE VC L+KSLYGLKQSPRQ
Sbjct: 882 IAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQ 941
Query: 13 WYK 5
WYK
Sbjct: 942 WYK 944
>gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 595
Score = 226 bits (577), Expect = 7e-68
Identities = 111/192 (57%), Positives = 145/192 (75%), Gaps = 8/192 (4%)
Frame = -1
Query: 568 RRSERHVGHPDRYGWEPSDYGAFALLTEVG--EPSSYKEAIAADDSDRWVVAMESEMESL 395
++ +R + P+RYG+E A E+ EP++YKEAI+ ++++W++AM EMESL
Sbjct: 404 QKPKRVIKPPERYGFEDMATYALHAAEEIDSDEPTTYKEAISHPEAEKWILAMREEMESL 463
Query: 394 DRNQTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEIFS 233
+NQTW LV+LPKG +GC+W+++KK + YKARLVAKG++QKEGVD+NEIFS
Sbjct: 464 YKNQTWKLVELPKGRHVVGCKWIYKKKSIFSEKEEIRYKARLVAKGFSQKEGVDFNEIFS 523
Query: 232 PVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLL 53
PVV+HTSIR+LL +V D+ELEQ+DVKTAFLHG LEE I MKQPEG+ V GKE VC L
Sbjct: 524 PVVRHTSIRVLLAIVANQDMELEQLDVKTAFLHGRLEENILMKQPEGFEVQGKEGYVCQL 583
Query: 52 QKSLYGLKQSPR 17
Q+SLYGLKQSPR
Sbjct: 584 QRSLYGLKQSPR 595
>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 224 bits (571), Expect = 1e-67
Identities = 107/203 (52%), Positives = 150/203 (73%), Gaps = 14/203 (6%)
Frame = -1
Query: 568 RRSERHVGHPDRYG----WEPSDYGAFALLT----EVGEPSSYKEAIAADDSDRWVVAME 413
RR+ R + P RY ++ A+ALL + EP SYKEAI + ++ +W++AM+
Sbjct: 154 RRTRREIRKPTRYADVTNVVDTNSVAYALLVGENLDSDEPKSYKEAIQSKEASKWLIAMD 213
Query: 412 SEMESLDRNQTWSLVDLPKGSRAIGCRWVFRKKDS------EHYKARLVAKGYAQKEGVD 251
EM+SL +NQTW LV LP+G + +GC+WV ++K+ +KARLVAKG++QKEG+D
Sbjct: 214 EEMQSLKKNQTWELVPLPRGVKPVGCKWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGID 273
Query: 250 YNEIFSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKE 71
Y+E+FSPVVKH +IR+LL +V+ D++LEQ++VK AFLHG LEE++YM QP+G++ GK+
Sbjct: 274 YHEVFSPVVKHKTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDGFLEVGKK 333
Query: 70 QKVCLLQKSLYGLKQSPRQWYKR 2
VCLL+KSLYGLKQSPRQWYKR
Sbjct: 334 NHVCLLKKSLYGLKQSPRQWYKR 356
>ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281003 [Oryza sativa
Japonica Group]
Length = 651
Score = 227 bits (578), Expect = 1e-67
Identities = 114/199 (57%), Positives = 144/199 (72%), Gaps = 11/199 (5%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFAL-----LTEVGEPSSYKEAIAADDSDRWVVAMESEME 401
R +R+ P RY E ++ A+AL + EPS+Y +AI +DD +RW+ AM EME
Sbjct: 343 RPKRNTKPPRRY-IEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEME 401
Query: 400 SLDRNQTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEI 239
SL++N +W L LPK + I C+W+F++K D YKARLVAKGY+Q G+D+N++
Sbjct: 402 SLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDV 461
Query: 238 FSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVC 59
FSPVVKH+SIR LL +V D ELEQMDVKTAFLHGELEE IYM+QPEG++V GKE VC
Sbjct: 462 FSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVC 521
Query: 58 LLQKSLYGLKQSPRQWYKR 2
L+KSLYGLKQSPRQWYKR
Sbjct: 522 RLKKSLYGLKQSPRQWYKR 540
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1032
Score = 232 bits (591), Expect = 2e-67
Identities = 111/164 (67%), Positives = 130/164 (79%), Gaps = 6/164 (3%)
Frame = -1
Query: 475 PSSYKEAIAADDSDRWVVAMESEMESLDRNQTWSLVDLPKGSRAIGCRWVFRKKDS---- 308
