BLASTX nr result

ID: Ophiopogon27_contig00014308 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00014308
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA56334.1| Protein trigalactosyldiacylglycerol 1, chloroplas...    59   2e-07
ref|XP_009384466.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...    54   9e-06
ref|XP_008787064.2| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCER...    54   9e-06
gb|PKU79651.1| Asparagine--tRNA ligase, chloroplastic/mitochondr...    54   1e-05

>gb|PKA56334.1| Protein trigalactosyldiacylglycerol 1, chloroplastic [Apostasia
           shenzhenica]
          Length = 351

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 33/60 (55%), Positives = 35/60 (58%)
 Frame = +2

Query: 209 LCHSNPITQITNNAXXXXXXXXXXXXXXXXXLFSNWTPPRPLWRALSVLFLAGQVIHRAI 388
           LCH  P  Q TNNA                 + SNW+PPRPLWR LSVL LAGQVIHRAI
Sbjct: 67  LCHLLP-EQTTNNAPFPLPQPAA--------MLSNWSPPRPLWRGLSVLVLAGQVIHRAI 117


>ref|XP_009384466.1| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic
           [Musa acuminata subsp. malaccensis]
          Length = 333

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
 Frame = +2

Query: 137 PTSLNPIINPRLRTKPPTGILSRSLCHSNPITQ-----ITNNAXXXXXXXXXXXXXXXXX 301
           P+S +P+++P+     P  I  R+L     +       ITNNA                 
Sbjct: 13  PSSSSPLLSPKNPQIIPKVIPRRTLIFRRTVRLSLSHGITNNAPEPAPETAPAPAPAP-- 70

Query: 302 LFSNWTPPRPLWRALSVLFLAGQVIHRAI 388
           LFS+WTPP+PLWR LS L LAGQV  RA+
Sbjct: 71  LFSSWTPPQPLWRGLSALILAGQVARRAL 99


>ref|XP_008787064.2| PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic
           [Phoenix dactylifera]
          Length = 351

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 40/103 (38%), Positives = 48/103 (46%), Gaps = 21/103 (20%)
 Frame = +2

Query: 143 SLNPIINPR---------LRTKPPTGI---LSRSLCH---------SNPITQITNNAXXX 259
           SL P +NP+         L+T   T I   LS S+C+         S P    TNNA   
Sbjct: 25  SLRPTLNPKKKRSRWRSQLKTPNSTLIHRHLSSSICNPKRLNFLCLSVPEELTTNNAPES 84

Query: 260 XXXXXXXXXXXXXXLFSNWTPPRPLWRALSVLFLAGQVIHRAI 388
                         LFS WTPPRPLWR LS L +AGQV+ RA+
Sbjct: 85  EPEP----------LFSRWTPPRPLWRGLSALVIAGQVVRRAL 117


>gb|PKU79651.1| Asparagine--tRNA ligase, chloroplastic/mitochondrial [Dendrobium
           catenatum]
          Length = 714

 Score = 53.9 bits (128), Expect = 1e-05
 Identities = 31/61 (50%), Positives = 35/61 (57%)
 Frame = +2

Query: 206 SLCHSNPITQITNNAXXXXXXXXXXXXXXXXXLFSNWTPPRPLWRALSVLFLAGQVIHRA 385
           S+ HS P  QITNNA                 L +NWTPPR LWR +S L LAGQVIHRA
Sbjct: 427 SVPHSLP-EQITNNAPETSPAPSPPP------LLANWTPPRTLWRGISALILAGQVIHRA 479

Query: 386 I 388
           +
Sbjct: 480 L 480


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