BLASTX nr result
ID: Ophiopogon27_contig00015952
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00015952
(1426 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA66368.1| Mediator of RNA polymerase II transcription subun... 176 2e-46
ref|XP_020685938.1| mediator of RNA polymerase II transcription ... 172 3e-45
ref|XP_009409986.1| PREDICTED: mediator of RNA polymerase II tra... 172 4e-45
ref|XP_013611601.1| PREDICTED: mediator of RNA polymerase II tra... 169 7e-44
gb|KFK24735.1| hypothetical protein AALP_AA8G017700 [Arabis alpina] 167 5e-43
ref|XP_013668306.1| mediator of RNA polymerase II transcription ... 166 6e-43
ref|XP_009122747.1| PREDICTED: mediator of RNA polymerase II tra... 166 6e-43
gb|OAY77700.1| Mediator of RNA polymerase II transcription subun... 166 7e-43
gb|AAP40461.1| unknown protein [Arabidopsis thaliana] 166 1e-42
ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein... 166 1e-42
ref|XP_020079979.1| mediator of RNA polymerase II transcription ... 166 2e-42
ref|XP_020582002.1| mediator of RNA polymerase II transcription ... 165 3e-42
ref|XP_012085966.1| mediator of RNA polymerase II transcription ... 164 3e-42
ref|XP_010490754.1| PREDICTED: mediator of RNA polymerase II tra... 164 4e-42
ref|XP_020582001.1| mediator of RNA polymerase II transcription ... 165 4e-42
ref|XP_010452148.1| PREDICTED: mediator of RNA polymerase II tra... 164 6e-42
ref|XP_018445522.1| PREDICTED: mediator of RNA polymerase II tra... 164 7e-42
ref|XP_010553019.1| PREDICTED: mediator of RNA polymerase II tra... 163 1e-41
ref|XP_020879558.1| mediator of RNA polymerase II transcription ... 163 1e-41
ref|XP_002322847.1| hydroxyproline-rich glycoprotein [Populus tr... 162 1e-41
>gb|PKA66368.1| Mediator of RNA polymerase II transcription subunit 4 [Apostasia
shenzhenica]
Length = 405
Score = 176 bits (445), Expect = 2e-46
Identities = 101/189 (53%), Positives = 123/189 (65%), Gaps = 17/189 (8%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS---TKEILSLFHSLQTQLFES 1086
F+V+P+RALW++A G TKE+LSLF SLQTQLFE+
Sbjct: 75 FEVTPHRALWASARAGGPPLFLPGAQSQPLSFDSRHPSQPTSTKEVLSLFTSLQTQLFEA 134
Query: 1085 VAELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEYQ------- 927
VAELQEILDLQDSK K+AR+++AKDSALLAF +K+ ++E VLDRL+DDY++Y+
Sbjct: 135 VAELQEILDLQDSKAKIAREVRAKDSALLAFTRKLHDAEQVLDRLLDDYSDYRRDPKRSR 194
Query: 926 ----DRDL---LHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRA 768
D D LH +LDLNE+LAYAH+ISYTTFAPPEH PQDNEMRA
Sbjct: 195 GEPGDPDYQSSLHSSLDLNEILAYAHRISYTTFAPPEHGAGLTPLRGALPPAPQDNEMRA 254
Query: 767 SQLYRFADL 741
SQLY ADL
Sbjct: 255 SQLYHLADL 263
>ref|XP_020685938.1| mediator of RNA polymerase II transcription subunit 4 [Dendrobium
catenatum]
gb|PKU84119.1| Mediator of RNA polymerase II transcription subunit 4 [Dendrobium
catenatum]
Length = 421
Score = 172 bits (437), Expect = 3e-45
Identities = 100/189 (52%), Positives = 119/189 (62%), Gaps = 17/189 (8%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS---TKEILSLFHSLQTQLFES 1086
F+VSP+RALW++A G TKE+LSLF S QTQLFES
Sbjct: 86 FEVSPHRALWASARAGGPPTFLPGAQSQPLSLDPRHPSPPTTTKEVLSLFTSFQTQLFES 145
Query: 1085 VAELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEYQD------ 924
VAELQEILDLQ+SK K+AR+I+ KDS LLAF +K+ E+E VLD L+DDY++Y+
Sbjct: 146 VAELQEILDLQESKLKIAREIRNKDSTLLAFTRKLHEAEQVLDHLLDDYSDYRRDPKRLK 205