P++Y EA+ + D+W AM EMESL RNQTW L +LPKG +AIGC+WV+ KKD
Sbjct: 579 PTTYIEAVKGSEEDKWRSAMSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDK 638
Query: 307 --EHYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLH 134
YKARLVAKGYAQKEG+DYNE+FSPVVKH+SIR+LL +V Q D+EL QMDVKTAFLH
Sbjct: 639 SEVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLH 698
Query: 133 GELEEKIYMKQPEGYIVDGKEQKVCLLQKSLYGLKQSPRQWYKR 2
G+LEE+IYM QPEG+ V GKE C L+KSLYGLKQSPRQWYKR
Sbjct: 699 GDLEEEIYMTQPEGFKVAGKENMFCKLEKSLYGLKQSPRQWYKR 742
>dbj|GAU47849.1| hypothetical protein TSUD_404260 [Trifolium subterraneum]
Length = 887
Score = 230 bits (587), Expect = 2e-67
Identities = 111/194 (57%), Positives = 147/194 (75%), Gaps = 6/194 (3%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFALLTEVGEPSSYKEAIAADDSDRWVVAMESEMESLDRN 386
R R V P+RYG+E D A+ALLT G+PS+++EA+A+ + +RW+ AM EMESL +N
Sbjct: 443 RERRSVKPPERYGYE--DLAAYALLTSSGDPSTFREAMASQEKERWMGAMMEEMESLQKN 500
Query: 385 QTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEIFSPVV 224
QTW LV LPKG R IGC+WV+++K + E +KARLVAKGY+Q++ +DY+EIF PVV
Sbjct: 501 QTWELVQLPKGKRVIGCKWVYKRKPAVTEKEGEKFKARLVAKGYSQQKRIDYDEIFFPVV 560
Query: 223 KHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLLQKS 44
+HTSIR +L +V D+ LEQMDVKT FLH L+E+IYM+Q EG+ GK + VC L++S
Sbjct: 561 RHTSIRAVLALVASRDMHLEQMDVKTTFLHDNLDEQIYMEQAEGFSDTGKGRLVCKLKRS 620
Query: 43 LYGLKQSPRQWYKR 2
LYGLK+SPRQWYKR
Sbjct: 621 LYGLKRSPRQWYKR 634
Score = 160 bits (404), Expect = 6e-42
Identities = 82/145 (56%), Positives = 100/145 (68%), Gaps = 6/145 (4%)
Frame = -1
Query: 418 MESEMESLDRNQTWSLVDLPKGSRAIGCRWVFRKKDS-----EHYKARLVAKGYAQKEGV 254
M EM+SL +N TW LVD P G + +GCRWV+ K E +KARLVAKGY Q GV
Sbjct: 1 MNEEMKSLKKNNTWELVDCPPGKKIVGCRWVYTVKYKVDGTIERFKARLVAKGYTQTYGV 60
Query: 253 DYNEIFSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG-YIVDG 77
DY EIF+PV K +IR+LL + FD L+Q DVK AFLHGEL E++YM+ P G I +
Sbjct: 61 DYTEIFAPVAKVNTIRVLLSLAANFDWLLQQFDVKNAFLHGELTEEVYMELPLGCNIPEA 120
Query: 76 KEQKVCLLQKSLYGLKQSPRQWYKR 2
E+KVC L+KSLYGLKQSPR W+ R
Sbjct: 121 CEKKVCRLKKSLYGLKQSPRAWFGR 145
>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
Length = 1892
Score = 233 bits (593), Expect = 2e-67
Identities = 110/165 (66%), Positives = 135/165 (81%), Gaps = 6/165 (3%)
Frame = -1
Query: 478 EPSSYKEAIAADDSDRWVVAMESEMESLDRNQTWSLVDLPKGSRAIGCRWVFRKKD---- 311
EPSSY EA + D+ +W +AM EMESL RN+TW LV PKG R +GC+WV++KK+
Sbjct: 1377 EPSSYIEATSCKDAAQWQLAMMEEMESLHRNETWVLVKRPKGMRTVGCKWVYKKKEGIPE 1436
Query: 310 --SEHYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFL 137
+ +KARLVAKG++QKEG+DYNEIFSPVVKH+SIR+LL +V QFDLEL+Q+DVKTAFL
Sbjct: 1437 VEAARFKARLVAKGFSQKEGIDYNEIFSPVVKHSSIRVLLALVAQFDLELQQLDVKTAFL 1496
Query: 136 HGELEEKIYMKQPEGYIVDGKEQKVCLLQKSLYGLKQSPRQWYKR 2
HG+LEE IYM QPEG++ +GKE VC L+KSLYGLKQSPRQWYKR
Sbjct: 1497 HGDLEETIYMDQPEGFLAEGKEDHVCQLKKSLYGLKQSPRQWYKR 1541
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 232 bits (592), Expect = 3e-67
Identities = 110/175 (62%), Positives = 137/175 (78%), Gaps = 7/175 (4%)
Frame = -1
Query: 505 AFALLTEVG-EPSSYKEAIAADDSDRWVVAMESEMESLDRNQTWSLVDLPKGSRAIGCRW 329
