BLASTX nr result

ID: Ophiopogon27_contig00015861 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00015861
         (552 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010513200.1| PREDICTED: uncharacterized protein LOC104789...    58   2e-06
ref|XP_024010234.1| uncharacterized protein LOC112085266 [Eutrem...    56   1e-05

>ref|XP_010513200.1| PREDICTED: uncharacterized protein LOC104789161 [Camelina sativa]
          Length = 916

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
 Frame = +3

Query: 159 KVRKRCSKCEGYGHHISQCP------SIKCSSCDGYGHYDYQCPSKSQDVDIVPNDDINY 320
           K  ++C++CEG+GH+ S+CP      S++C  C GYGH  + CPS+           I +
Sbjct: 329 KQEQQCAECEGFGHYKSECPNNKRKSSLQCYGCKGYGHTKFDCPSRENK----QKSYITW 384

Query: 321 SEVVEDVHVLSEDTSDVMNDIVEFSAPILDEIDVPEDDTRDTK--HAIIESSTPSHDVEC 494
           SE   D  V   +  +V+N  +     I  E D  +D   +TK     ++S +   + + 
Sbjct: 385 SESDSDEEV---NKGEVLNSFLALLGVI--EEDEEDDVVLETKDLDEKVQSDSDGEEADL 439

Query: 495 SISKQ 509
           S+  Q
Sbjct: 440 SVEDQ 444


>ref|XP_024010234.1| uncharacterized protein LOC112085266 [Eutrema salsugineum]
          Length = 1360

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
 Frame = +3

Query: 171 RCSKCEGYGHHISQCP-----SIKCSSCDGYGHYDYQCPS--KSQDVDIVPNDDINYSEV 329
           +C +CEG+GH  S CP      +KC  C G+GH   +CP+  KS+D  ++  +D   SE 
Sbjct: 262 QCHECEGFGHFRSDCPLTKRKKLKCPECKGFGHTKSECPNALKSKDKSMIVFED---SES 318

Query: 330 VEDVHVLSEDTSDVMNDIVEFSAPILDEIDVPEDDT 437
            ++     ED  ++M + V F+A   ++   P  +T
Sbjct: 319 EDE----EEDNENLMLNFVAFTAEGKEQAQTPTTET 350


Top