Query: 923 --------RDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRA 768
+ LH +LDLNEVLAYAH+ISYTTFAPPEH PQDNEMRA
Sbjct: 206 GEPGEADYQSSLHSSLDLNEVLAYAHRISYTTFAPPEHGAGMAPLRGALPPAPQDNEMRA 265
Query: 767 SQLYRFADL 741
SQLY FADL
Sbjct: 266 SQLYHFADL 274
>ref|XP_009409986.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Musa acuminata subsp. malaccensis]
Length = 419
Score = 172 bits (436), Expect = 4e-45
Identities = 98/190 (51%), Positives = 123/190 (64%), Gaps = 18/190 (9%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS---TKEILSLFHSLQTQLFES 1086
FD+SP+R++W T+YRG TK+++SLF +LQTQLFE+
Sbjct: 86 FDLSPHRSVWLTSYRGNPPNFSKELNSSAAAATATAAPVPASTKDLMSLFTTLQTQLFEA 145
Query: 1085 VAELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY-------- 930
VAELQEILDLQD++ K+AR+I+AKDSALL+F KKI+E+E VLD L+DDY+ Y
Sbjct: 146 VAELQEILDLQDARVKVAREIRAKDSALLSFTKKIREAEQVLDHLIDDYSNYRRDPKRPR 205
Query: 929 --QDRD-----LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMR 771
QD + LH +LDL E+L+YAH+ISYTTFAPPEH PQDNEMR
Sbjct: 206 IEQDGESNYSMSLHSSLDLEEILSYAHRISYTTFAPPEHGAGLAPLRGALPPAPQDNEMR 265
Query: 770 ASQLYRFADL 741
ASQLY FADL
Sbjct: 266 ASQLYHFADL 275
>ref|XP_013611601.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Brassica oleracea var. oleracea]
ref|XP_013747655.1| mediator of RNA polymerase II transcription subunit 4-like [Brassica
napus]
Length = 421
Score = 169 bits (428), Expect = 7e-44
Identities = 99/189 (52%), Positives = 117/189 (61%), Gaps = 17/189 (8%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS--TKEILSLFHSLQTQLFESV 1083
FDVSPNRALW +A+RG+ TKEILS F+SLQTQLFE+V
Sbjct: 103 FDVSPNRALWLSAFRGSLPSFLTSSHSLPPPPPLEIPNPSSTKEILSQFNSLQTQLFEAV 162
Query: 1082 AELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY--------- 930
ELQEILDLQD+K KLAR+IK+KDS+LLAFA K+KE+E VLD LVDDY++Y
Sbjct: 163 TELQEILDLQDAKQKLAREIKSKDSSLLAFANKLKEAERVLDMLVDDYSDYRKPKRTKTE 222
Query: 929 ------QDRDLLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRA 768
+ + L L ++LAYAHKISYTTFAPPE PQD +MRA
Sbjct: 223 DEENDNESSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRA 282
Query: 767 SQLYRFADL 741
SQLY FADL
Sbjct: 283 SQLYAFADL 291
>gb|KFK24735.1| hypothetical protein AALP_AA8G017700 [Arabis alpina]
Length = 419
Score = 167 bits (422), Expect = 5e-43
Identities = 99/193 (51%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNRALW +++RG+ S TKEILS F+SLQTQLFESV
Sbjct: 97 FDVSPNRALWLSSFRGSLPSFLSSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFESVT 156
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY---------- 930
ELQEILDLQD+K K+AR++K+KDS+LLAFA K+KE+E VLD LVDDY++Y
Sbjct: 157 ELQEILDLQDAKQKIAREVKSKDSSLLAFANKLKEAERVLDMLVDDYSDYRKPKRSKTVI 216
Query: 929 --QDRDL--------LHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDN 780
+D D+ + L L ++LAYAHKISYTTFAPPE PQD
Sbjct: 217 EEEDNDIDSSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE 276
Query: 779 EMRASQLYRFADL 741
+MRAS LY FADL
Sbjct: 277 QMRASHLYTFADL 289
>ref|XP_013668306.1| mediator of RNA polymerase II transcription subunit 4-like [Brassica
napus]
Length = 420
Score = 166 bits (421), Expect = 6e-43
Identities = 101/192 (52%), Positives = 119/192 (61%), Gaps = 20/192 (10%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNRALW +A+RG+ S TKEILS F+SLQ QLFE+V
