BLASTX nr result

ID: Ophiopogon27_contig00015230 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00015230
         (403 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK79687.1| uncharacterized protein A4U43_C01F9020 [Asparagus...    54   5e-06
ref|XP_020241385.1| methyl-CpG-binding domain-containing protein...    54   5e-06

>gb|ONK79687.1| uncharacterized protein A4U43_C01F9020 [Asparagus officinalis]
          Length = 831

 Score = 54.3 bits (129), Expect(2) = 5e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +1

Query: 4   NGVTPVTRERKQRRRKGELASLPRRSLKRLAGLGAAPATDLVI 132
           N +TPVT+ERK R+ KG   ++PRRS KRLAGL   P T+LVI
Sbjct: 527 NEITPVTKERKLRKSKGASIAVPRRSSKRLAGLDPTPTTELVI 569



 Score = 23.5 bits (49), Expect(2) = 5e-06
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 194 PFAEPERMETVEEASLAEHLLL 259
           P AEPE   T+E AS  E  +L
Sbjct: 583 PSAEPETTNTIEAASQREQQVL 604


>ref|XP_020241385.1| methyl-CpG-binding domain-containing protein 13 [Asparagus
           officinalis]
          Length = 673

 Score = 54.3 bits (129), Expect(2) = 5e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +1

Query: 4   NGVTPVTRERKQRRRKGELASLPRRSLKRLAGLGAAPATDLVI 132
           N +TPVT+ERK R+ KG   ++PRRS KRLAGL   P T+LVI
Sbjct: 462 NEITPVTKERKLRKSKGASIAVPRRSSKRLAGLDPTPTTELVI 504



 Score = 23.5 bits (49), Expect(2) = 5e-06
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 194 PFAEPERMETVEEASLAEHLLL 259
           P AEPE   T+E AS  E  +L
Sbjct: 518 PSAEPETTNTIEAASQREQQVL 539


Top