BLASTX nr result

ID: Ophiopogon27_contig00015677 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00015677
         (740 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF25532.1| conserved hypothetical protein [Ricinus communis]...    74   2e-13
emb|CAN64513.1| hypothetical protein VITISV_004352 [Vitis vinifera]    67   4e-09
dbj|GAV61910.1| hypothetical protein CFOL_v3_05435, partial [Cep...    59   3e-08

>gb|EEF25532.1| conserved hypothetical protein [Ricinus communis]
 gb|EEF26949.1| conserved hypothetical protein [Ricinus communis]
          Length = 88

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 36/50 (72%), Positives = 43/50 (86%), Gaps = 2/50 (4%)
 Frame = +1

Query: 439 RAPALLAFFTGARQMYHSSRS*--GKESSVCFHYYGNELHMLVSNCSGIY 582
           ++ ALLAFFTGAR+MYHSSRS   GKESSVC++ YG+E HMLV NCSGI+
Sbjct: 39  KSSALLAFFTGARRMYHSSRSPRSGKESSVCYNLYGDESHMLVENCSGIH 88


>emb|CAN64513.1| hypothetical protein VITISV_004352 [Vitis vinifera]
          Length = 565

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = -2

Query: 112 SKPTAEQITDVGSESAGDSEKAAEQSVEGTQPTKCVP 2
           SKP AEQIT+VGSESAGD EKAAE SVEGTQPT+CVP
Sbjct: 451 SKPPAEQITEVGSESAGDPEKAAEHSVEGTQPTECVP 487


>dbj|GAV61910.1| hypothetical protein CFOL_v3_05435, partial [Cephalotus
           follicularis]
          Length = 41

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = +1

Query: 439 RAPALLAFFTGARQMYHSSRS*GKESSVCFHYYGNELHMLVSNCSGIY 582
           ++ ALLAFFTGAR+MYHSSR           +YGNE HMLV NCSGI+
Sbjct: 2   KSSALLAFFTGARRMYHSSRR--------IFFYGNESHMLVENCSGIH 41


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