Sbjct: 100 FDVSPNRALWLSAFRGSLPSFLTSHSLPPPPPLEIPNPSSTKEILSQFNSLQMQLFEAVT 159
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY--------QD 924
ELQEILDLQD+K KLAR+IK+KDS+LLAFA K+KE+E VLD LVDDYA+Y +D
Sbjct: 160 ELQEILDLQDAKQKLAREIKSKDSSLLAFANKLKEAERVLDMLVDDYADYLKPKRTKTED 219
Query: 923 RD-----------LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNE 777
+ + L L ++LAYAHKISYTTFAPPE PQD +
Sbjct: 220 EENDNESSPSVTTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQ 279
Query: 776 MRASQLYRFADL 741
MRASQLY FADL
Sbjct: 280 MRASQLYAFADL 291
>ref|XP_009122747.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Brassica rapa]
Length = 420
Score = 166 bits (421), Expect = 6e-43
Identities = 101/192 (52%), Positives = 119/192 (61%), Gaps = 20/192 (10%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNRALW +A+RG+ S TKEILS F+SLQ QLFE+V
Sbjct: 100 FDVSPNRALWLSAFRGSLPSFLTSHSLPPPPPLEIPNPSSTKEILSQFNSLQMQLFEAVT 159
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY--------QD 924
ELQEILDLQD+K KLAR+IK+KDS+LLAFA K+KE+E VLD LVDDYA+Y +D
Sbjct: 160 ELQEILDLQDAKQKLAREIKSKDSSLLAFANKLKEAERVLDMLVDDYADYRKPKRTKTED 219
Query: 923 RD-----------LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNE 777
+ + L L ++LAYAHKISYTTFAPPE PQD +
Sbjct: 220 EENDNESSPSVTTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQ 279
Query: 776 MRASQLYRFADL 741
MRASQLY FADL
Sbjct: 280 MRASQLYAFADL 291
>gb|OAY77700.1| Mediator of RNA polymerase II transcription subunit 4 [Ananas
comosus]
Length = 393
Score = 166 bits (419), Expect = 7e-43
Identities = 97/190 (51%), Positives = 113/190 (59%), Gaps = 18/190 (9%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS--TKEILSLFHSLQTQLFESV 1083
FD SPNR W +YRG+ TKE+L+L SLQT LFESV
Sbjct: 53 FDASPNRPFWLASYRGSFPAFPPSSSSSSTASPTPISLPSSTKELLALATSLQTHLFESV 112
Query: 1082 AELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEYQDRDL---- 915
AELQEILDLQDS KLARD++AKD+ LLA A K +++ VLD+L+DDYA+Y+ R L
Sbjct: 113 AELQEILDLQDSAAKLARDVRAKDATLLALAHKTRDAHQVLDQLLDDYADYRRRPLKKAR 172
Query: 914 ------------LHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMR 771
L LDL E+LAYAH+ISYTTFAPPEH PQDNEMR
Sbjct: 173 ADAGAAPEPEFALRSGLDLQEILAYAHRISYTTFAPPEHGAGLAPLRGALPPAPQDNEMR 232
Query: 770 ASQLYRFADL 741
ASQLY FADL
Sbjct: 233 ASQLYHFADL 242
>gb|AAP40461.1| unknown protein [Arabidopsis thaliana]
Length = 426
Score = 166 bits (419), Expect = 1e-42
Identities = 99/193 (51%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNRA+W +A+RG+ S TKEILS F+SLQTQLFE+V
Sbjct: 101 FDVSPNRAIWLSAFRGSLPSFLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEAVT 160
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY---------- 930
ELQEILDLQD+K K+AR+IK+KDS+LLAFA K+K++E VLD LVDDY++Y
Sbjct: 161 ELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEE 220
Query: 929 --QDRD--------LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDN 780
+D D + L L ++LAYAHKISYTTFAPPE PQD
Sbjct: 221 DDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE 280
Query: 779 EMRASQLYRFADL 741
+MRASQLY FADL
Sbjct: 281 QMRASQLYTFADL 293
>ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
thaliana]
sp|Q9LZ00.1|MED4_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 4
emb|CAB86039.1| putative protein [Arabidopsis thaliana]
gb|AED90527.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
thaliana]
