BLASTX nr result
ID: Ophiopogon27_contig00014396
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00014396
(555 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020683453.1| mediator of RNA polymerase II transcription ... 70 1e-10
ref|XP_020576498.1| mediator of RNA polymerase II transcription ... 65 7e-09
ref|XP_008788456.1| PREDICTED: mediator of RNA polymerase II tra... 65 7e-09
ref|XP_010932618.1| PREDICTED: mediator of RNA polymerase II tra... 65 9e-09
ref|XP_008800753.1| PREDICTED: mediator of RNA polymerase II tra... 65 9e-09
ref|XP_020247930.1| mediator of RNA polymerase II transcription ... 64 1e-08
ref|XP_020247929.1| mediator of RNA polymerase II transcription ... 64 1e-08
ref|XP_010909256.1| PREDICTED: mediator of RNA polymerase II tra... 64 2e-08
ref|XP_010909253.1| PREDICTED: mediator of RNA polymerase II tra... 64 2e-08
ref|XP_009403099.1| PREDICTED: mediator of RNA polymerase II tra... 63 4e-08
ref|XP_009401431.1| PREDICTED: mediator of RNA polymerase II tra... 60 5e-07
gb|PKA61335.1| Mediator of RNA polymerase II transcription subun... 59 9e-07
>ref|XP_020683453.1| mediator of RNA polymerase II transcription subunit 14 [Dendrobium
catenatum]
gb|PKU84972.1| Mediator of RNA polymerase II transcription subunit 14 [Dendrobium
catenatum]
Length = 1811
Score = 70.1 bits (170), Expect = 1e-10
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NGNS+GDI QGRL+LVAE+LQRTLQ SLQQLRDGS+SSG++ T
Sbjct: 1769 NGNSLGDISQGRLRLVAESLQRTLQASLQQLRDGSVSSGSSLT 1811
>ref|XP_020576498.1| mediator of RNA polymerase II transcription subunit 14 [Phalaenopsis
equestris]
Length = 1817
Score = 65.1 bits (157), Expect = 7e-09
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NG+SVGDI QGRL+LVAE LQRTLQ SLQQLR+GS+SS A T
Sbjct: 1775 NGSSVGDISQGRLRLVAEALQRTLQASLQQLREGSLSSAAAMT 1817
>ref|XP_008788456.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Phoenix dactylifera]
ref|XP_008788457.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Phoenix dactylifera]
Length = 1833
Score = 65.1 bits (157), Expect = 7e-09
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NGNS GD+ QGRL+LVAE +QR L VSLQQLRDG++SSG+T +
Sbjct: 1791 NGNSAGDVSQGRLRLVAETVQRKLDVSLQQLRDGALSSGSTAS 1833
>ref|XP_010932618.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Elaeis guineensis]
Length = 1825
Score = 64.7 bits (156), Expect = 9e-09
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NG+S GD+ QGRL+LVAE +QRTL VSLQQLRDG++SS +T T
Sbjct: 1783 NGSSAGDVSQGRLRLVAETVQRTLHVSLQQLRDGALSSSSTAT 1825
>ref|XP_008800753.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Phoenix dactylifera]
Length = 1832
Score = 64.7 bits (156), Expect = 9e-09
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NG+S GD+ QGRL+LVAE +QRTL VSLQQLRDG++SS +T T
Sbjct: 1790 NGSSAGDVSQGRLRLVAETVQRTLHVSLQQLRDGALSSSSTAT 1832
>ref|XP_020247930.1| mediator of RNA polymerase II transcription subunit 14 isoform X2
[Asparagus officinalis]
gb|ONK56822.1| uncharacterized protein A4U43_C10F13360 [Asparagus officinalis]
Length = 1742
Score = 64.3 bits (155), Expect = 1e-08
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NGNS GD+ QGRL+LVA+ LQ+TLQ+ LQQLRDGS+SS + GT
Sbjct: 1700 NGNSAGDVNQGRLRLVADALQKTLQLLLQQLRDGSLSSASIGT 1742
>ref|XP_020247929.1| mediator of RNA polymerase II transcription subunit 14 isoform X1
[Asparagus officinalis]
Length = 1755
Score = 64.3 bits (155), Expect = 1e-08
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NGNS GD+ QGRL+LVA+ LQ+TLQ+ LQQLRDGS+SS + GT
Sbjct: 1713 NGNSAGDVNQGRLRLVADALQKTLQLLLQQLRDGSLSSASIGT 1755
>ref|XP_010909256.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like isoform X2 [Elaeis guineensis]
Length = 1800
Score = 63.5 bits (153), Expect = 2e-08
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGAT 432
NGNS GD+ QGRL+LVAE +QRTL VSLQQLRDG+++S +T
Sbjct: 1758 NGNSAGDVSQGRLRLVAETVQRTLHVSLQQLRDGALTSSST 1798
>ref|XP_010909253.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like isoform X1 [Elaeis guineensis]
ref|XP_010909254.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like isoform X1 [Elaeis guineensis]
Length = 1828
Score = 63.5 bits (153), Expect = 2e-08
Identities = 29/41 (70%), Positives = 36/41 (87%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGAT 432
NGNS GD+ QGRL+LVAE +QRTL VSLQQLRDG+++S +T
Sbjct: 1786 NGNSAGDVSQGRLRLVAETVQRTLHVSLQQLRDGALTSSST 1826
>ref|XP_009403099.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Musa acuminata subsp. malaccensis]
Length = 1804
Score = 62.8 bits (151), Expect = 4e-08
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NGNS GD QGRL+LVA+ LQRTLQV+LQQLRD S+SS + GT
Sbjct: 1762 NGNSAGDASQGRLRLVADALQRTLQVALQQLRDCSLSSSSIGT 1804
>ref|XP_009401431.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Musa acuminata subsp. malaccensis]
Length = 1815
Score = 59.7 bits (143), Expect = 5e-07
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGSISSGATGT 426
NGNS D+ QGRL+LVA+ LQRTLQ+ LQQLRDG++ ++GT
Sbjct: 1773 NGNSAADVSQGRLRLVADTLQRTLQMLLQQLRDGAVPLSSSGT 1815
>gb|PKA61335.1| Mediator of RNA polymerase II transcription subunit 14 [Apostasia
shenzhenica]
Length = 1811
Score = 58.9 bits (141), Expect = 9e-07
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = -2
Query: 554 NGNSVGDIGQGRLKLVAENLQRTLQVSLQQLRDGS 450
NGNS+GD+ QGRLKLV E LQ+TLQ SLQQLRDGS
Sbjct: 1776 NGNSMGDLTQGRLKLVVETLQKTLQASLQQLRDGS 1810