BLASTX nr result

ID: Ophiopogon27_contig00014586 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00014586
         (375 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY72456.1| ABC transporter C family member 4 [Ananas comosus]      55   3e-06
ref|XP_020113775.1| ABC transporter C family member 14-like [Ana...    55   3e-06
ref|XP_020959532.1| ABC transporter C family member 4 isoform X2...    55   4e-06
ref|XP_016205191.1| ABC transporter C family member 4 isoform X1...    55   4e-06
ref|XP_015969000.1| ABC transporter C family member 4 [Arachis d...    55   4e-06

>gb|OAY72456.1| ABC transporter C family member 4 [Ananas comosus]
          Length = 858

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = -2

Query: 350 MTAPYLTSLSCTSPTSADPIQWIRFLALSPCPQR 249
           M +P+LTSL+C+ P S  P+QW+RFL LSPCPQR
Sbjct: 1   MVSPWLTSLACSPPPSTPPLQWLRFLFLSPCPQR 34


>ref|XP_020113775.1| ABC transporter C family member 14-like [Ananas comosus]
          Length = 1467

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = -2

Query: 350 MTAPYLTSLSCTSPTSADPIQWIRFLALSPCPQR 249
           M +P+LTSL+C+ P S  P+QW+RFL LSPCPQR
Sbjct: 1   MVSPWLTSLACSPPPSTPPLQWLRFLFLSPCPQR 34


>ref|XP_020959532.1| ABC transporter C family member 4 isoform X2 [Arachis ipaensis]
          Length = 1374

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
 Frame = -2

Query: 347 TAPYLTSLSCTSPTSADPI-QWIRFLALSPCPQR 249
           TAP++TSLSC SPTS D + QW+RF+ LSPCPQR
Sbjct: 6   TAPWITSLSCASPTSGDTLPQWLRFIFLSPCPQR 39


>ref|XP_016205191.1| ABC transporter C family member 4 isoform X1 [Arachis ipaensis]
 ref|XP_016205192.1| ABC transporter C family member 4 isoform X1 [Arachis ipaensis]
 ref|XP_016205193.1| ABC transporter C family member 4 isoform X1 [Arachis ipaensis]
          Length = 1507

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
 Frame = -2

Query: 347 TAPYLTSLSCTSPTSADPI-QWIRFLALSPCPQR 249
           TAP++TSLSC SPTS D + QW+RF+ LSPCPQR
Sbjct: 6   TAPWITSLSCASPTSGDTLPQWLRFIFLSPCPQR 39


>ref|XP_015969000.1| ABC transporter C family member 4 [Arachis duranensis]
 ref|XP_015969001.1| ABC transporter C family member 4 [Arachis duranensis]
 ref|XP_015969002.1| ABC transporter C family member 4 [Arachis duranensis]
          Length = 1508

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
 Frame = -2

Query: 347 TAPYLTSLSCTSPTSADPI-QWIRFLALSPCPQR 249
           TAP++TSLSC SPTS D + QW+RF+ LSPCPQR
Sbjct: 6   TAPWITSLSCASPTSGDTLPQWLRFIFLSPCPQR 39


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