gb|OAO95949.1| hypothetical protein AXX17_AT5G02020 [Arabidopsis thaliana]
Length = 426
Score = 166 bits (419), Expect = 1e-42
Identities = 99/193 (51%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNRA+W +A+RG+ S TKEILS F+SLQTQLFE+V
Sbjct: 101 FDVSPNRAIWLSAFRGSLPSFLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEAVT 160
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY---------- 930
ELQEILDLQD+K K+AR+IK+KDS+LLAFA K+K++E VLD LVDDY++Y
Sbjct: 161 ELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEE 220
Query: 929 --QDRD--------LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDN 780
+D D + L L ++LAYAHKISYTTFAPPE PQD
Sbjct: 221 DDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDE 280
Query: 779 EMRASQLYRFADL 741
+MRASQLY FADL
Sbjct: 281 QMRASQLYTFADL 293
>ref|XP_020079979.1| mediator of RNA polymerase II transcription subunit 4 [Ananas
comosus]
Length = 439
Score = 166 bits (419), Expect = 2e-42
Identities = 97/190 (51%), Positives = 113/190 (59%), Gaps = 18/190 (9%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS--TKEILSLFHSLQTQLFESV 1083
FD SPNR W +YRG+ TKE+L+L SLQT LFESV
Sbjct: 99 FDASPNRPFWLASYRGSFPAFPPSSSSSSTASPTTISLPSSTKELLALATSLQTHLFESV 158
Query: 1082 AELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEYQDRDL---- 915
AELQEILDLQDS KLARD++AKD+ LLA A K +++ VLD+L+DDYA+Y+ R L
Sbjct: 159 AELQEILDLQDSAAKLARDVRAKDATLLALAHKTRDAHQVLDQLLDDYADYRRRPLKKAR 218
Query: 914 ------------LHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMR 771
L LDL E+LAYAH+ISYTTFAPPEH PQDNEMR
Sbjct: 219 ADAGAAPEPEFALRSGLDLQEILAYAHRISYTTFAPPEHGAGLAPLRGALPPAPQDNEMR 278
Query: 770 ASQLYRFADL 741
ASQLY FADL
Sbjct: 279 ASQLYHFADL 288
>ref|XP_020582002.1| mediator of RNA polymerase II transcription subunit 4 isoform X2
[Phalaenopsis equestris]
Length = 432
Score = 165 bits (417), Expect = 3e-42
Identities = 96/189 (50%), Positives = 119/189 (62%), Gaps = 17/189 (8%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS---TKEILSLFHSLQTQLFES 1086
F+VS +RALW++A G TKE+LSLF S QTQLFE+
Sbjct: 97 FEVSSHRALWASARSGGPPIFLSGAQSQPLSLDPRHPSPPTTTKEVLSLFTSFQTQLFEA 156
Query: 1085 VAELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEYQ------- 927
VAELQEILDLQDSK +AR+++ KD+ALL+F +K+ ++E VLDRL+DDY++Y+
Sbjct: 157 VAELQEILDLQDSKVNIAREVRNKDTALLSFTRKLHDAEQVLDRLLDDYSDYRRDPKRIK 216
Query: 926 ----DRDL---LHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRA 768
D D LH +LDLNE+LA AH+ISYTTFAPPEH PQDNEMRA
Sbjct: 217 GEPGDADYQSSLHSSLDLNEILALAHRISYTTFAPPEHGAGLAPLRGALPPAPQDNEMRA 276
Query: 767 SQLYRFADL 741
SQLY FADL
Sbjct: 277 SQLYHFADL 285
>ref|XP_012085966.1| mediator of RNA polymerase II transcription subunit 4 [Jatropha
curcas]
gb|KDP26214.1| hypothetical protein JCGZ_22460 [Jatropha curcas]
Length = 417
Score = 164 bits (416), Expect = 3e-42
Identities = 96/192 (50%), Positives = 123/192 (64%), Gaps = 20/192 (10%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
F+VSPNRA W +A+RG+ + TKE+LSLF SLQTQLFE+VA
Sbjct: 87 FEVSPNRAFWLSAFRGSLPTFLSSQTQSMAPPPLESTPTSTKEVLSLFTSLQTQLFEAVA 146
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY---------- 930
ELQEILDLQD+K +LAR+IK+KDSALL FA K+KE+E VLD LVDDY++Y
Sbjct: 147 ELQEILDLQDAKQRLAREIKSKDSALLNFANKLKEAERVLDMLVDDYSDYRRPKRAKSKL 206
Query: 929 -----QDRDL----LHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNE 777