A ++ +G EPSSY EA+ D+S +W +AM E+ESL +N TW LV P + +GC+W
Sbjct: 1290 ALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKW 1349
Query: 328 VFRKKD------SEHYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRLLLVVVNQFDLEL 167
VF+KK+ + +KARLVAKG+ QKEG+DYNE+FSPVVKH+SIR+LL +V + DLEL
Sbjct: 1350 VFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLEL 1409
Query: 166 EQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLLQKSLYGLKQSPRQWYKR 2
EQ+DVKTAFLHGELEE IYM+QPEG+ V GKE VCLL+KSLYGLKQSPRQWYKR
Sbjct: 1410 EQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKR 1464
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 232 bits (592), Expect = 3e-67
Identities = 110/175 (62%), Positives = 137/175 (78%), Gaps = 7/175 (4%)
Frame = -1
Query: 505 AFALLTEVG-EPSSYKEAIAADDSDRWVVAMESEMESLDRNQTWSLVDLPKGSRAIGCRW 329
A ++ +G EPSSY EA+ D+S +W +AM E+ESL +N TW LV P + +GC+W
Sbjct: 1311 ALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSNQKIVGCKW 1370
Query: 328 VFRKKD------SEHYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIRLLLVVVNQFDLEL 167
VF+KK+ + +KARLVAKG+ QKEG+DYNE+FSPVVKH+SIR+LL +V + DLEL
Sbjct: 1371 VFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLEL 1430
Query: 166 EQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLLQKSLYGLKQSPRQWYKR 2
EQ+DVKTAFLHGELEE IYM+QPEG+ V GKE VCLL+KSLYGLKQSPRQWYKR
Sbjct: 1431 EQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQWYKR 1485
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 232 bits (591), Expect = 4e-67
Identities = 115/199 (57%), Positives = 146/199 (73%), Gaps = 11/199 (5%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFAL-----LTEVGEPSSYKEAIAADDSDRWVVAMESEME 401
R +R++ P RY E ++ A+AL + EPS+Y EAI +DD +RW+ AM EME
Sbjct: 989 RPKRNIKPPQRY-IEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEME 1047
Query: 400 SLDRNQTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEI 239
SL++N TW LV LPK + I C+W+F++K D YKARL+AKGY+Q G+D+N++
Sbjct: 1048 SLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDV 1107
Query: 238 FSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVC 59
FSPVVKH+SIR LL +V D ELEQMDVKTAFLHGELEE IYM+QP+G++V GKE VC
Sbjct: 1108 FSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVC 1167
Query: 58 LLQKSLYGLKQSPRQWYKR 2
L+KSLYGLKQSPRQWYKR
Sbjct: 1168 RLKKSLYGLKQSPRQWYKR 1186
>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
Length = 595
Score = 224 bits (572), Expect = 4e-67
Identities = 108/193 (55%), Positives = 147/193 (76%), Gaps = 6/193 (3%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFALLTEVGEPSSYKEAIAADDSDRWVVAMESEMESLDRN 386
+ R + P RYG+E D ++AL+T +P +++EAI + RW+ AM E++ L +N
Sbjct: 133 KPRRTIKPPTRYGFE--DLVSYALITSSKDPITFQEAIHNQEKSRWMGAMVEEIQFLHKN 190
Query: 385 QTWSLVDLPKGSRAIGCRWVFRKKDS------EHYKARLVAKGYAQKEGVDYNEIFSPVV 224
QTW LV+ P+G RAIGC+WV++KK++ E +KARLVAKGY+Q++GVDY+EIFSP+V
Sbjct: 191 QTWDLVEPPEGKRAIGCKWVYKKKEAISKKEGEKFKARLVAKGYSQRKGVDYDEIFSPMV 250
Query: 223 KHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLLQKS 44
+HTSIR +L +V FD++LEQMDV+T FLHG+LEE +YM QPEG+I G+E VC L+KS
Sbjct: 251 RHTSIRTVLGLVAHFDMQLEQMDVETTFLHGDLEELVYMVQPEGFIQPGQEHLVCKLRKS 310
