BLASTX nr result

ID: Ophiopogon27_contig00015807 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00015807
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248378.1| probable transcription factor At5g61620 [Asp...    80   2e-15
gb|AIA59800.1| transcription factor MYB1R1 [Lycoris radiata]           63   4e-09

>ref|XP_020248378.1| probable transcription factor At5g61620 [Asparagus officinalis]
          Length = 277

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 60/130 (46%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   SSLFDVGINDNAA-APPTEAPFQLSPMSPMKVDFADRTANHQMNAQSMVTAPMVARVAEA 179
           SSLFD+GINDN A    TE P +LS     KVD A+R  N     QS V AP    VAE 
Sbjct: 132 SSLFDMGINDNNANLALTETPTELSSN---KVDDAERNNN-----QSQVNAPSFVGVAEP 183

Query: 180 SQPLTLATNNIGSPTLHSVNILGMSSRDQVNSRLYDNPATLSVTPDFLQLSLPNYVPVHE 359
            Q   +AT +  +   H  N    S  DQVNSRLY +  TL V  D LQL L N+ PV +
Sbjct: 184 LQAFIMATKDTNTSN-HKNNT---SFTDQVNSRLYASSTTLPVGSDILQLPLANF-PVQQ 238

Query: 360 PVTAPSVDSS 389
           P+  PSVD++
Sbjct: 239 PINFPSVDNN 248


>gb|AIA59800.1| transcription factor MYB1R1 [Lycoris radiata]
          Length = 277

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   SSLFDVGINDNAAAPPTEAPFQLSPMSPMKVDFADRTANHQMNAQSMVTAPMVARVAEAS 182
           SSLFDVGINDN      E           + D   R  N+ +  QS+     +A+VAE S
Sbjct: 138 SSLFDVGINDNKVDEVIE-----------RTDHQSRQ-NNLVRVQSLTVTSTMAQVAETS 185

Query: 183 QPLTLATNNIGSPTLHSVNILGMSSRDQVNSRLYDNPATLSVTPDFLQLSLPNYVPV-HE 359
              TL TNN   P LH V  LG S      S+L+    +L+   D LQ S  +Y+P+ H+
Sbjct: 186 HVSTLVTNNSCVPNLHGVTHLGGS------SKLHSESRSLAANSDILQHS-QHYIPIHHQ 238

Query: 360 PVTAPSVDSS 389
           P+ + S++++
Sbjct: 239 PIMSSSLENN 248


Top