+D D+ + L+L+++L+YAH+ISYTTFAPPE+ PQ+ +
Sbjct: 207 SADVPEDDDVSNTTVASQLELSDILSYAHRISYTTFAPPEYGAGQVPLRGALPPAPQEEQ 266
Query: 776 MRASQLYRFADL 741
MRASQLY FADL
Sbjct: 267 MRASQLYAFADL 278
>ref|XP_010490754.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Camelina sativa]
Length = 424
Score = 164 bits (416), Expect = 4e-42
Identities = 98/189 (51%), Positives = 119/189 (62%), Gaps = 17/189 (8%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNR LW +A+RG+ S TKEILS F+SLQTQLFE+V
Sbjct: 103 FDVSPNRPLWLSAFRGSLPSFLSSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFEAVT 162
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY---------- 930
ELQEILDLQD+K K+AR+IK+KDS+LLAFA K+K++E VLD LVDDY++Y
Sbjct: 163 ELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKTLT 222
Query: 929 ---QDRD---LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRA 768
++ D + L L ++LAYAHKISYTTFAPPE PQD +MRA
Sbjct: 223 DDEEEEDASTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRA 282
Query: 767 SQLYRFADL 741
SQLY FADL
Sbjct: 283 SQLYTFADL 291
>ref|XP_020582001.1| mediator of RNA polymerase II transcription subunit 4 isoform X1
[Phalaenopsis equestris]
Length = 448
Score = 165 bits (417), Expect = 4e-42
Identities = 96/189 (50%), Positives = 119/189 (62%), Gaps = 17/189 (8%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS---TKEILSLFHSLQTQLFES 1086
F+VS +RALW++A G TKE+LSLF S QTQLFE+
Sbjct: 97 FEVSSHRALWASARSGGPPIFLSGAQSQPLSLDPRHPSPPTTTKEVLSLFTSFQTQLFEA 156
Query: 1085 VAELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEYQ------- 927
VAELQEILDLQDSK +AR+++ KD+ALL+F +K+ ++E VLDRL+DDY++Y+
Sbjct: 157 VAELQEILDLQDSKVNIAREVRNKDTALLSFTRKLHDAEQVLDRLLDDYSDYRRDPKRIK 216
Query: 926 ----DRDL---LHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRA 768
D D LH +LDLNE+LA AH+ISYTTFAPPEH PQDNEMRA
Sbjct: 217 GEPGDADYQSSLHSSLDLNEILALAHRISYTTFAPPEHGAGLAPLRGALPPAPQDNEMRA 276
Query: 767 SQLYRFADL 741
SQLY FADL
Sbjct: 277 SQLYHFADL 285
>ref|XP_010452148.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Camelina sativa]
Length = 432
Score = 164 bits (415), Expect = 6e-42
Identities = 100/197 (50%), Positives = 120/197 (60%), Gaps = 25/197 (12%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNRALW +A+RG+ S TKEILS F+SLQTQLFE+V
Sbjct: 103 FDVSPNRALWLSAFRGSLPSFLSSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFEAVT 162
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY---------- 930
ELQEILDLQD+K K+AR+IK+KDS+LLAFA K+K++E VLD LVDDY++Y
Sbjct: 163 ELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKTLT 222
Query: 929 -------QDRD-------LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXX 792
+D D + L L ++LAYAHKISYTTFAPPE
Sbjct: 223 ESEKEEEEDDDNVTSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPA 282
Query: 791 PQDNEMRASQLYRFADL 741
PQD +MRASQLY FADL
Sbjct: 283 PQDEQMRASQLYTFADL 299
>ref|XP_018445522.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Raphanus sativus]
Length = 427
Score = 164 bits (414), Expect = 7e-42
Identities = 99/195 (50%), Positives = 118/195 (60%), Gaps = 23/195 (11%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS----TKEILSLFHSLQTQLFE 1089
FDVSPNRA W +A+RG+ TKEILS F+SLQTQLFE
Sbjct: 102 FDVSPNRAHWLSAFRGSLPSFLSSQHSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFE 161