Query: 43 LYGLKQSPRQWYK 5
LYGLKQSPRQWYK
Sbjct: 311 LYGLKQSPRQWYK 323
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 231 bits (590), Expect = 6e-67
Identities = 117/188 (62%), Positives = 141/188 (75%), Gaps = 8/188 (4%)
Frame = -1
Query: 541 PDRYGWEPSDYGAFALLTEV--GEPSSYKEAIAADDSDRWVVAMESEMESLDRNQTWSLV 368
P RYG+E A + EV EPS+YKEAI + DS++W AM EMESL +NQTW LV
Sbjct: 767 PTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLV 826
Query: 367 DLPKGSRAIGCRWVFRKKDS------EHYKARLVAKGYAQKEGVDYNEIFSPVVKHTSIR 206
P G + I C+WVF+KK+ YKAR+VA+G+ Q+EGVDYNEIFSPVV+HTSIR
Sbjct: 827 IQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIR 886
Query: 205 LLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLLQKSLYGLKQ 26
+LL +V +LELEQ+DVKTAFLHGELEE+IYM QP+G+ V GKE VC L+KSLYGLKQ
Sbjct: 887 VLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQ 946
Query: 25 SPRQWYKR 2
SPRQWYKR
Sbjct: 947 SPRQWYKR 954
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 228 bits (582), Expect = 3e-66
Identities = 113/197 (57%), Positives = 143/197 (72%), Gaps = 9/197 (4%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFALLTEVG---EPSSYKEAIAADDSDRWVVAMESEMESL 395
R+ R + P RY + A ++ EV EP+SY EA++ DS +W+VAM E+ESL
Sbjct: 478 RTRRQIKLPARYTDDNLTAYALSIAQEVNDDVEPASYSEAVSCVDSAKWLVAMNEEIESL 537
Query: 394 DRNQTWSLVDLPKGSRAIGCRWVFRKKDS------EHYKARLVAKGYAQKEGVDYNEIFS 233
+N TW+L LPKG R + C+W+++KKD KARLV KG+ QKEG+D+NEIFS
Sbjct: 538 HKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFS 597
Query: 232 PVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLL 53
PVV+HTSIR+LL V FDLELEQ+DVKTAFLHGELEE+IYM QPEG++V KE VC L
Sbjct: 598 PVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQL 657
Query: 52 QKSLYGLKQSPRQWYKR 2
+KSLYGLKQ+PRQWYK+
Sbjct: 658 KKSLYGLKQAPRQWYKK 674
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 229 bits (583), Expect = 5e-66
Identities = 115/199 (57%), Positives = 145/199 (72%), Gaps = 11/199 (5%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFAL-----LTEVGEPSSYKEAIAADDSDRWVVAMESEME 401
+ +R++ P RY E + A+AL + EPS+Y EAI +DD +RW+ AM EME
Sbjct: 754 KPKRNIKPPRRY-IEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEME 812
Query: 400 SLDRNQTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEI 239
SL++N TW LV LPK + I C+W+F++K D YKARLVAKGY+Q G+D+N++
Sbjct: 813 SLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDV 872
Query: 238 FSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVC 59
FSPVVKH+SIR LL +V D ELEQM+VKTAFLHGELEE IYM+QPEG++V GKE VC
Sbjct: 873 FSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVC 932
Query: 58 LLQKSLYGLKQSPRQWYKR 2
L+KSLYGLKQSPRQWYKR
Sbjct: 933 RLKKSLYGLKQSPRQWYKR 951
>gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 516
Score = 219 bits (559), Expect = 6e-66
Identities = 107/197 (54%), Positives = 140/197 (71%), Gaps = 9/197 (4%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFAL---LTEVGEPSSYKEAIAADDSDRWVVAMESEMESL 395
R R P RYG AF + L + EP SY EA+ + D + W+ AM+ EM SL
Sbjct: 310 RERRAHKAPQRYGHADLVSFAFTVGLDLEDHDEPKSYSEAMRSKDKNSWLKAMKEEMGSL 369
Query: 394 DRNQTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEIFS 233