Query: 1088 SVAELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY------- 930
+V ELQEILDLQD+K KLAR+IK+KDS+LLAFA K+KE+E VLD LVDDY++Y
Sbjct: 162 AVTELQEILDLQDAKQKLAREIKSKDSSLLAFANKLKEAERVLDMLVDDYSDYRKPKRTK 221
Query: 929 ---QDRD---------LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQ 786
+D D + + L ++LAYAHKISYTTFAPPE PQ
Sbjct: 222 TVTEDDDDDEESSSTTTVSSQIKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQ 281
Query: 785 DNEMRASQLYRFADL 741
D +MRASQLY FADL
Sbjct: 282 DEQMRASQLYAFADL 296
>ref|XP_010553019.1| PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Tarenaya hassleriana]
Length = 426
Score = 163 bits (413), Expect = 1e-41
Identities = 98/196 (50%), Positives = 121/196 (61%), Gaps = 24/196 (12%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNR+LW +A+RG+ S TKEILSLF+SLQTQLFE+V
Sbjct: 96 FDVSPNRSLWLSAFRGSLPSFLSSHSLQPPPPLENPNPSSTKEILSLFNSLQTQLFEAVT 155
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY---------- 930
ELQEILDLQD+K K+AR+IK+KD++LLAFA K+KE+E VLD LVDDY++Y
Sbjct: 156 ELQEILDLQDAKQKVAREIKSKDASLLAFANKLKEAERVLDMLVDDYSDYRRPKQARTGD 215
Query: 929 -----QDRD--------LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXP 789
+D D + L L ++L+YAH+ISYTTFAPPE P
Sbjct: 216 ESREEEDDDESSSSVNTTVASQLKLKDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAP 275
Query: 788 QDNEMRASQLYRFADL 741
QD +MRASQLY FADL
Sbjct: 276 QDEQMRASQLYNFADL 291
>ref|XP_020879558.1| mediator of RNA polymerase II transcription subunit 4 [Arabidopsis
lyrata subsp. lyrata]
gb|EFH47252.1| hypothetical protein ARALYDRAFT_487063 [Arabidopsis lyrata subsp.
lyrata]
Length = 428
Score = 163 bits (413), Expect = 1e-41
Identities = 98/194 (50%), Positives = 120/194 (61%), Gaps = 22/194 (11%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXS-TKEILSLFHSLQTQLFESVA 1080
FDVSPNRALW +A+RG+ S TKEILS F+SLQTQLFE+V
Sbjct: 101 FDVSPNRALWLSAFRGSLPSFLSSHSLPPPPPLENPNPSSTKEILSQFNSLQTQLFEAVT 160
Query: 1079 ELQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEY---------- 930
ELQEILDLQD+K K+AR+IK++DS+LLAFA K+K++E VLD LV+DY++Y
Sbjct: 161 ELQEILDLQDAKQKVAREIKSRDSSLLAFANKLKDAERVLDMLVEDYSDYRKPKRSKIVS 220
Query: 929 ---QDRD--------LLHPNLDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQD 783
+D D + L L ++LAYAHKISYTTFAPPE PQD
Sbjct: 221 EEEEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQD 280
Query: 782 NEMRASQLYRFADL 741
+MRASQLY FADL
Sbjct: 281 EQMRASQLYAFADL 294
>ref|XP_002322847.1| hydroxyproline-rich glycoprotein [Populus trichocarpa]
gb|PNS98565.1| hypothetical protein POPTR_016G084200v3 [Populus trichocarpa]
Length = 397
Score = 162 bits (410), Expect = 1e-41
Identities = 95/187 (50%), Positives = 117/187 (62%), Gaps = 15/187 (8%)
Frame = -3
Query: 1256 FDVSPNRALWSTAYRGAXXXXXXXXXXXXXXXXXXXXXSTKEILSLFHSLQTQLFESVAE 1077
F++SPNR W +AYRG TKEI+SLF SLQTQLFESVAE
Sbjct: 84 FELSPNRPHWLSAYRGTLPTFLPSQSQSLDEPTPTS---TKEIISLFTSLQTQLFESVAE 140
Query: 1076 LQEILDLQDSKNKLARDIKAKDSALLAFAKKIKESELVLDRLVDDYAEYQDRDLLHPN-- 903
LQEILDLQDSK +++++IK+KDSALL FA K+KE+E VLD LVDDYA+Y+ R + PN
Sbjct: 141 LQEILDLQDSKQRISQEIKSKDSALLNFANKLKEAERVLDILVDDYADYRRRRPIPPNEE 200
Query: 902 -------------LDLNEVLAYAHKISYTTFAPPEHXXXXXXXXXXXXXXPQDNEMRASQ 762
L L+++L+YAH+ISYTTFAPPE PQ+ +MRASQ
Sbjct: 201 EENATNTTTVASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQ 260
Query: 761 LYRFADL 741
LY FA L
Sbjct: 261 LYNFAHL 267