++NQTW LVD PK + +G +W+F++K + +K RLVA+G+ Q+EG+DY EIFS
Sbjct: 370 EKNQTWILVDKPKEQKIVGSKWIFKRKKGILGIEKARFKERLVARGFTQREGLDYKEIFS 429
Query: 232 PVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLL 53
PVVKH SIR++L +V FD+ELEQMDV+TAFLHGEL+E IYMKQP+G+I +G E +VCLL
Sbjct: 430 PVVKHNSIRMILAMVTHFDMELEQMDVRTAFLHGELDETIYMKQPDGFIKEGTENQVCLL 489
Query: 52 QKSLYGLKQSPRQWYKR 2
++SLYGLKQSPR WYKR
Sbjct: 490 KRSLYGLKQSPRMWYKR 506
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 227 bits (579), Expect = 6e-66
Identities = 113/199 (56%), Positives = 144/199 (72%), Gaps = 11/199 (5%)
Frame = -1
Query: 565 RSERHVGHPDRYGWEPSDYGAFAL-----LTEVGEPSSYKEAIAADDSDRWVVAMESEME 401
+ +R++ P RY E ++ A+AL + EPS Y EAI +DD +RW+ M EME
Sbjct: 524 KPKRNIKPPRRY-IEEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEME 582
Query: 400 SLDRNQTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEI 239
SL++N TW LV LPK ++I C+W+F++K D YKARLVAKGY+Q +D+N++
Sbjct: 583 SLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDV 642
Query: 238 FSPVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVC 59
FSP+VKH+SIR LL +V D ELEQMDVKTAFLHGELEE IYM+QPEG++V GKE VC
Sbjct: 643 FSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVC 702
Query: 58 LLQKSLYGLKQSPRQWYKR 2
L+KSLYGLKQSPRQWYKR
Sbjct: 703 RLKKSLYGLKQSPRQWYKR 721
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 226 bits (576), Expect = 1e-65
Identities = 111/197 (56%), Positives = 147/197 (74%), Gaps = 10/197 (5%)
Frame = -1
Query: 562 SERHVGHPDRYGWEPSDYGAFALLT----EVGEPSSYKEAIAADDSDRWVVAMESEMESL 395
+ R + P R+G+ +D A++L EP +Y EAI+ DS +W+ AM+ E ESL
Sbjct: 427 ARRSIRPPQRFGY--NDMVAYSLSIGEELSCAEPKNYLEAISCKDSPKWMTAMQEEFESL 484
Query: 394 DRNQTWSLVDLPKGSRAIGCRWVFRKK------DSEHYKARLVAKGYAQKEGVDYNEIFS 233
+N TW LVD PKG + +GC+WVF+KK + E +KA LVAK Y Q+EG+D+NEIFS
Sbjct: 485 LKNGTWQLVDKPKGCKVVGCKWVFKKKLGIPHVEPERFKATLVAKAYTQREGMDFNEIFS 544
Query: 232 PVVKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLL 53
P+VKHTSIR+LL +V+ ++LEL QMDV AFLHGELEE+I+M+QP+G+IV GKE +VCLL
Sbjct: 545 PMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELEEEIFMQQPKGFIVKGKENQVCLL 604
Query: 52 QKSLYGLKQSPRQWYKR 2
++SLYGLKQSPRQWYKR
Sbjct: 605 KRSLYGLKQSPRQWYKR 621
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1256
Score = 228 bits (580), Expect = 1e-65
Identities = 112/195 (57%), Positives = 147/195 (75%), Gaps = 6/195 (3%)
Frame = -1
Query: 568 RRSERHVGHPDRYG-WEPSDYGAFALLTEVGEPSSYKEAIAADDSDRWVVAMESEMESLD 392
RR+ R P + + + + A+ LLTE GEPS+++EA+ + D +W+ AM E+E+L
Sbjct: 707 RRTTRQTKKPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAMHEEIEALH 766
Query: 391 RNQTWSLVDLPKGSRAIGCRWVFR-KKDS----EHYKARLVAKGYAQKEGVDYNEIFSPV 227
RN+TW LVDLPKG +AIGC+WV++ K+D E Y+ARLV KGYAQKEG+D+NEIFSPV
Sbjct: 767 RNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGYAQKEGIDFNEIFSPV 826
Query: 226 VKHTSIRLLLVVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGYIVDGKEQKVCLLQK 47
V+ T+IR++L + F+L LEQ+DVKTAFLHGEL+E+IYM QPEG+ GKE VC L K
Sbjct: 827 VRLTTIRVVLAMCAAFNLHLEQLDVKTAFLHGELQEEIYMLQPEGFKEQGKENLVCRLTK 886
Query: 46 SLYGLKQSPRQWYKR 2
SLYGLKQ+PR WYKR
Sbjct: 887 SLYGLKQAPRCWYKR 901